prot_L-elsbetiae_contig15068.3634.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig15068.3634.1
Unique Name	prot_L-elsbetiae_contig15068.3634.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	126

Homology

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BLAST of mRNA_L-elsbetiae_contig15068.3634.1 vs. uniprot
Match: D7FJZ9_ECTSI (Putative c-myb-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ9_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 2.540e-58
Identity = 97/118 (82.20%), Postives = 98/118 (83.05%), Query Frame = 0

Query:    1 WSDLARHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVKNRFNLIQRRNKRAQGSPTTXXXXXXXTAS-----------DLKPIRRGR 107
            WSDLARHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDV+NRFNLIQRRNKRAQGSPTT       TA             LKPIRRGR
Sbjct:  318 WSDLARHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVQNRFNLIQRRNKRAQGSPTTTTTAPPATAQLAPLPTPAPVPSLKPIRRGR 435

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BLAST of mRNA_L-elsbetiae_contig15068.3634.1 vs. uniprot
Match: A0A6H5JMK3_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMK3_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 4.630e-54
Identity = 95/118 (80.51%), Postives = 96/118 (81.36%), Query Frame = 0

Query:    1 WSDLARHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVKNRFNLIQRRNKRAQGSPTTXXXXXXXTASD-----------LKPIRRGR 107
            WSDLA+HIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVKNRFNLIQRRNKRAQGSPT        T              LKPIRRGR
Sbjct: 1056 WSDLAKHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVKNRFNLIQRRNKRAQGSPTITTTAPPATPQXXXXXXXXXXXXLKPIRRGR 1173

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BLAST of mRNA_L-elsbetiae_contig15068.3634.1 vs. uniprot
Match: A0A836CND7_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CND7_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.040e-33
Identity = 58/82 (70.73%), Postives = 69/82 (84.15%), Query Frame = 0

Query:    1 WSDLARHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVKNRFNLIQRRNKRA 82
            W+ +AR +PGR+AKQCRERYLNHLDP L++  PWT +EE +L+RLC  +  QWAEICRQL GRSYNDVKNR+NLIQRR KRA
Sbjct:   42 WALVARSMPGRVAKQCRERYLNHLDPKLQRG-PWTPEEEQVLLRLCEGQNRQWAEICRQLPGRSYNDVKNRYNLIQRRLKRA 122

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BLAST of mRNA_L-elsbetiae_contig15068.3634.1 vs. uniprot
Match: A0A835Z4W2_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W2_9STRA)

HSP 1 Score: 105 bits (262), Expect = 2.110e-27
Identity = 47/78 (60.26%), Postives = 61/78 (78.21%), Query Frame = 0

Query:    1 WSDLARHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVKNRFNLIQRR 78
            W+++++H+PGR AKQCRERY+NHLDPSLRK  PWT +EEA L+  C      WAE+ R+  GRSYNDVKNR+ L++RR
Sbjct:    1 WAEISKHLPGRDAKQCRERYINHLDPSLRK-APWTPEEEAALVAHCRETNCHWAEVWRRFPGRSYNDVKNRYYLLERR 77

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BLAST of mRNA_L-elsbetiae_contig15068.3634.1 vs. uniprot
Match: A0A835YSH7_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSH7_9STRA)

HSP 1 Score: 106 bits (264), Expect = 9.050e-27
Identity = 49/78 (62.82%), Postives = 59/78 (75.64%), Query Frame = 0

Query:    1 WSDLARHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVKNRFNLIQRR 78
            W+ +  H+PGR+ KQCRERYLNHLDPSL+K  PWT +E+ALL  L     N WA+I RQ+ GR  NDVKNR+NLIQRR
Sbjct:   78 WAQICMHMPGRVGKQCRERYLNHLDPSLKKT-PWTPEEDALLTELHTKMNNSWADIARQMPGRCDNDVKNRWNLIQRR 154

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BLAST of mRNA_L-elsbetiae_contig15068.3634.1 vs. uniprot
Match: D7G0Z5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z5_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 2.620e-26
Identity = 62/123 (50.41%), Postives = 79/123 (64.23%), Query Frame = 0

Query:    1 WSDLARHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVKNRFNLIQRRNKRAQGSPTTXXXXXXXT-ASDLKPIRRGRGSTPLAVNASAAAPP 122
            WS ++ H+PGR+ KQCRERYLNHLDPSLR   PWTE+EE LL+ L     NQWAEI RQ+ GRS NDVKNR+NL+ RR + A+ +          T A+ + P+       P++  AS  APP
Sbjct:  649 WSQISDHMPGRVGKQCRERYLNHLDPSLRHG-PWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEKNLHRAGSSGSATSAASVPPL-------PVSATASGGAPP 763

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BLAST of mRNA_L-elsbetiae_contig15068.3634.1 vs. uniprot
Match: A0A6H5L2W7_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W7_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 4.960e-26
Identity = 53/83 (63.86%), Postives = 64/83 (77.11%), Query Frame = 0

Query:    1 WSDLARHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVKNRFNLIQRRNKRAQ 83
            WS ++ H+PGR+ KQCRERYLNHLDPSLR   PWTE+EE LL+ L     NQWAEI RQ+ GRS NDVKNR+NL+ RR + A+
Sbjct: 1037 WSQISDHMPGRVGKQCRERYLNHLDPSLRHG-PWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAE 1118

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BLAST of mRNA_L-elsbetiae_contig15068.3634.1 vs. uniprot
Match: D8LH85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH85_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 6.160e-21
Identity = 43/78 (55.13%), Postives = 59/78 (75.64%), Query Frame = 0

Query:    1 WSDLARHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVKNRFNLIQRR 78
            W+ +A  +PGR AKQCRERY NH+DP ++KD  WT +E+AL+M+L     NQ+A+I R + GR Y+DVKNRFNL+ +R
Sbjct:  521 WAKIAEVMPGRTAKQCRERYNNHVDPGIKKDKIWTAEEDALVMQLHAEHHNQFAKIARNIPGRCYDDVKNRFNLLVKR 598

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BLAST of mRNA_L-elsbetiae_contig15068.3634.1 vs. uniprot
Match: D2V9F0_NAEGR (Predicted protein (Fragment) n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V9F0_NAEGR)

HSP 1 Score: 90.5 bits (223), Expect = 1.120e-20
Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 0

Query:    1 WSDLARHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVKNRFNLIQRRNKR 81
            WS +A H+PGRI KQCRER+ NHLDPS++K+ PWTE+EE LL+       N+WAEI + + GR+ N  KN FN +  R K+
Sbjct:   66 WSMIASHLPGRIGKQCRERWYNHLDPSIKKE-PWTEEEETLLLDAQSKLGNKWAEISKLIVGRTDNACKNHFNSLIAREKK 145

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BLAST of mRNA_L-elsbetiae_contig15068.3634.1 vs. uniprot
Match: A0A1E7EVM5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EVM5_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.630e-20
Identity = 43/79 (54.43%), Postives = 58/79 (73.42%), Query Frame = 0

Query:    1 WSDLARHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVKNR-FNLIQRR 78
            W+ +A H+PGR  KQCRER++NHLDP L+K   WT+DEEA+L+ +     N+WA I +QL GRS NDVKN  ++ IQR+
Sbjct:   54 WAKIAAHLPGRQGKQCRERFVNHLDPELKKG-EWTDDEEAILIAMHELHGNRWANISKQLPGRSDNDVKNHWYSTIQRK 131

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig15068.3634.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig15068.3634.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FJZ9_ECTSI	2.540e-58	82.20	Putative c-myb-like transcription factor n=1 Tax=E...	[more]
A0A6H5JMK3_9PHAE	4.630e-54	80.51	MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
A0A836CND7_9STRA	1.040e-33	70.73	Homeodomain-like protein n=1 Tax=Tribonema minus T...	[more]
A0A835Z4W2_9STRA	2.110e-27	60.26	Homeodomain-like protein (Fragment) n=1 Tax=Tribon...	[more]
A0A835YSH7_9STRA	9.050e-27	62.82	Homeodomain-like protein (Fragment) n=1 Tax=Tribon...	[more]
D7G0Z5_ECTSI	2.620e-26	50.41	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L2W7_9PHAE	4.960e-26	63.86	MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
D8LH85_ECTSI	6.160e-21	55.13	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D2V9F0_NAEGR	1.120e-20	53.09	Predicted protein (Fragment) n=1 Tax=Naegleria gru...	[more]
A0A1E7EVM5_9STRA	1.630e-20	54.43	Uncharacterized protein (Fragment) n=1 Tax=Fragila...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 30..78 e-value: 6.1E-8 score: 42.4
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 32..73 e-value: 6.1E-9 score: 35.9
None	No IPR available	GENE3D	1.10.10.60		coord: 32..92 e-value: 1.2E-12 score: 49.5
None	No IPR available	GENE3D	1.10.10.60		coord: 1..30 e-value: 7.0E-11 score: 43.8
None	No IPR available	PANTHER	PTHR45614:SF1	MYB PROTEIN	coord: 1..80
IPR015495	Myb-like transcription factor	PANTHER	PTHR45614	FAMILY NOT NAMED	coord: 1..80
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..28 score: 15.906
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 29..80 score: 8.754
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 5..83

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig15068	contig	L-elsbetiae_contig15068:499..1437 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig15068.3634.1	mRNA_L-elsbetiae_contig15068.3634.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig15068 499..1438 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig15068.3634.1 ID=prot_L-elsbetiae_contig15068.3634.1|Name=mRNA_L-elsbetiae_contig15068.3634.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=126bp
WSDLARHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQ
NQWAEICRQLHGRSYNDVKNRFNLIQRRNKRAQGSPTTPSTPATPTASDL
KPIRRGRGSTPLAVNASAAAPPVAAA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR015495	Myb-like_TF
IPR017930	Myb_dom
IPR009057	Homeobox-like_sf