prot_L-elsbetiae_contig15004.3604.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15004.3604.1
Unique Nameprot_L-elsbetiae_contig15004.3604.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length158
Homology
BLAST of mRNA_L-elsbetiae_contig15004.3604.1 vs. uniprot
Match: D8LMZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ6_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 5.680e-30
Identity = 80/168 (47.62%), Postives = 92/168 (54.76%), Query Frame = 0
Query:    1 DVLSAPTVDQVDVGSCVEVRHDGENAQTVRHRY-------NDGAAGASSSVGASAFAXXXXXXXXXXAKVAETTMTFDRVLK---GERGGYRRKLSFGP-RASHGCIYRHNHKARTPSHIANPKARRPTRARKDPILANTRWPPPVVVRACDRTEQRRAFSLEHSVLA 157
            DVL  PT DQVD+GS V V     N +   H++                 V AS              +    T+ F+  L    G RG  RR LS G  +ASH CIYRH HK RTPS +ANPKARRP +A  DPILANTRWPPPV V A +RTEQR A+SLEHS LA
Sbjct:  839 DVLRTPTEDQVDIGSSVVVGGGKGNVRKAPHKHAGXXXXXXXXXXXXXXGVPASPPRRRVRSTGDAARRAGTGTLGFEETLAPKGGRRGSVRRGLSRGDTQASHACIYRHKHKGRTPSRVANPKARRPVQAAHDPILANTRWPPPVDVPAQERTEQRSAYSLEHSFLA 1006          
BLAST of mRNA_L-elsbetiae_contig15004.3604.1 vs. uniprot
Match: A0A6H5JPQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPQ9_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 1.730e-24
Identity = 53/83 (63.86%), Postives = 59/83 (71.08%), Query Frame = 0
Query:   75 KGERGGYRRKLSFGPRASHGCIYRHNHKARTPSHIANPKARRPTRARKDPILANTRWPPPVVVRACDRTEQRRAFSLEHSVLA 157
            +  RGG  R    G + SH CIYRH  K RTPS +ANPKARRP +A  DPILAN RWPPPV V A +RTEQR A+SLEHS LA
Sbjct:   10 RAARGGLSRG---GTQVSHACIYRHKLKGRTPSRVANPKARRPVQAAHDPILANIRWPPPVDVPAQERTEQRSAYSLEHSSLA 89          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15004.3604.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMZ6_ECTSI5.680e-3047.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPQ9_9PHAE1.730e-2463.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15004contigL-elsbetiae_contig15004:1003..2648 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15004.3604.1mRNA_L-elsbetiae_contig15004.3604.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15004 1003..3397 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15004.3604.1 ID=prot_L-elsbetiae_contig15004.3604.1|Name=mRNA_L-elsbetiae_contig15004.3604.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=158bp
DVLSAPTVDQVDVGSCVEVRHDGENAQTVRHRYNDGAAGASSSVGASAFA
GGTASSAAAAAKVAETTMTFDRVLKGERGGYRRKLSFGPRASHGCIYRHN
HKARTPSHIANPKARRPTRARKDPILANTRWPPPVVVRACDRTEQRRAFS
LEHSVLA*
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