prot_L-elsbetiae_contig15.3594.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15.3594.1
Unique Nameprot_L-elsbetiae_contig15.3594.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length323
Homology
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BLAST of mRNA_L-elsbetiae_contig15.3594.1 vs. uniprot
Match: A0A6H5JYH5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYH5_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 1.130e-54
Identity = 215/321 (66.98%), Postives = 241/321 (75.08%), Query Frame = 0 
Query:    1 MESNRASDVLSVVVLSGVARSAEIELVCLAACNACRENGADYSLVVDTGNIDLVRSSASTQEEETPPSSGCTSASTSINNYGRSAVSSPAVPSPPSAPVTVCSRIMPHRRIHSLALRLDLPLSQLIWPEQLRVLKFGWMFDHPLDRPLPGSLINLDLGNAFNHHIEEVAWP---AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNWAGAPNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQELQARELPRGLRLLRLPDVYAMHDTFEPEGLPRGCKLRIDRTEMFD 318
            MES RA+ VL VVVLSGV   AE+ELVCL+ CNACRE+  +YS+VV   N+ LV  S S +++E   SS        IN       S  AVP  P+      SR++PHRRI  LA R+DLPLSQ++WPE LR LKFGW FDHPLD PLP SLI+L LG  FNHHIE V WP   A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     A NL   XXXXXXXXXXXXXXXXXXXXXXXXXXXXDQ+L A +LPRGLRLLR+PDV    DTFEP+ LP+ CK+RI RT++F+
Sbjct:    1 MESTRAAGVLRVVVLSGVVWPAEVELVCLSICNACRESSTNYSMVVTAKNVRLV--SPSRRQDEGGASSPLPLCGGDIN-------SDSAVPVIPAEN----SRVLPHRRISRLAFRVDLPLSQVVWPEGLRGLKFGWRFDHPLDHPLPDSLIDLHLGGTFNHHIEGVTWPPRLAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSATNLKILXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQQLFASQLPRGLRLLRIPDVC---DTFEPDDLPKDCKVRIYRTDIFE 305
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15.3594.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JYH5_9PHAE1.130e-5466.98Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 110..294
e-value: 9.6E-6
score: 26.2
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 119..247
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 119..247
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..322
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 129..278

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15contigL-elsbetiae_contig15:84513..85481 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15.3594.1mRNA_L-elsbetiae_contig15.3594.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15 84111..86806 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15.3594.1 ID=prot_L-elsbetiae_contig15.3594.1|Name=mRNA_L-elsbetiae_contig15.3594.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=323bp
MESNRASDVLSVVVLSGVARSAEIELVCLAACNACRENGADYSLVVDTGN
IDLVRSSASTQEEETPPSSGCTSASTSINNYGRSAVSSPAVPSPPSAPVT
VCSRIMPHRRIHSLALRLDLPLSQLIWPEQLRVLKFGWMFDHPLDRPLPG
SLINLDLGNAFNHHIEEVAWPATLQSLTFGDRFNRQVELAVWPATLRRLS
FGSSFDQPIARVLWPPSLEELHLGDAFNHPVNWAGAPNLKRLEFGTAFRC
AVDGIEWPKGLRELKFGACFDQELQARELPRGLRLLRLPDVYAMHDTFEP
EGLPRGCKLRIDRTEMFDLLLY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf