prot_L-elsbetiae_contig1498.3570.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1498.3570.1
Unique Nameprot_L-elsbetiae_contig1498.3570.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length534
Homology
BLAST of mRNA_L-elsbetiae_contig1498.3570.1 vs. uniprot
Match: D8LHR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHR4_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 1.300e-20
Identity = 74/173 (42.77%), Postives = 89/173 (51.45%), Query Frame = 0
Query:  152 LPGPKDSN--ALASREKGGGRALCFEEEGQGQEAAEED-------QEKRFF--SLRTS-------------------ISNVSSAPSEPVDIPGARSVREDSGTRNPTGVPSANSLQEEGWVSLWNTYTRLFPGTFIGCSPPDSQPPPDSPLYASSP---------PKRRNASS 285
            +PG ++ N   + SR     RALCF+ E Q +   E+        + KRFF  S++T+                     +VSS  SEPVDIPGARS      T +           EEGWVSLWNTYTRLFPGTF GCSPP S PP DSPLYA+SP         P RRN +S
Sbjct:    5 VPGAREENRQGVGSRGYVRARALCFQPEEQKEREVEDQIICQQQHENKRFFGCSVKTAHCDGQQXXXXXXXXXXXXXXXSVSSTMSEPVDIPGARS------TSSSVESGGGAGADEEGWVSLWNTYTRLFPGTFTGCSPPGSAPPLDSPLYAASPXXXXXMNAYPSRRNKAS 171          
BLAST of mRNA_L-elsbetiae_contig1498.3570.1 vs. uniprot
Match: A0A6H5J7S5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7S5_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 1.880e-16
Identity = 88/266 (33.08%), Postives = 109/266 (40.98%), Query Frame = 0
Query:   86 SMALLGRSKPVHLRGSGREDEDAVFAA---EDAKRQRAISPSSPSLGSAAV-----------------CISPVGESIYTLSSPWM----ALPGPKDSN--ALASREKGGGRALCFEEEGQGQEAAEE------DQEKRFFSLRTSISNVSSAP------------------------SEPVDIPGARSVREDSGTRNPTGVPSANSLQEEGWVSLWNTYTRLFPGTFIGCSPPDSQPPPDSPLYASSP----------PKRRNASS 285
            S A     +P   R   ++  DA  AA   ED KR RA+SPS+ S G   V                      G   Y  SS  +    A P  ++ +   + SR     RA CF+ E + +   E+      +  KRFF    + ++                             SEPVDIPGAR+                    EEGWVSLWNTYTRLFPGTF GCSPP S PP DSPLYA+SP          P RRN +S
Sbjct:   27 SSAFCQERRPAEYRDGAQDPPDAAAAAPAEEDFKRPRAVSPSALSPGGPEVDDLVXXXXXXXXXXXXXXXXXAGPGGYLCSSTRLMMEKAAPAAREQDWQGVGSRGYVRARAPCFQPEERKERDVEDQITCRYENNKRFFGCGLTTAHCEEXXXXXXXXXXXXXXXXXXXXXXXXTMSEPVDIPGARTXX------XXXXXXXXXXXDEEGWVSLWNTYTRLFPGTFTGCSPPRSTPPLDSPLYAASPRAPPPPMDASPSRRNKAS 286          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1498.3570.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHR4_ECTSI1.300e-2042.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7S5_9PHAE1.880e-1633.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1498contigL-elsbetiae_contig1498:15136..18875 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1498.3570.1mRNA_L-elsbetiae_contig1498.3570.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1498 15136..18875 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1498.3570.1 ID=prot_L-elsbetiae_contig1498.3570.1|Name=mRNA_L-elsbetiae_contig1498.3570.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=534bp
PTRCAARAPCAVDYNSARSCALQIITKGSRSDQLGGRGGINILNRWARGF
YRLFSLVERQGFFRGSSKAGHTHITHFRLALPLCYSMALLGRSKPVHLRG
SGREDEDAVFAAEDAKRQRAISPSSPSLGSAAVCISPVGESIYTLSSPWM
ALPGPKDSNALASREKGGGRALCFEEEGQGQEAAEEDQEKRFFSLRTSIS
NVSSAPSEPVDIPGARSVREDSGTRNPTGVPSANSLQEEGWVSLWNTYTR
LFPGTFIGCSPPDSQPPPDSPLYASSPPKRRNASSASTPTPTTTTALRRR
VSLSPSLSSSSSSSFTGIGAVHGGGGAAPAAATAYASADHCFDGGAPPMH
SGGNSSSWTAMSTATTAAAETPRGGATSSARGRANTLPPSPLVLSHSPFD
GSRLSPPRPYGRTHRDRHSSQEEEEEEEEKPHKRHGGRSSRSGSGPRSRS
RSRPAAVAEESATRDGRPPPAGDEDQHGGEGGGGGGGGGRVLPPGSSWGQ
LSRLPLEEVGKALGTFSAKGFSAGVGDRRGGGRV
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