prot_L-elsbetiae_contig1498.3568.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1498.3568.1
Unique Nameprot_L-elsbetiae_contig1498.3568.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length796
Homology
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BLAST of mRNA_L-elsbetiae_contig1498.3568.1 vs. uniprot
Match: A0A6H5J6Q7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6Q7_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 5.560e-19
Identity = 97/234 (41.45%), Postives = 132/234 (56.41%), Query Frame = 0 
Query:    1 MKARVEREIAGAKSRKSLKRKLREETSRSAQLERRLTDSEEELQRLRQEFDTEKCASEERWRSTLEQAVTAARKAERAKASGKVEALTVKRMRSLSLEVAELKEKHESLQVENANLLATLRSRPPR-----------RPAATSSFERRAEKELCRLSAATAAEESESGRASSGSAGTSSGRHDGPGLADIVSGLADR-------IRSSFSERASDAR-SPRRFTGRRFYSDEED 215
            MKARVEREI G                      + L D+E++ +RLR++F +EK A E+ WRSTL+QAV +AR+AER+KAS KVE   V+++RSLS EVA LK K + LQ ENA     LR+R PR           R   + SF RRA+ E+ RLSA+ AA  +   R+S+ SA  S        L++ +SG+++R       +R S SE AS    SPR    RRF+S E++
Sbjct:   92 MKARVEREIEGXXXXXXXXXXXXXXXXXXXXXXQGLADAEDKQRRLRRKFASEKKALEQWWRSTLDQAVVSAREAERSKASAKVEGAMVRKLRSLSTEVATLKGKLKLLQEENATYAEALRARTPRPSSGPLKVDGDRLPRSESFGRRAKSEISRLSASAAATAAMDERSSADSAENSPRSKVSSTLSEFISGISERGLDLAVRLRKSISEHASGLGFSPRVSRRRRFFSGEDE 325
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BLAST of mRNA_L-elsbetiae_contig1498.3568.1 vs. uniprot
Match: D8LHR3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHR3_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 1.080e-16
Identity = 84/199 (42.21%), Postives = 117/199 (58.79%), Query Frame = 0 
Query:   36 LTDSEEELQRLRQEFDTEKCASEERWRSTLEQAVTAARKAERAKASGKVEALTVKRMRSLSLEVAELKEKHESLQVENANLLATLRSRPPR-----------RPAATSSFERRAEKELCRLSAATAAEESESGRASSGSAGTSSGRHDGPGLADIVSGLADR-------IRSSFSERASDAR-SPRRFTGRRFYSDEED 215
            L D+E++ +RLR++F +EK A E+ WRSTL+QAV +AR+ ER+KAS KVE   V+R+RSLS EVA LK K + LQ ENA     L +R P            R   + SF RRA+ E+ RLSA+ AA  +   R+++GS   S        L + +SG+++R       +R S SE AS    SPR    RRF+S E++
Sbjct:  127 LADAEDKQKRLRRKFASEKKALEQWWRSTLDQAVVSARETERSKASAKVEGAMVRRLRSLSTEVATLKGKLKLLQEENATYAEALHARTPPLSSGPLKDGRDRLPRSGSFGRRAKSEISRLSASAAAAAAMDERSTAGSEENSPRSKVSSTLTEFISGISERGLDLAVRLRKSISEHASGLGFSPRVSRRRRFFSGEDE 325
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1498.3568.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J6Q7_9PHAE5.560e-1941.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHR3_ECTSI1.080e-1642.21Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 92..119
NoneNo IPR availableCOILSCoilCoilcoord: 552..572
NoneNo IPR availableCOILSCoilCoilcoord: 15..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1498contigL-elsbetiae_contig1498:1091..7831 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1498.3568.1mRNA_L-elsbetiae_contig1498.3568.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1498 536..8347 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1498.3568.1 ID=prot_L-elsbetiae_contig1498.3568.1|Name=mRNA_L-elsbetiae_contig1498.3568.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=796bp
MKARVEREIAGAKSRKSLKRKLREETSRSAQLERRLTDSEEELQRLRQEF
DTEKCASEERWRSTLEQAVTAARKAERAKASGKVEALTVKRMRSLSLEVA
ELKEKHESLQVENANLLATLRSRPPRRPAATSSFERRAEKELCRLSAATA
AEESESGRASSGSAGTSSGRHDGPGLADIVSGLADRIRSSFSERASDARS
PRRFTGRRFYSDEEDHGGIDDGDYGSADYASAGLSPSLPLPEPMWQRRMQ
REQQQAWAAQRRERGSATATGEEKPRAKRDSYRSANGEVDVPRIGAAAAA
AAAAAEAAAAAGDSARPSLGREDTRRGSSSSSSSSSSRRRGLASLGSLYL
DAADAVGSSVHNPARGWVASEDGGDTVPAKPTPGVETLKGSSRRKHQRPL
GGGGGGETVAGSNAPSLHALLASGEFYPAGRDIAARRASTGNSSRYTGNK
GLTGLEGRRAAGKRSDRRDDQNMRELKDGPGGRDSAVAAAVTTTANDEGK
QVPSARLHRTLSSFRWSGGRGTVELRDHNNISSRFAESGEGWVTGDNPGA
VNESDNSRVEKDEDEQEEEEEEEGGRAWVEAAAREDVAGMTPTRVGREDD
AGGVAAGIARAEEAYLAQDNNDDDGLTTAKDVAARQGDAVGVFSQCVGQK
IGRSRSARAADTCGGGVHGTCRDSAPPRGTLLESAAARSEGSLLCSTFSA
GVGGGADASGKGRGDGKNGKLLDDLFPPTTGSSARVVGVVTGEDGGKQRP
ALDDLLREMAVAMPVEVPGEGDNAGGSDVAPLSHRRADFMGAVLA*
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