prot_L-elsbetiae_contig14885.3521.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14885.3521.1
Unique Nameprot_L-elsbetiae_contig14885.3521.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length183
Homology
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BLAST of mRNA_L-elsbetiae_contig14885.3521.1 vs. uniprot
Match: D7G5P0_ECTSI (SHSP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5P0_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 9.090e-41
Identity = 99/168 (58.93%), Postives = 115/168 (68.45%), Query Frame = 0 
Query:    3 SNTHLAALLALLLGTAAQSDAHRYRTHHNHN---GRRLFH-PSF---ETATAEAFRPFQ-APPRGSGLFTSAGPLVDVFQEVMSDVKRAARELSEPTPAAAGTPPHEVAETEDAAILTADLPGCKKEDVDAQISEDGGTKTLTIRAVRKK------SLLSRSNPPETS 156
            +NTHLA LLALLLGT  Q + HRYRTH  H    GRRLF  P+    E     AFRPF+   PRG    +SAGPL+DVFQ+VM ++K+ A ELS+PT   A +PP+EV ET DAA L  DLPGCKKEDVDAQ+SED GTKTLTI AVRKK         S S+PP+TS
Sbjct:    5 TNTHLA-LLALLLGTQ-QGECHRYRTHGGHXXXXGRRLFQLPTVVNNEIVDTGAFRPFRHVQPRGRPHVSSAGPLMDVFQDVMGEIKKVACELSDPT-TEARSPPYEVLETPDAATLIVDLPGCKKEDVDAQVSEDSGTKTLTITAVRKKPRQADGDARSPSSPPDTS 169
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14885.3521.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5P0_ECTSI9.090e-4158.93SHSP domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 64..164
e-value: 1.6E-11
score: 46.1
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 88..144
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..183
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.801

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14885contigL-elsbetiae_contig14885:2462..4348 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14885.3521.1mRNA_L-elsbetiae_contig14885.3521.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14885 2462..4348 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14885.3521.1 ID=prot_L-elsbetiae_contig14885.3521.1|Name=mRNA_L-elsbetiae_contig14885.3521.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=183bp
MTSNTHLAALLALLLGTAAQSDAHRYRTHHNHNGRRLFHPSFETATAEAF
RPFQAPPRGSGLFTSAGPLVDVFQEVMSDVKRAARELSEPTPAAAGTPPH
EVAETEDAAILTADLPGCKKEDVDAQISEDGGTKTLTIRAVRKKSLLSRS
NPPETSAAATAAGPAEPGKDTPPGSASSSSSSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone