prot_L-elsbetiae_contig14840.3499.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14840.3499.1
Unique Nameprot_L-elsbetiae_contig14840.3499.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length130
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig14840.3499.1 vs. uniprot
Match: D8LFE0_ECTSI (DNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFE0_ECTSI)

HSP 1 Score: 259 bits (661), Expect = 2.430e-78
Identity = 122/128 (95.31%), Postives = 125/128 (97.66%), Query Frame = 0 
Query:    3 QEDGDTGPIEEFLSEAVKGNCEGLMVKTLTTNSTYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILRSFWEDLKEHTVENRPR 130
            +EDGDTGPIEEFLSEAVKGNCEGLMVKTLT NS+YEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEIL SFWE+LKEHTVE RPR
Sbjct:  814 KEDGDTGPIEEFLSEAVKGNCEGLMVKTLTANSSYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILNSFWEELKEHTVEQRPR 941
[Close]
BLAST of mRNA_L-elsbetiae_contig14840.3499.1 vs. uniprot
Match: A0A836CMS0_9STRA (DNA ligase (ATP) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMS0_9STRA)

HSP 1 Score: 195 bits (495), Expect = 1.500e-56
Identity = 93/127 (73.23%), Postives = 107/127 (84.25%), Query Frame = 0 
Query:    3 QEDGDTGPIEEFLSEAVKGNCEGLMVKTLTTNSTYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILRSFWEDLKEHTVENRP 129
            QE+GDT PIE F++EAVKGNCEGLMVKTLT N+TYEPS+RSLNWLKLKKDYL  DG  V DSLDLVPIGA++G+GKR G +GAYLLACYEPD EEYQSVCKIGTGF++E L +    LK H +E +P
Sbjct:  421 QENGDTEPIEAFMAEAVKGNCEGLMVKTLTHNATYEPSRRSLNWLKLKKDYLD-DGSSVADSLDLVPIGAYYGRGKRAGAFGAYLLACYEPDAEEYQSVCKIGTGFSNERLLALDAMLKAHVIERKP 546
[Close]
BLAST of mRNA_L-elsbetiae_contig14840.3499.1 vs. uniprot
Match: A0A7S4N564_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N564_9STRA)

HSP 1 Score: 185 bits (469), Expect = 3.830e-56
Identity = 86/122 (70.49%), Postives = 102/122 (83.61%), Query Frame = 0 
Query:    4 EDGDTGPIEEFLSEAVKGNCEGLMVKTLTTNSTYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILRSFWEDLKEHTV 125
            EDGDT  +EEFL  AVKG CEGLMVKTL TN+ YEPS+RSLNWLKLKKDYL+    G+GDS+DLVP+GA++GKGKRTG YGAYLL CY+PD EE+QSVCKIGTGF+DE L++  +DL  H +
Sbjct:   73 EDGDTAILEEFLEAAVKGQCEGLMVKTLDTNAAYEPSRRSLNWLKLKKDYLE----GLGDSVDLVPLGAYWGKGKRTGVYGAYLLGCYDPDSEEFQSVCKIGTGFSDEALQTLSKDLNGHKI 190
[Close]
BLAST of mRNA_L-elsbetiae_contig14840.3499.1 vs. uniprot
Match: A0A7S2UW71_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UW71_9STRA)

HSP 1 Score: 182 bits (461), Expect = 1.050e-55
Identity = 85/116 (73.28%), Postives = 101/116 (87.07%), Query Frame = 0 
Query:    6 GDTGPIEEFLSEAVKGNCEGLMVKTLTTNSTYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILRSFWEDLK 121
            GDT PIE+FL EAV+GNCEGLMVKTLT N++YEPS+RSLNWLKLKKDYL  D  GV DSLD+VPIGA+ G+GKR+G YGAYLLACY+P+ EE+QS+CKIGTGF+DE+L S  E +K
Sbjct:    2 GDTAPIEQFLEEAVRGNCEGLMVKTLTQNASYEPSRRSLNWLKLKKDYL--DNMGVADSLDVVPIGAYHGRGKRSGVYGAYLLACYDPETEEFQSLCKIGTGFSDEMLASLTEAMK 115
[Close]
BLAST of mRNA_L-elsbetiae_contig14840.3499.1 vs. uniprot
Match: A0A7S2YG65_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YG65_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.530e-54
Identity = 84/122 (68.85%), Postives = 101/122 (82.79%), Query Frame = 0 
Query:    4 EDGDTGPIEEFLSEAVKGNCEGLMVKTLTTNSTYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILRSFWEDLKEHTV 125
            EDGDT  +EEFL +AVKG CEGLMVKTL  N+ YEPS+RSLNWLKLKKDYL+    G+GDS+DLVP+GA+ GKGKRTG YGAYLLACY+ + EE+QSVCKIGTGF+DE L++  E L +H +
Sbjct:   31 EDGDTAVLEEFLDQAVKGQCEGLMVKTLEVNAIYEPSRRSLNWLKLKKDYLE----GLGDSVDLVPLGAYHGKGKRTGFYGAYLLACYDAESEEFQSVCKIGTGFSDEDLKTLAETLNKHVI 148
[Close]
BLAST of mRNA_L-elsbetiae_contig14840.3499.1 vs. uniprot
Match: A0A7S3LA35_9STRA (DNA ligase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LA35_9STRA)

HSP 1 Score: 186 bits (472), Expect = 1.570e-54
Identity = 87/123 (70.73%), Postives = 103/123 (83.74%), Query Frame = 0 
Query:    3 QEDGDTGPIEEFLSEAVKGNCEGLMVKTLTTNSTYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILRSFWEDLKEHTV 125
            QEDGDT  IEEFL +AVKG CEGLMVKTL  N+ YEPSKRSLNWLKLKKDYL+    G+GDS+DLVP+GA+ G+GKRTG YGAYLLACY+PD EE+QSVCKIGTGF+DE L++  + L +H +
Sbjct:  253 QEDGDTTVIEEFLDQAVKGQCEGLMVKTLEENANYEPSKRSLNWLKLKKDYLE----GLGDSVDLVPLGAYHGRGKRTGVYGAYLLACYDPDTEEFQSVCKIGTGFSDEDLKNLADKLNQHVI 371
[Close]
BLAST of mRNA_L-elsbetiae_contig14840.3499.1 vs. uniprot
Match: A0A7S3Y279_HETAK (DNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y279_HETAK)

HSP 1 Score: 186 bits (471), Expect = 7.910e-53
Identity = 86/126 (68.25%), Postives = 103/126 (81.75%), Query Frame = 0 
Query:    4 EDGDTGPIEEFLSEAVKGNCEGLMVKTLTTNSTYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILRSFWEDLKEHTVENRP 129
            EDGDT P+E+FL E+VK  CEGLMVKTL  NS YEPS+RSLNWLKLKKDYL  D  GV DS+D+VPIGA+ GKGKRTG YGAYLLACY+P+ E++QS+CKIGTGF+DE LR+  E++KE  +   P
Sbjct:  471 EDGDTAPVEQFLEESVKAACEGLMVKTLVENSAYEPSRRSLNWLKLKKDYL--DNMGVADSVDVVPIGAYMGKGKRTGVYGAYLLACYDPETEDFQSLCKIGTGFSDEALRALTEEMKEFVIPKAP 594
[Close]
BLAST of mRNA_L-elsbetiae_contig14840.3499.1 vs. uniprot
Match: A0A7S2P3Z2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P3Z2_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.940e-52
Identity = 85/122 (69.67%), Postives = 98/122 (80.33%), Query Frame = 0 
Query:    4 EDGDTGPIEEFLSEAVKGNCEGLMVKTLTTNSTYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILRSFWEDLKEHTV 125
            E+GDT  IEEFL  AVKG CEGLMVKTL  N+ YEPS+RSLNWLKLKKDYL+    G+GDS+DLVPIGA+ GKGKRTG YGAYLLACY+ D EE+QSVCKIGTGF+DE L+     L + T+
Sbjct:  108 ENGDTALIEEFLENAVKGQCEGLMVKTLDVNAAYEPSRRSLNWLKLKKDYLE----GLGDSVDLVPIGAYHGKGKRTGVYGAYLLACYDEDSEEFQSVCKIGTGFSDENLKELAASLNKSTI 225
[Close]
BLAST of mRNA_L-elsbetiae_contig14840.3499.1 vs. uniprot
Match: A0A7S2NS91_9STRA (DNA ligase (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NS91_9STRA)

HSP 1 Score: 179 bits (454), Expect = 1.100e-50
Identity = 84/125 (67.20%), Postives = 100/125 (80.00%), Query Frame = 0 
Query:    4 EDGDTGPIEEFLSEAVKGNCEGLMVKTLTTNSTYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILRSFWEDLKEHTVENR 128
            EDGD   IE FL  AVKG CEGLM+KTL  N+ YEPS+RSLNWLKLKKDYL+    G+GDS+DLVP+GA+FGKGKRTG YGAYLLACY  D EEY+SVCKIGTGF+DE L++    L +H ++N+
Sbjct:  450 EDGDMSQIEGFLDAAVKGQCEGLMIKTLDDNADYEPSRRSLNWLKLKKDYLE----GLGDSVDLVPLGAYFGKGKRTGVYGAYLLACYNVDTEEYESVCKIGTGFSDEDLKTLAASLNKHKIDNK 570
[Close]
BLAST of mRNA_L-elsbetiae_contig14840.3499.1 vs. uniprot
Match: A0A7S1V6N1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V6N1_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.340e-50
Identity = 79/124 (63.71%), Postives = 100/124 (80.65%), Query Frame = 0 
Query:    7 DTGPIEEFLSEAVKGNCEGLMVKTLTT-NSTYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILRSFWEDLKEHTVENRP 129
            DT  +EEFL  AVK  CEGLM+KTL   ++ YEPSKRSLNWLKLKKDYL+    G+GDS+DLVP+GA+ G+GKRTG YGAYLLACY+ + EEYQSVCKIGTGF+DE L++  +  +EH ++++P
Sbjct:   45 DTAVLEEFLETAVKSQCEGLMIKTLNAKDANYEPSKRSLNWLKLKKDYLE----GLGDSVDLVPLGAYHGRGKRTGVYGAYLLACYDAELEEYQSVCKIGTGFSDEDLKTLHDGFEEHVIDSKP 164
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14840.3499.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFE0_ECTSI2.430e-7895.31DNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8L... [more]
A0A836CMS0_9STRA1.500e-5673.23DNA ligase (ATP) n=1 Tax=Tribonema minus TaxID=303... [more]
A0A7S4N564_9STRA3.830e-5670.49Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S2UW71_9STRA1.050e-5573.28Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2YG65_9STRA1.530e-5468.85Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S3LA35_9STRA1.570e-5470.73DNA ligase n=1 Tax=Amphora coffeiformis TaxID=2655... [more]
A0A7S3Y279_HETAK7.910e-5368.25DNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829... [more]
A0A7S2P3Z2_9STRA1.940e-5269.67Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2NS91_9STRA1.100e-5067.20DNA ligase (Fragment) n=1 Tax=Leptocylindrus danic... [more]
A0A7S1V6N1_9STRA1.340e-5063.71Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012310DNA ligase, ATP-dependent, centralPFAMPF01068DNA_ligase_A_Mcoord: 10..50
e-value: 1.6E-9
score: 37.7
IPR012310DNA ligase, ATP-dependent, centralPROSITEPS50160DNA_LIGASE_A3coord: 1..92
score: 28.739
IPR012309DNA ligase, ATP-dependent, C-terminalPFAMPF04679DNA_ligase_A_Ccoord: 79..129
e-value: 2.0E-9
score: 37.9
NoneNo IPR availableGENE3D2.40.50.140coord: 59..130
e-value: 1.8E-24
score: 88.5
NoneNo IPR availableGENE3D3.30.1490.70coord: 1..58
e-value: 4.1E-21
score: 77.3
NoneNo IPR availablePANTHERPTHR45674FAMILY NOT NAMEDcoord: 7..128
NoneNo IPR availablePANTHERPTHR45674:SF4DNA LIGASE 1coord: 7..128
NoneNo IPR availableSUPERFAMILY56091DNA ligase/mRNA capping enzyme, catalytic domaincoord: 11..55
IPR016059DNA ligase, ATP-dependent, conserved sitePROSITEPS00333DNA_LIGASE_A2coord: 24..50
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 62..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14840contigL-elsbetiae_contig14840:826..4348 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14840.3499.1mRNA_L-elsbetiae_contig14840.3499.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14840 826..4348 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14840.3499.1 ID=prot_L-elsbetiae_contig14840.3499.1|Name=mRNA_L-elsbetiae_contig14840.3499.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=130bp
NEQEDGDTGPIEEFLSEAVKGNCEGLMVKTLTTNSTYEPSKRSLNWLKLK
KDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQS
VCKIGTGFTDEILRSFWEDLKEHTVENRPR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012310DNA_ligase_ATP-dep_cent
IPR012309DNA_ligase_ATP-dep_C
IPR016059DNA_ligase_ATP-dep_CS
IPR012340NA-bd_OB-fold