mRNA_L-elsbetiae_contig14840.3499.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14840.3499.1 vs. uniprot
Match: D8LFE0_ECTSI (DNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFE0_ECTSI) HSP 1 Score: 259 bits (661), Expect = 2.430e-78 Identity = 122/128 (95.31%), Postives = 125/128 (97.66%), Query Frame = 1 Query: 7 QEDGDTGPIEEFLSEAVKGNCEGLMVKTLTTNSTYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILRSFWEDLKEHTVENRPR 390 +EDGDTGPIEEFLSEAVKGNCEGLMVKTLT NS+YEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEIL SFWE+LKEHTVE RPR Sbjct: 814 KEDGDTGPIEEFLSEAVKGNCEGLMVKTLTANSSYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILNSFWEELKEHTVEQRPR 941
BLAST of mRNA_L-elsbetiae_contig14840.3499.1 vs. uniprot
Match: A0A836CMS0_9STRA (DNA ligase (ATP) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMS0_9STRA) HSP 1 Score: 195 bits (495), Expect = 1.500e-56 Identity = 93/127 (73.23%), Postives = 107/127 (84.25%), Query Frame = 1 Query: 7 QEDGDTGPIEEFLSEAVKGNCEGLMVKTLTTNSTYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILRSFWEDLKEHTVENRP 387 QE+GDT PIE F++EAVKGNCEGLMVKTLT N+TYEPS+RSLNWLKLKKDYL DG V DSLDLVPIGA++G+GKR G +GAYLLACYEPD EEYQSVCKIGTGF++E L + LK H +E +P Sbjct: 421 QENGDTEPIEAFMAEAVKGNCEGLMVKTLTHNATYEPSRRSLNWLKLKKDYLD-DGSSVADSLDLVPIGAYYGRGKRAGAFGAYLLACYEPDAEEYQSVCKIGTGFSNERLLALDAMLKAHVIERKP 546
BLAST of mRNA_L-elsbetiae_contig14840.3499.1 vs. uniprot
Match: A0A7S4N564_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N564_9STRA) HSP 1 Score: 185 bits (469), Expect = 3.830e-56 Identity = 86/122 (70.49%), Postives = 102/122 (83.61%), Query Frame = 1 Query: 10 EDGDTGPIEEFLSEAVKGNCEGLMVKTLTTNSTYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILRSFWEDLKEHTV 375 EDGDT +EEFL AVKG CEGLMVKTL TN+ YEPS+RSLNWLKLKKDYL+ G+GDS+DLVP+GA++GKGKRTG YGAYLL CY+PD EE+QSVCKIGTGF+DE L++ +DL H + Sbjct: 73 EDGDTAILEEFLEAAVKGQCEGLMVKTLDTNAAYEPSRRSLNWLKLKKDYLE----GLGDSVDLVPLGAYWGKGKRTGVYGAYLLGCYDPDSEEFQSVCKIGTGFSDEALQTLSKDLNGHKI 190
BLAST of mRNA_L-elsbetiae_contig14840.3499.1 vs. uniprot
Match: A0A7S2UW71_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UW71_9STRA) HSP 1 Score: 182 bits (461), Expect = 1.050e-55 Identity = 85/116 (73.28%), Postives = 101/116 (87.07%), Query Frame = 1 Query: 16 GDTGPIEEFLSEAVKGNCEGLMVKTLTTNSTYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILRSFWEDLK 363 GDT PIE+FL EAV+GNCEGLMVKTLT N++YEPS+RSLNWLKLKKDYL D GV DSLD+VPIGA+ G+GKR+G YGAYLLACY+P+ EE+QS+CKIGTGF+DE+L S E +K Sbjct: 2 GDTAPIEQFLEEAVRGNCEGLMVKTLTQNASYEPSRRSLNWLKLKKDYL--DNMGVADSLDVVPIGAYHGRGKRSGVYGAYLLACYDPETEEFQSLCKIGTGFSDEMLASLTEAMK 115
BLAST of mRNA_L-elsbetiae_contig14840.3499.1 vs. uniprot
Match: A0A7S2YG65_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YG65_9STRA) HSP 1 Score: 180 bits (456), Expect = 1.530e-54 Identity = 84/122 (68.85%), Postives = 101/122 (82.79%), Query Frame = 1 Query: 10 EDGDTGPIEEFLSEAVKGNCEGLMVKTLTTNSTYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILRSFWEDLKEHTV 375 EDGDT +EEFL +AVKG CEGLMVKTL N+ YEPS+RSLNWLKLKKDYL+ G+GDS+DLVP+GA+ GKGKRTG YGAYLLACY+ + EE+QSVCKIGTGF+DE L++ E L +H + Sbjct: 31 EDGDTAVLEEFLDQAVKGQCEGLMVKTLEVNAIYEPSRRSLNWLKLKKDYLE----GLGDSVDLVPLGAYHGKGKRTGFYGAYLLACYDAESEEFQSVCKIGTGFSDEDLKTLAETLNKHVI 148
BLAST of mRNA_L-elsbetiae_contig14840.3499.1 vs. uniprot
Match: A0A7S3LA35_9STRA (DNA ligase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LA35_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.570e-54 Identity = 87/123 (70.73%), Postives = 103/123 (83.74%), Query Frame = 1 Query: 7 QEDGDTGPIEEFLSEAVKGNCEGLMVKTLTTNSTYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILRSFWEDLKEHTV 375 QEDGDT IEEFL +AVKG CEGLMVKTL N+ YEPSKRSLNWLKLKKDYL+ G+GDS+DLVP+GA+ G+GKRTG YGAYLLACY+PD EE+QSVCKIGTGF+DE L++ + L +H + Sbjct: 253 QEDGDTTVIEEFLDQAVKGQCEGLMVKTLEENANYEPSKRSLNWLKLKKDYLE----GLGDSVDLVPLGAYHGRGKRTGVYGAYLLACYDPDTEEFQSVCKIGTGFSDEDLKNLADKLNQHVI 371
BLAST of mRNA_L-elsbetiae_contig14840.3499.1 vs. uniprot
Match: A0A7S3Y279_HETAK (DNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y279_HETAK) HSP 1 Score: 186 bits (471), Expect = 7.910e-53 Identity = 86/126 (68.25%), Postives = 103/126 (81.75%), Query Frame = 1 Query: 10 EDGDTGPIEEFLSEAVKGNCEGLMVKTLTTNSTYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILRSFWEDLKEHTVENRP 387 EDGDT P+E+FL E+VK CEGLMVKTL NS YEPS+RSLNWLKLKKDYL D GV DS+D+VPIGA+ GKGKRTG YGAYLLACY+P+ E++QS+CKIGTGF+DE LR+ E++KE + P Sbjct: 471 EDGDTAPVEQFLEESVKAACEGLMVKTLVENSAYEPSRRSLNWLKLKKDYL--DNMGVADSVDVVPIGAYMGKGKRTGVYGAYLLACYDPETEDFQSLCKIGTGFSDEALRALTEEMKEFVIPKAP 594
BLAST of mRNA_L-elsbetiae_contig14840.3499.1 vs. uniprot
Match: A0A7S2P3Z2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P3Z2_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.940e-52 Identity = 85/122 (69.67%), Postives = 98/122 (80.33%), Query Frame = 1 Query: 10 EDGDTGPIEEFLSEAVKGNCEGLMVKTLTTNSTYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILRSFWEDLKEHTV 375 E+GDT IEEFL AVKG CEGLMVKTL N+ YEPS+RSLNWLKLKKDYL+ G+GDS+DLVPIGA+ GKGKRTG YGAYLLACY+ D EE+QSVCKIGTGF+DE L+ L + T+ Sbjct: 108 ENGDTALIEEFLENAVKGQCEGLMVKTLDVNAAYEPSRRSLNWLKLKKDYLE----GLGDSVDLVPIGAYHGKGKRTGVYGAYLLACYDEDSEEFQSVCKIGTGFSDENLKELAASLNKSTI 225
BLAST of mRNA_L-elsbetiae_contig14840.3499.1 vs. uniprot
Match: A0A7S2NS91_9STRA (DNA ligase (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NS91_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.100e-50 Identity = 84/125 (67.20%), Postives = 100/125 (80.00%), Query Frame = 1 Query: 10 EDGDTGPIEEFLSEAVKGNCEGLMVKTLTTNSTYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILRSFWEDLKEHTVENR 384 EDGD IE FL AVKG CEGLM+KTL N+ YEPS+RSLNWLKLKKDYL+ G+GDS+DLVP+GA+FGKGKRTG YGAYLLACY D EEY+SVCKIGTGF+DE L++ L +H ++N+ Sbjct: 450 EDGDMSQIEGFLDAAVKGQCEGLMIKTLDDNADYEPSRRSLNWLKLKKDYLE----GLGDSVDLVPLGAYFGKGKRTGVYGAYLLACYNVDTEEYESVCKIGTGFSDEDLKTLAASLNKHKIDNK 570
BLAST of mRNA_L-elsbetiae_contig14840.3499.1 vs. uniprot
Match: A0A7S1V6N1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V6N1_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.340e-50 Identity = 79/124 (63.71%), Postives = 100/124 (80.65%), Query Frame = 1 Query: 19 DTGPIEEFLSEAVKGNCEGLMVKTLTT-NSTYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILRSFWEDLKEHTVENRP 387 DT +EEFL AVK CEGLM+KTL ++ YEPSKRSLNWLKLKKDYL+ G+GDS+DLVP+GA+ G+GKRTG YGAYLLACY+ + EEYQSVCKIGTGF+DE L++ + +EH ++++P Sbjct: 45 DTAVLEEFLETAVKSQCEGLMIKTLNAKDANYEPSKRSLNWLKLKKDYLE----GLGDSVDLVPLGAYHGRGKRTGVYGAYLLACYDAELEEYQSVCKIGTGFSDEDLKTLHDGFEEHVIDSKP 164 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14840.3499.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14840.3499.1 >prot_L-elsbetiae_contig14840.3499.1 ID=prot_L-elsbetiae_contig14840.3499.1|Name=mRNA_L-elsbetiae_contig14840.3499.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=130bp NEQEDGDTGPIEEFLSEAVKGNCEGLMVKTLTTNSTYEPSKRSLNWLKLKback to top mRNA from alignment at L-elsbetiae_contig14840:826..4348- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14840.3499.1 ID=mRNA_L-elsbetiae_contig14840.3499.1|Name=mRNA_L-elsbetiae_contig14840.3499.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3523bp|location=Sequence derived from alignment at L-elsbetiae_contig14840:826..4348- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14840:826..4348- >mRNA_L-elsbetiae_contig14840.3499.1 ID=mRNA_L-elsbetiae_contig14840.3499.1|Name=mRNA_L-elsbetiae_contig14840.3499.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=780bp|location=Sequence derived from alignment at L-elsbetiae_contig14840:826..4348- (Laminarionema elsbetiae ELsaHSoW15)back to top |