prot_L-elsbetiae_contig14833.3494.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14833.3494.1
Unique Nameprot_L-elsbetiae_contig14833.3494.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length182
Homology
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BLAST of mRNA_L-elsbetiae_contig14833.3494.1 vs. uniprot
Match: D7FME7_ECTSI (Myb-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME7_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 6.760e-77
Identity = 140/162 (86.42%), Postives = 148/162 (91.36%), Query Frame = 0 
Query:    1 HAVQRVRDTEASHGERGAQQILPGEVAALRRQRLVKAAEPLTQRGLTRFQLSQMLEEKTKAFKDIRARLRLVLERKPRILPPVKPPRRRKTLWDFLLDEMRLIATDYHEERKLARHLLRGVAKRAQLARRELCEGRAEARDGRVADAGRAICRHISLLVSNP 162
            HAV+RVRD EAS GE G   ILPGEVAA+RR RLVKAAEP  QRGLTRFQLSQMLEEKTKAFKD+RARLRLVLERKPRILPPVKPPRRRKTLWDFLLDEMRLIATDY+EERKLARHLLRGVA R +LARRELCEGR +ARDGRVADAG AICRH+SLL S+P
Sbjct:  672 HAVRRVRDNEASRGE-GGLPILPGEVAAMRRHRLVKAAEPQNQRGLTRFQLSQMLEEKTKAFKDVRARLRLVLERKPRILPPVKPPRRRKTLWDFLLDEMRLIATDYNEERKLARHLLRGVANRTRLARRELCEGRPQARDGRVADAGVAICRHLSLLASSP 832
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BLAST of mRNA_L-elsbetiae_contig14833.3494.1 vs. uniprot
Match: A0A6H5JHX4_9PHAE (SNF2-rel_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHX4_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 3.630e-76
Identity = 139/163 (85.28%), Postives = 147/163 (90.18%), Query Frame = 0 
Query:    1 HAVQRVRDTEASHGERGAQQILPGEVAALRRQRLVKAAEPLTQRGLTRFQLSQMLEEKTKAFKDIRARLRLVLERKPRILPPVKPPRRRKTLWDFLLDEMRLIATDYHEERKLARHLLRGVAKRAQLARRELCEGRAEARDGRVADAGRAICRHISLLVSNPP 163
            HAV+RVRD EAS G  G   I PGEVAA+RRQRLVKAAEP  QRGLTRFQLSQMLEEKTKAFKD+RARLRLVLERKPRILPPVKPPRRRKTLWDFLLDEMRLIATDY+EERKLARHLLRGVA R +LARRE CEGR +ARDGRVADAG AICRH+SLL S+PP
Sbjct:  240 HAVRRVRDNEASRGG-GGLPIPPGEVAAMRRQRLVKAAEPQNQRGLTRFQLSQMLEEKTKAFKDVRARLRLVLERKPRILPPVKPPRRRKTLWDFLLDEMRLIATDYNEERKLARHLLRGVANRTRLARREFCEGRPQARDGRVADAGVAICRHLSLLGSSPP 401
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14833.3494.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FME7_ECTSI6.760e-7786.42Myb-like domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JHX4_9PHAE3.630e-7685.28SNF2-rel_dom domain-containing protein n=1 Tax=Ect... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014012Helicase/SANT-associated domainPFAMPF07529HSAcoord: 84..124
e-value: 1.9E-4
score: 21.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14833contigL-elsbetiae_contig14833:200..2935 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14833.3494.1mRNA_L-elsbetiae_contig14833.3494.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14833 200..2935 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14833.3494.1 ID=prot_L-elsbetiae_contig14833.3494.1|Name=mRNA_L-elsbetiae_contig14833.3494.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=182bp
HAVQRVRDTEASHGERGAQQILPGEVAALRRQRLVKAAEPLTQRGLTRFQ
LSQMLEEKTKAFKDIRARLRLVLERKPRILPPVKPPRRRKTLWDFLLDEM
RLIATDYHEERKLARHLLRGVAKRAQLARRELCEGRAEARDGRVADAGRA
ICRHISLLVSNPPRAATAIVAGAVAAKPTQNG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014012HSA_dom