prot_L-elsbetiae_contig14823.3490.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14823.3490.1
Unique Nameprot_L-elsbetiae_contig14823.3490.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length244
Homology
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BLAST of mRNA_L-elsbetiae_contig14823.3490.1 vs. uniprot
Match: D7FS08_ECTSI (PNPLA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS08_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 9.820e-19
Identity = 47/58 (81.03%), Postives = 52/58 (89.66%), Query Frame = 0 
Query:  187 MRKLLSDEGGGKTLFDLDARGDSQAMLEAREDEHPVLEALRSRLEAGTKPGSHGDGLK 244
            MR LL+D   GK+LFDLDARGDSQAMLEAREDEHPV+E LR R++AGTKPGSHGDGLK
Sbjct:    1 MRTLLAD---GKSLFDLDARGDSQAMLEAREDEHPVVEVLRKRVKAGTKPGSHGDGLK 55
[Close]
BLAST of mRNA_L-elsbetiae_contig14823.3490.1 vs. uniprot
Match: A0A6H5KCB2_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCB2_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 1.260e-18
Identity = 47/58 (81.03%), Postives = 52/58 (89.66%), Query Frame = 0 
Query:  187 MRKLLSDEGGGKTLFDLDARGDSQAMLEAREDEHPVLEALRSRLEAGTKPGSHGDGLK 244
            MR LL+D   GK+LFDLDARGDSQAMLEAREDEHPV+E LR R++AGTKPGSHGDGLK
Sbjct:    1 MRTLLAD---GKSLFDLDARGDSQAMLEAREDEHPVIEVLRKRVKAGTKPGSHGDGLK 55
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14823.3490.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FS08_ECTSI9.820e-1981.03PNPLA domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KCB2_9PHAE1.260e-1881.03PNPLA domain-containing protein n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 74..244
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..73
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14823contigL-elsbetiae_contig14823:2664..3395 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14823.3490.1mRNA_L-elsbetiae_contig14823.3490.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14823 2664..3397 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14823.3490.1 ID=prot_L-elsbetiae_contig14823.3490.1|Name=mRNA_L-elsbetiae_contig14823.3490.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=244bp
SNNKQQVLIDPFECVCVHAPNIPLYHPPSFSRILLWVPLMAKATCRARIR
GPRLQVMRGCYPTLCILLVLSLWESPSSTTVDAFVGLSPRTAPCIGGRCN
DAVPKHGLASGSRYPLRTHDRAAATAAAASSAEVAGTTAAEERGNSAAAA
AAATTAVAASAGGGGDTRKRKKKPRKERTRVTTAAEMRKLLSDEGGGKTL
FDLDARGDSQAMLEAREDEHPVLEALRSRLEAGTKPGSHGDGLK
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