prot_L-elsbetiae_contig1480.3479.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1480.3479.1
Unique Nameprot_L-elsbetiae_contig1480.3479.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length269
Homology
BLAST of mRNA_L-elsbetiae_contig1480.3479.1 vs. uniprot
Match: A0A6H5KX94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX94_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 1.160e-56
Identity = 147/311 (47.27%), Postives = 168/311 (54.02%), Query Frame = 0
Query:    5 GATDVCLTDGDEQSLKLAQENVDANLLQPLPCRQGPRTP---------APAGRDPQRQTLDASSTRHSDSDVVSEHVGTSHDAAGGGPGGRRKPSECSATISVRKLRWGREDDMRAACFPG-GDGDTGSSSDDSGGCCPWDVVLGSDIAALPYASAYGDLLRTIVSLVNSGKSDGGEGDKVSLPSPRE--AD---GAQE-------------EAINGDTRECEE----------------ETNRRG---DXXXXXXXXXAHKRRHVSEEAFFEDLKEKLGGEKSVREMGEDDIHADFRGTGIRLHMFEVDV 268
            GA +VCLTDGDE+SLKL Q NV  NL  P  CR+ P T          A    D +R   +A ST  S + V S             P  RR P   +AT+SV++LRWG  DDM A   P  GDGD+GS          WDVVLGSDIAALPYASAYGDLL+TIVSLVN   +DG   DK + PSP    AD   GA +             E ++G  RE                   E  R G   +         AHKRRH+SEEAFFEDLKE+LGGE+SVR   EDDIH DFRGTGIRLHMF VDV
Sbjct:   93 GAAEVCLTDGDEESLKLTQRNVTGNLS-PAVCRRSPSTASCCDQQQAQAVTAADKERTPCNADSTAGSTNIVES-------------PVDRRPPLATAATVSVQQLRWGCADDMHAVGVPRRGDGDSGSPR-------AWDVVLGSDIAALPYASAYGDLLQTIVSLVNI--TDGSGQDKHTAPSPPRTIADHVTGADQNTEISSTAAPDSCEPLDGSGRESGTGKPAITKTSAMKGVMAEAGRSGSEREGRRQVVVLLAHKRRHISEEAFFEDLKEELGGERSVRGTSEDDIHPDFRGTGIRLHMFVVDV 380          
BLAST of mRNA_L-elsbetiae_contig1480.3479.1 vs. uniprot
Match: D7FHI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI4_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 7.000e-56
Identity = 148/324 (45.68%), Postives = 170/324 (52.47%), Query Frame = 0
Query:    1 MPCPGATDVCLTDGDEQSLKLAQENVDANLLQPLPCRQGPRTPAPAGRDPQRQTLDASSTRHSDSDVVSEHVGTSHDAAGGGPGG------RRKP-------SECSATISVRKLRWGREDDMRAACFP-GGDGDTGSSSDDSGGCCPWDVVLGSDIAALPYASAYGDLLRTIVSLVNSGKSDG------------------GEGDKVSLPSPREADGAQEEAINGDT------------------------RECEEETNRRGDXXXXXXXXXAHKRRHVSEEAFFEDLKEKLGGEKSVREMGEDDIHADFRGTGIRLHMFEVDV 268
            M   GA +VCLTDGDE+SLKL Q NV  NL QP   R   R+P+ A    Q+Q  DA++          E  G + D+ GG          RR P       S  +ATISV+KLRWG  DDM AA  P GGDGD+GSS         WDVVLGSDIAALPYASAYGDLL+TIVSLVN+ K  G                  GE     + +   +D    EA++G                          R   E   RR           AHKRRHVSEEAFFEDL+E+LGGE+SVR   EDDIH DFRGTGIRLHMF VDV
Sbjct:   99 MTFKGAAEVCLTDGDEESLKLTQRNVTDNL-QPDFSR---RSPSTASCCDQQQAQDATAAEE-------ERTGCNADSKGGSTNSVESSADRRPPQATAATISATAATISVQKLRWGCADDMHAAGVPLGGDGDSGSSR-------AWDVVLGSDIAALPYASAYGDLLQTIVSLVNNTKGSGQVSHTAPSPPRTISDHVTGEDQNTEISNTAASDSC--EALDGSGCESGRGEPAIIKTSPMKGLMADAGRSRSERAGRR-----RVVVLLAHKRRHVSEEAFFEDLREELGGERSVRGTSEDDIHPDFRGTGIRLHMFVVDV 397          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1480.3479.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KX94_9PHAE1.160e-5647.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHI4_ECTSI7.000e-5645.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR14614HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGENcoord: 4..248

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1480contigL-elsbetiae_contig1480:6782..7588 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1480.3479.1mRNA_L-elsbetiae_contig1480.3479.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1480 5490..7588 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1480.3479.1 ID=prot_L-elsbetiae_contig1480.3479.1|Name=mRNA_L-elsbetiae_contig1480.3479.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=269bp
MPCPGATDVCLTDGDEQSLKLAQENVDANLLQPLPCRQGPRTPAPAGRDP
QRQTLDASSTRHSDSDVVSEHVGTSHDAAGGGPGGRRKPSECSATISVRK
LRWGREDDMRAACFPGGDGDTGSSSDDSGGCCPWDVVLGSDIAALPYASA
YGDLLRTIVSLVNSGKSDGGEGDKVSLPSPREADGAQEEAINGDTRECEE
ETNRRGDKRRRVVVLLAHKRRHVSEEAFFEDLKEKLGGEKSVREMGEDDI
HADFRGTGIRLHMFEVDV*
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