prot_L-elsbetiae_contig14794.3475.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14794.3475.1
Unique Nameprot_L-elsbetiae_contig14794.3475.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length139
Homology
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BLAST of mRNA_L-elsbetiae_contig14794.3475.1 vs. uniprot
Match: A0A6H5JIX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIX2_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 1.660e-14
Identity = 74/137 (54.01%), Postives = 91/137 (66.42%), Query Frame = 0 
Query:    3 ELREERRLREHDEEHYLAANKKERQQRREWEARCDEHVRDKREQAKRSREEAAAQVAAEREKWDRRMAAERRKGEALKKKLEKAEAVVKMQMESFKEVDEENDELREEVVQLRXXXXXXXXKLGMEIE-EEEEEEGS 138
            EL EER+LRE DE  Y AA ++ERQ RREWEAR DEH RDKREQAK+ R     Q+AAER++ +              +  +KAE VVKMQ+   KE+D+ENDELR       XXXXXXX KLG+E + E+EEEEG+
Sbjct: 1590 ELEEERKLREEDERRYEAALQQERQHRREWEARSDEHARDKREQAKQHRXXMRRQIAAERKRAEGXXXXXXXXXXXXAQ--QKAEEVVKMQLTMIKEMDQENDELR-------XXXXXXXEKLGIEDDGEDEEEEGT 1717
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BLAST of mRNA_L-elsbetiae_contig14794.3475.1 vs. uniprot
Match: D7FZK0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZK0_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 2.540e-6
Identity = 35/46 (76.09%), Postives = 38/46 (82.61%), Query Frame = 0 
Query:    3 ELREERRLREHDEEHYLAANKKERQQRREWEARCDEHVRDKREQAK 48
            EL EERRLRE DE+ + AA +KERQ RREWEAR DEH RDKREQAK
Sbjct: 1093 ELEEERRLREEDEKRHEAALQKERQHRREWEARSDEHARDKREQAK 1138
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14794.3475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JIX2_9PHAE1.660e-1454.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZK0_ECTSI2.540e-676.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 44..64
NoneNo IPR availableCOILSCoilCoilcoord: 69..131
NoneNo IPR availableCOILSCoilCoilcoord: 22..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14794contigL-elsbetiae_contig14794:1125..2877 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14794.3475.1mRNA_L-elsbetiae_contig14794.3475.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14794 1102..2940 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14794.3475.1 ID=prot_L-elsbetiae_contig14794.3475.1|Name=mRNA_L-elsbetiae_contig14794.3475.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=139bp
MEELREERRLREHDEEHYLAANKKERQQRREWEARCDEHVRDKREQAKRS
REEAAAQVAAEREKWDRRMAAERRKGEALKKKLEKAEAVVKMQMESFKEV
DEENDELREEVVQLREENDEFREKLGMEIEEEEEEEGS*
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