prot_L-elsbetiae_contig1476.3458.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1476.3458.1
Unique Nameprot_L-elsbetiae_contig1476.3458.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length391
Homology
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BLAST of mRNA_L-elsbetiae_contig1476.3458.1 vs. uniprot
Match: A0A6H5JRJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ2_9PHAE)

HSP 1 Score: 303 bits (776), Expect = 6.980e-96
Identity = 256/468 (54.70%), Postives = 286/468 (61.11%), Query Frame = 0 
Query:    1 MGCQASRQGSLGGENRPQELAKCAEVSADVRWAWLRSRTLFTFPEIRSLLQAFVKIASSSGEQ-------------LGAPK--APICSVEI-KGRGS--SLASSKTVLMDKAQFLSFCDSDDRFCVSEVVGAFASRLFDVLDSDGDGYLNFEAFTLGLSKLLKGPESEKLKLMYAAYDLSGVAPSEERXXXXXXXXXXXXXXXXXXXXXXXAGTSACKAKPSRRSKYLTLEDMTAVLASASQVAVYPTLLSFTTEG-GTITTTYLSGSGTXXXXXXXXXXXS--------------------------------------------------KSASDEPTRSLGGVIKPSLSLDSS------GTSXXXXXXXXXXXXXXXXXXXXXXTSARTSRGGPEALAQ---EIARRNAAEYAARAVSEFGQAHSGA-LTLKEFERWALSGPVLRCRINEFSIDLDLAPFQGVRL 389
            MGC AS+Q SL GE R +ELAKCA VS +VRW WLRSR LF+F E+RSL + F     +S +Q             LGA    AP+CSVE  KG G   S   +    M KAQFLS C+S D F +SEVVGAF SRLFDVLD++G G+L+FE   LGLSKLLKGPE E+LKL+Y+AYDLSGVAPSEE XXXXXXXXXXXXXXXXXXXXXXX      KAKPSRRSKYLTLED+TAVLASASQ A YP LLSFTT+G G +TT +LSG G     XXXX XX                                                               G+     SL  S            XXXXXXXXXXXX        SAR SR  PEALA+   E+A+RNA  YAA AVSEFGQA  GA LT KEFERWAL+GPVLRCRINEFSIDL+LAPF+GVRL
Sbjct:    1 MGCHASKQASLNGEIRSEELAKCAAVSGEVRWVWLRSRALFSFAELRSLFKQFQAALRASSQQQQQQSGELQYHDLLGAASQPAPVCSVEATKGGGGAPSCGGAPGSAMSKAQFLSLCESSDAFRLSEVVGAFGSRLFDVLDANGFGFLDFETLVLGLSKLLKGPERERLKLLYSAYDLSGVAPSEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAKPSRRSKYLTLEDITAVLASASQAAAYPALLSFTTDGKGGMTTGHLSGGGVIGGGXXXXTXXDGMFCCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNDRGWXXXXXXXXXXXXXXXXXXXXGLPSKEDSLRDSEEGKKEACGGRGXXXXXXXXXXXXGRSSRRGCSARVSRD-PEALAELLREMAQRNAERYAAAAVSEFGQAQGGAGLTQKEFERWALTGPVLRCRINEFSIDLNLAPFRGVRL 467
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BLAST of mRNA_L-elsbetiae_contig1476.3458.1 vs. uniprot
Match: D7FRP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRP0_ECTSI)

HSP 1 Score: 252 bits (643), Expect = 3.410e-77
Identity = 174/269 (64.68%), Postives = 198/269 (73.61%), Query Frame = 0 
Query:    1 MGCQASRQGSLGGENRPQELAKCAEVSADVRWAWLRSRTLFTFPEIRSLLQAFVKIASSSGEQ-------------LGAPK--APICSVE-IKG--RGSSLASSKTVLMDKAQFLSFCDSDDRFCVSEVVGAFASRLFDVLDSDGDGYLNFEAFTLGLSKLLKGPESEKLKLMYAAYDLSGVAPSEERXXXXXXXXXXXXXXXXXXXXXXXAGTSACKAKPSRRSKYLTLEDMTAVLASASQVAVYPTLLSFTTEG-GTITTTYLSGSG 250
            MGC AS+Q SL GE R +ELAKCA VS +VRW WLRSR+LF+F E+RSL + F     +S +Q             LGA    AP+CSVE IKG  R  S   +    M KAQFLS C+S D F +SEVVGAF SRLFDVLD+ G G+L+FE F LGLSKLLKGPE E+LKL+Y+AYDLSGVAPSEE XXXXXXXXXXXXXXXXXXXXXXX    + K KPSRRSKYLTLED+TAVLASASQ A YP LLSFTT+G G +TT +LSG G
Sbjct:    1 MGCHASKQASLSGEIRSEELAKCAAVSGEVRWVWLRSRSLFSFAELRSLFKQFQAALRASSQQQQEQPGELQYHDLLGAASQAAPVCSVEAIKGGGRAPSYGGAPGSAMSKAQFLSLCESSDAFRLSEVVGAFGSRLFDVLDASGVGFLDFETFVLGLSKLLKGPEKERLKLLYSAYDLSGVAPSEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGKVKPSRRSKYLTLEDITAVLASASQTAAYPALLSFTTDGKGGMTTGHLSGGG 269
[Close]
BLAST of mRNA_L-elsbetiae_contig1476.3458.1 vs. uniprot
Match: A0A6H5JF53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF53_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 1.530e-39
Identity = 165/304 (54.28%), Postives = 179/304 (58.88%), Query Frame = 0 
Query:  147 PESEKLKLMYAAYDLSGVAPSEERXXXXXXXXXXXXXXXXXXXXXXXAGTSACKAKPSRRSKYLTLEDMTAVLASASQVAVYPTLLSFTTEG-GTITTTYLSGSGTXXXXXXXXXXXS--------------------------------------------------KSASDEPTRSLGGVIKPSLSLDSS------GTSXXXXXXXXXXXXXXXXXXXXXXTSARTSRGGPEALAQ---EIARRNAAEYAARAVSEFGQAHSGA-LTLKEFERWALSGPVLRCRINEFSIDLDLAPFQGVRL 389
            P  E+LKL+Y+AYDLSGVAPSEE XXXXXXXXXXXXXXXXXXXXXXX      KAKPSRRSKYLTLED+TAVLASASQ A YP LLSFTT+G G +TT +LSG G     XXXX XX                                                               G+     SL  S            XXXXXXXXXXXX        SAR SR  PEALA+   E+A+RNA  YAA AVSEFGQA  GA LT KEFERWAL+GPVLRCRINEFSIDL+LAPF+GVRL
Sbjct:    4 PNLERLKLLYSAYDLSGVAPSEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAKPSRRSKYLTLEDITAVLASASQAAAYPALLSFTTDGKGGMTTGHLSGGGVIGGGXXXXTXXDGMFCCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNDRGWXXXXXXXXXXXXXXXXXXXXGLPSKEDSLRDSEEGKKEACGGRGXXXXXXXXXXXXGRSSRRGCSARVSRD-PEALAELLREMAQRNAERYAAAAVSEFGQAQGGAGLTQKEFERWALTGPVLRCRINEFSIDLNLAPFRGVRL 306
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1476.3458.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JRJ2_9PHAE6.980e-9654.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRP0_ECTSI3.410e-7764.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF53_9PHAE1.530e-3954.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028846Recoverin familyPANTHERPTHR23055CALCIUM BINDING PROTEINScoord: 37..360
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 111..146
score: 9.827
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 333..368
score: 5.447
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 93..369

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1476contigL-elsbetiae_contig1476:17331..21910 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1476.3458.1mRNA_L-elsbetiae_contig1476.3458.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1476 17331..22125 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1476.3458.1 ID=prot_L-elsbetiae_contig1476.3458.1|Name=mRNA_L-elsbetiae_contig1476.3458.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=391bp
MGCQASRQGSLGGENRPQELAKCAEVSADVRWAWLRSRTLFTFPEIRSLL
QAFVKIASSSGEQLGAPKAPICSVEIKGRGSSLASSKTVLMDKAQFLSFC
DSDDRFCVSEVVGAFASRLFDVLDSDGDGYLNFEAFTLGLSKLLKGPESE
KLKLMYAAYDLSGVAPSEERRKSSESSGNGSTLSSSGGVGAAAAGTSACK
AKPSRRSKYLTLEDMTAVLASASQVAVYPTLLSFTTEGGTITTTYLSGSG
TGGTGGGGGGGESKSASDEPTRSLGGVIKPSLSLDSSGTSSSSIGGAGGR
RRGHSGGGGGGGTSARTSRGGPEALAQEIARRNAAEYAARAVSEFGQAHS
GALTLKEFERWALSGPVLRCRINEFSIDLDLAPFQGVRLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028846Recoverin
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair