prot_L-elsbetiae_contig1475.3453.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1475.3453.1
Unique Nameprot_L-elsbetiae_contig1475.3453.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length347
Homology
BLAST of mRNA_L-elsbetiae_contig1475.3453.1 vs. uniprot
Match: A0A6H5L6M0_9PHAE (GDT1 family protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6M0_9PHAE)

HSP 1 Score: 435 bits (1119), Expect = 3.310e-150
Identity = 268/352 (76.14%), Postives = 286/352 (81.25%), Query Frame = 0
Query:    1 MKVSAIQLAFFGASVTAVRGFVSTFRTPTRAGPQRLH-----VPSRSLHARERSWASTASAPLGMETRARKLQRDVDEDQATKVGRHSFS-VRKLGGLQKVALLAVAGAATSQLLPHAAMAAAETAAPIVSAAADGTLVERLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPSVFTSGLPVDDIIAAAAFLYFGINTLKDAYQLPDDSNEGIDEERAEAEESVKELESKKTVWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVASGAIVAHASATGIAVTGGALLSQYISEKVIGYIGGTLFVVFSITTAIGIF 346
            MK SAI LA F A +  V GFVS        G +  H     V SR L    R  A  A++ L M+     L+   + ++     RH  S +   GGL KVALLA+AGA + QLLPHAA+AA ETA PI SAA DGTLVERLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPSVFTSGLP+DDIIAAAAFLYFGINTLKDAY LPDDSN+GI+EERAEAEESVKELE KKTVWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVASGAIVAHASATGIAVTGGALLSQYISEKVIGYIGG LFVVF++TTAIGIF
Sbjct:    1 MKASAIGLACF-AGIAHVSGFVSHV---IPRGSRVSHDVSSLVASRPLPRPYRPTAGRANSNLFMKKGGAHLREHGERNRT----RHLTSRIGHPGGLHKVALLALAGAVSCQLLPHAAVAATETAVPIASAAVDGTLVERLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPSVFTSGLPLDDIIAAAAFLYFGINTLKDAYALPDDSNQGIEEERAEAEESVKELEGKKTVWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVASGAIVAHASATGIAVTGGALLSQYISEKVIGYIGGALFVVFAVTTAIGIF 344          
BLAST of mRNA_L-elsbetiae_contig1475.3453.1 vs. uniprot
Match: D8LPN6_ECTSI (GDT1 family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPN6_ECTSI)

HSP 1 Score: 288 bits (738), Expect = 1.130e-93
Identity = 186/264 (70.45%), Postives = 200/264 (75.76%), Query Frame = 0
Query:    1 MKVSAIQLAFFGASVTAVRGFVS-TFRTPTRAGPQ--RLHVPSRSLHARERSWASTASAPLGMETRARKLQRDVDEDQATKVGRHSFSVR-KLGGLQKVALLAVAGAATSQLLPHAAMAAAETAAPIVSAAADGTLVERLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPSVFTSGLPVDDIIAAAAFLYFGINTLKDAYQLPDDSNEGIDEERAEAEESVKELESKKTVW 260
            MK SAI LA F A +  V GFV       +RA      L V SR L    R  A  A++ L M      L  D + ++     RH  S+    GGL KVALLA+AGA + QLLPHAA+AA ETA PI SAA DGTLVERLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPSVFTSGLP+DDIIAAAAFLYFGINTLKDAY LPDDSN+GI+EERAEAEESVKELE KKTVW
Sbjct:    1 MKASAIGLACF-AGIAHVSGFVPHVIPRGSRASHDVSSLVVASRPLPRPYRPTAGRANSSLFMNKGGAHLGEDGERNRT----RHLSSLMGHPGGLHKVALLALAGAVSCQLLPHAAVAATETAVPIASAAVDGTLVERLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPSVFTSGLPLDDIIAAAAFLYFGINTLKDAYALPDDSNQGIEEERAEAEESVKELEGKKTVW 259          
BLAST of mRNA_L-elsbetiae_contig1475.3453.1 vs. uniprot
Match: A0A836CPU7_9STRA (GDT1 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPU7_9STRA)

HSP 1 Score: 287 bits (734), Expect = 1.040e-91
Identity = 172/268 (64.18%), Postives = 196/268 (73.13%), Query Frame = 0
Query:   87 RKLGGLQKVALLAVAGAATSQLLPHAAMAAAETAAPIVSAAADGTLVERLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPSVFTSGLPVDDIIAAAAFLYFGINTLKDAYQLPDDSNEGIDEERAEAEESVKELE--------SKKTVWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVASGAIVAHASATGIAVTGGALLSQYISEKVIGYIGGTLFVVFSITTAIGIF 346
            R++G       L  A A  S  LP AA AA    AP+  A ADGTL E  TS+GF QAFSLVFVSEIGDKTFFIA LLAAKTSRLISFAGS+ AL+VMTVL+ L+G+AFHSVPS  T+G+P DD IA AAFLYFG+ TL+DA Q+PDD N G++ E A                     +  ALI QTF LVFAAEFGDRSFLTTIAL AAQNP  VA GAI AHASATGIAV GGALLSQYISEK++GYIGGTLF++F+ITTA+G+F
Sbjct:   89 RRVGAQLSGVFLVAAVALLSHALPAAAAAAVTAGAPLTGAIADGTLTEA-TSNGFVQAFSLVFVSEIGDKTFFIAGLLAAKTSRLISFAGSIAALSVMTVLSCLIGVAFHSVPSTLTNGIPFDDYIAVAAFLYFGLVTLRDASQIPDDDNSGMEAEAAXXXXXXXXXXXXXXXXXXGAPSTLALIAQTFGLVFAAEFGDRSFLTTIALSAAQNPISVAGGAIAAHASATGIAVMGGALLSQYISEKLVGYIGGTLFIIFAITTALGLF 355          
BLAST of mRNA_L-elsbetiae_contig1475.3453.1 vs. uniprot
Match: W7TMF8_9STRA (GDT1 family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMF8_9STRA)

HSP 1 Score: 270 bits (690), Expect = 9.580e-85
Identity = 180/374 (48.13%), Postives = 239/374 (63.90%), Query Frame = 0
Query:    4 SAIQLAFFGASVTAVRGFVST---------FRT-PTRAGPQRLHVPSRSLHARERS--------WASTASAPLGMETRARKLQRDVDEDQATKVGRHSFSVRKLGGL-----QKVALLAVAGAATSQLL----PHAAMAAAETAAPIVSAAA--DGTLVERLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPSVFTSGLPVDDIIAAAAFLYFGINTLKDAYQLPDDSNEGIDEERAEAEESVKELES--KKTVWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVASGAIVAHASATGIAVTGGALLSQYISEKVIGYIGGTLFVVFSITTAIGIF 346
            +A+ + F G S +A  GFV++         F    TR G ++     ++  + ER         W    SA +    +   L +  +E       +H    R LGG+     +KV  + +A A T  +L    P  A AA+ + A + + A+     +V +L +SGF QAFSLVFVSEIGDKTFFIA LLA KTSRLISF GS+ AL+VMT+++VL+G AFH++P     G   D  +A AAF YFG+ TLKD+Y + D  + G+DEERAEAE++V+E  +  ++T W  ILQ FSLVFAAEFGDRSFL+TIALGAAQNPF VA+GAI AHA+ATGIAV  GA LS+Y SEK+IGYIGGTLF++F++TTA+GIF
Sbjct:   14 AAVLVCFSGRSGSAPVGFVTSPVHHTAALSFNAIGTRPGLRQSAFILQASESHEREGQHAPLYFWKEQHSATIAASKQLHMLTKHSEE-------KHGAVERSLGGVIVKGFKKVGAVGLAVALTGIVLIAGMPIGAHAASASLADLTAGASLSYNNVVAKLAASGFLQAFSLVFVSEIGDKTFFIAGLLAMKTSRLISFTGSMAALSVMTIISVLIGQAFHAIPQGLGGGFKFDQWVAVAAFSYFGLKTLKDSYDMADGDSSGVDEERAEAEKAVQESSAPERRTPWGTILQIFSLVFAAEFGDRSFLSTIALGAAQNPFSVATGAIGAHATATGIAVASGAFLSKYFSEKLIGYIGGTLFIIFALTTALGIF 380          
BLAST of mRNA_L-elsbetiae_contig1475.3453.1 vs. uniprot
Match: A0A7S2U7L4_9STRA (GDT1 family protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7L4_9STRA)

HSP 1 Score: 260 bits (665), Expect = 4.200e-81
Identity = 145/218 (66.51%), Postives = 175/218 (80.28%), Query Frame = 0
Query:  131 TLVERLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPSVFTSGLPVDDIIAAAAFLYFGINTLKDAYQLPDDSNEGIDEERAEAEESVKELESKK--TVWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVASGAIVAHASATGIAVTGGALLSQYISEKVIGYIGGTLFVVFSITTAIGIF 346
            T ++ L+ +GF+QAFSLVFVSEIGDKTFFIA LLA KTSRLISF GS+GALAVMT+++VL+G  FH+VPS  + GLP+DDI A AAF +FGI TLK+A ++ ++    +DEE A+AEE+V+  +S K  T W  I   F LVFAAEFGDRSFL TIALGAAQNP  VA GAI AHA ATGIAV GGA L++Y+SEKVIGYIGGTLF+VF+ TTA+GIF
Sbjct:  154 TWLDSLSQTGFYQAFSLVFVSEIGDKTFFIAGLLAMKTSRLISFIGSIGALAVMTIISVLIGQIFHAVPSGLSQGLPLDDIAAVAAFAFFGIKTLKEAIEMDEEGVSAMDEEFADAEEAVEGSDSIKQITAWGKIASIFGLVFAAEFGDRSFLATIALGAAQNPVSVAGGAIAAHAMATGIAVAGGAYLAKYVSEKVIGYIGGTLFLVFAFTTALGIF 371          
BLAST of mRNA_L-elsbetiae_contig1475.3453.1 vs. uniprot
Match: A0A7S1FYG6_9STRA (GDT1 family protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FYG6_9STRA)

HSP 1 Score: 249 bits (636), Expect = 7.300e-77
Identity = 147/256 (57.42%), Postives = 187/256 (73.05%), Query Frame = 0
Query:   96 ALLAVAGAATSQLLPHAAMAAAETAA---PIVSAAADGTLVERLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPSVFTSGLPVDDIIAAAAFLYFGINTLKDAYQLPDDSNEGIDEERAEAEESVKELESKKTV--WALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVASGAIVAHASATGIAVTGGALLSQYISEKVIGYIGGTLFVVFSITTAIGIF 346
            ALL  AGAA +     + +A++   A     ++ A   + +E   S+GF+QAFSLVF+SEIGDKTFFIA LLA KTS+ +SF GS+GALAVMTV++ +LG  FH+VPS  T GLP+DD+ A  AF +FG  TLKD+Y L +D    +DEE A+AE++V+  E+ K V  W  I+ TF LVFAAEFGDRSFL+TIAL AAQNPF V  GAI  HA AT IAV+GG+ +++YISEKVIGYIGG LF+VF++TTA GIF
Sbjct:  108 ALLKTAGAAAAAFAASSILASSPAHAIDVATIAGAPAASFIESFASTGFYQAFSLVFLSEIGDKTFFIAGLLAMKTSKFVSFVGSLGALAVMTVISCILGQIFHAVPSGITQGLPLDDVAAVVAFAFFGFKTLKDSYDL-EDGESVMDEELADAEDAVEGSETIKQVTPWGQIISTFGLVFAAEFGDRSFLSTIALSAAQNPFSVCGGAIAGHALATAIAVSGGSYIAKYISEKVIGYIGGALFLVFALTTAYGIF 362          
BLAST of mRNA_L-elsbetiae_contig1475.3453.1 vs. uniprot
Match: A0A7S2K988_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K988_9STRA)

HSP 1 Score: 249 bits (637), Expect = 1.700e-76
Identity = 147/265 (55.47%), Postives = 195/265 (73.58%), Query Frame = 0
Query:   91 GLQKVALLAVAGAATSQLLPHAAMAAAETAAPIVSAAADG-------TLVERLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPSVFTSGLPVDDIIAAAAFLYFGINTLKDAYQLPDDSNEGIDEERAEAEESVKELESKK--TVWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVASGAIVAHASATGIAVTGGALLSQYISEKVIGYIGGTLFVVFSITTAIGIF 346
            G++KV+   ++  +T+ L+  AA+AA     P+ S A D         +V R + SGF+QAFSLVF+SEIGDKTFFIA LLA KTSRL+SF GS+GALA MTVL+VL+G  FH+VP+    G+P+DD+ A  AF +FG+ TLK+A  +  ++   +DEE  EA+E+V+  ++ K  T W  I+ TF+LVFAAEFGDRSFL+TIAL AAQNPF V  GA+ AH  ATGIAV GG+ +++YISEKVIGYIGG+LF+VF++TTA+GIF
Sbjct:  139 GVEKVSPGIISRRSTAVLVSAAAIAAVFFMTPLPSYALDSMSVADASAMVGRFSESGFYQAFSLVFLSEIGDKTFFIAGLLAMKTSRLVSFIGSMGALAAMTVLSVLIGQIFHAVPAGIAQGIPLDDVAAVLAFTFFGLKTLKEASDMDPEAGSVMDEEFEEAQEAVEGSQTIKEITAWGQIVSTFALVFAAEFGDRSFLSTIALSAAQNPFSVGFGAVAAHGIATGIAVAGGSYVAKYISEKVIGYIGGSLFLVFALTTALGIF 403          
BLAST of mRNA_L-elsbetiae_contig1475.3453.1 vs. uniprot
Match: A0A7S2HML6_9STRA (GDT1 family protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HML6_9STRA)

HSP 1 Score: 247 bits (630), Expect = 5.160e-76
Identity = 136/223 (60.99%), Postives = 177/223 (79.37%), Query Frame = 0
Query:  126 AAADGTLVERLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPSVFTSGLPVDDIIAAAAFLYFGINTLKDAYQLPDDSNEGIDEERAEAEESVKELES--KKTVWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVASGAIVAHASATGIAVTGGALLSQYISEKVIGYIGGTLFVVFSITTAIGIF 346
            AA+  + +E++  +GF+QAFSLVFVSEIGDKTFFIA LLA KTSR +S  GSVGALAVMT+++VL+G  FH+VPS    G+P+DD+ A  AF +FG  TLK+++ + ++    +DEE AEAEE+V+E ++  ++T WA I  TF LVFAAEFGDRSFL+TIAL AAQNP  VA GAI AHA AT IAV+GG+ +++YISEKVIG IGG+LF+VF++TTA+GIF
Sbjct:  137 AASASSFMEKVAETGFYQAFSLVFVSEIGDKTFFIAGLLAMKTSRFVSLVGSVGALAVMTIISVLIGQIFHAVPSGIAQGIPLDDVAAVLAFAFFGFKTLKESFDM-EEGESVMDEELAEAEETVEESDTIRQRTAWAQIASTFGLVFAAEFGDRSFLSTIALSAAQNPVSVAGGAIAAHAIATAIAVSGGSYIAKYISEKVIGIIGGSLFLVFAVTTALGIF 358          
BLAST of mRNA_L-elsbetiae_contig1475.3453.1 vs. uniprot
Match: A0A7S1CXU9_CYCTE (GDT1 family protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CXU9_CYCTE)

HSP 1 Score: 243 bits (621), Expect = 5.160e-75
Identity = 135/218 (61.93%), Postives = 173/218 (79.36%), Query Frame = 0
Query:  131 TLVERLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPSVFTSGLPVDDIIAAAAFLYFGINTLKDAYQLPDDSNEGIDEERAEAEESVKELESKK--TVWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVASGAIVAHASATGIAVTGGALLSQYISEKVIGYIGGTLFVVFSITTAIGIF 346
            +L + LT +GF+QAFSLVF+SEIGDKTFFIA LLA KTSR++S+ GS+GALAVMT+L+VL+G  FH+VP+    G+P+DD+ A  AF +FG+ TLK+A ++  D +  +DEE AEAEE+V+   + K  T WA I+ TF LVFAAEFGDRSFL+TIAL AAQNP  VA GA+ AH  ATGIAV+GG+ +++Y+SEKVIG IGGTLF+VF+ TTA GIF
Sbjct:  115 SLFDSLTETGFYQAFSLVFLSEIGDKTFFIAGLLAMKTSRVVSYLGSMGALAVMTILSVLIGQIFHAVPAGIAQGIPLDDVAAVLAFAFFGLKTLKEAIEMDSDGST-MDEEFAEAEETVEGSNTVKQSTAWAQIVSTFVLVFAAEFGDRSFLSTIALSAAQNPLSVAGGAVAAHGLATGIAVSGGSYVAKYVSEKVIGLIGGTLFLVFAATTAFGIF 331          
BLAST of mRNA_L-elsbetiae_contig1475.3453.1 vs. uniprot
Match: A0A8J6C509_DIALT (GDT1 family protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C509_DIALT)

HSP 1 Score: 237 bits (605), Expect = 1.160e-72
Identity = 131/224 (58.48%), Postives = 171/224 (76.34%), Query Frame = 0
Query:  126 AAADGTLVERLT----SSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPSVFTSGLPVDDIIAAAAFLYFGINTLKDAYQLPDDSNEGIDEERAEAEESVKELESKKTVWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVASGAIVAHASATGIAVTGGALLSQYISEKVIGYIGGTLFVVFSITTAIGI 345
            A+A  +LVE +T     S FFQA SL+FVS++GDKTFFIA +LAAKTSRL++F G+ GALAVMTV++V +G  FH+VP+ FT G+P+DDIIA A+F YFG+ +L DA  + D  + G+  E+ EAEE +  +  K+  WAL+ + F+L FAAE GDRS LTTIAL AAQNPFGV  GAI+AH  ATG AV GG+ LS+Y+SEK+IGYIGG+LF+VF+ TT +G+
Sbjct:   94 ASAGASLVEPVTRSLLDSPFFQALSLIFVSDLGDKTFFIATILAAKTSRLLTFVGAAGALAVMTVISVAIGQVFHAVPTGFTRGIPIDDIIAIASFSYFGLKSLADAAAIEDGDDSGMAAEQREAEEELAAIGDKRGRWALVGEAFALTFAAELGDRSQLTTIALSAAQNPFGVCGGAIIAHCLATGGAVLGGSFLSKYLSEKIIGYIGGSLFLVFAATTFVGL 317          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1475.3453.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6M0_9PHAE3.310e-15076.14GDT1 family protein n=1 Tax=Ectocarpus sp. CCAP 13... [more]
D8LPN6_ECTSI1.130e-9370.45GDT1 family protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A836CPU7_9STRA1.040e-9164.18GDT1 family protein n=1 Tax=Tribonema minus TaxID=... [more]
W7TMF8_9STRA9.580e-8548.13GDT1 family protein n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A7S2U7L4_9STRA4.200e-8166.51GDT1 family protein n=2 Tax=Attheya septentrionali... [more]
A0A7S1FYG6_9STRA7.300e-7757.42GDT1 family protein n=1 Tax=Corethron hystrix TaxI... [more]
A0A7S2K988_9STRA1.700e-7655.47Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2HML6_9STRA5.160e-7660.99GDT1 family protein n=1 Tax=Helicotheca tamesis Ta... [more]
A0A7S1CXU9_CYCTE5.160e-7561.93GDT1 family protein n=1 Tax=Cyclophora tenuis TaxI... [more]
A0A8J6C509_DIALT1.160e-7258.48GDT1 family protein n=1 Tax=Diacronema lutheri Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 236..256
NoneNo IPR availablePANTHERPTHR12608:SF6PROTEIN PAM71, CHLOROPLASTICcoord: 65..344
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 325..345
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 171..195
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 277..295
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 223..258
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 196..200
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 319..324
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 296..318
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 259..276
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 141..164
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 346..346
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..140
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 165..170
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 201..222
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableTMHMMTMhelixcoord: 173..195
NoneNo IPR availableTMHMMTMhelixcoord: 325..345
NoneNo IPR availableTMHMMTMhelixcoord: 200..222
NoneNo IPR availableTMHMMTMhelixcoord: 296..318
NoneNo IPR availableTMHMMTMhelixcoord: 144..166
NoneNo IPR availableTMHMMTMhelixcoord: 259..276
IPR001727Gdt1 familyPFAMPF01169UPF0016coord: 264..337
e-value: 1.4E-19
score: 70.2
coord: 143..221
e-value: 8.1E-18
score: 64.5
IPR001727Gdt1 familyPANTHERPTHR12608TRANSMEMBRANE PROTEIN HTP-1 RELATEDcoord: 65..344
IPR001727Gdt1 familyPROSITEPS01214UPF0016coord: 152..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1475contigL-elsbetiae_contig1475:12260..22259 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1475.3453.1mRNA_L-elsbetiae_contig1475.3453.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1475 12260..22360 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1475.3453.1 ID=prot_L-elsbetiae_contig1475.3453.1|Name=mRNA_L-elsbetiae_contig1475.3453.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=347bp
MKVSAIQLAFFGASVTAVRGFVSTFRTPTRAGPQRLHVPSRSLHARERSW
ASTASAPLGMETRARKLQRDVDEDQATKVGRHSFSVRKLGGLQKVALLAV
AGAATSQLLPHAAMAAAETAAPIVSAAADGTLVERLTSSGFFQAFSLVFV
SEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPS
VFTSGLPVDDIIAAAAFLYFGINTLKDAYQLPDDSNEGIDEERAEAEESV
KELESKKTVWALILQTFSLVFAAEFGDRSFLTTIALGAAQNPFGVASGAI
VAHASATGIAVTGGALLSQYISEKVIGYIGGTLFVVFSITTAIGIF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001727Gdt1