prot_L-elsbetiae_contig1474.3448.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1474.3448.1
Unique Nameprot_L-elsbetiae_contig1474.3448.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length145
Homology
BLAST of mRNA_L-elsbetiae_contig1474.3448.1 vs. uniprot
Match: D8LCK0_ECTSI (Rab11D, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK0_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 1.280e-81
Identity = 121/140 (86.43%), Postives = 129/140 (92.14%), Query Frame = 0
Query:    1 MSEEEPLKVILLGNSGVGKSNLIARFHNNDFCEDFESTVGVEFVTKRITVDGVPVKLQIWDTAGQERYASMMKTYYRKAKGSLLVYDGTSRSSFLGLEAWRKHLEANADPRCVSVVTANKSDMPTREVAPEEGMSYATQV 140
            MSEEEPLKVILLGNSGVGKSNLIARFHNNDF EDFESTVGVEFVTKRITVDGVPVKLQIWDTAGQERYASMMKTYYRKAKGSLL YD T+R SF+GLEAWRKHLEANADPRCVS+VT NKSD+  + V+P +G +YA QV
Sbjct:    1 MSEEEPLKVILLGNSGVGKSNLIARFHNNDFSEDFESTVGVEFVTKRITVDGVPVKLQIWDTAGQERYASMMKTYYRKAKGSLLFYDFTNRFSFVGLEAWRKHLEANADPRCVSIVTGNKSDVSDQLVSPNDGEAYARQV 140          
BLAST of mRNA_L-elsbetiae_contig1474.3448.1 vs. uniprot
Match: A0A6H5JPX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPX3_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 3.750e-81
Identity = 121/139 (87.05%), Postives = 130/139 (93.53%), Query Frame = 0
Query:    1 MSEEEPLKVILLGNSGVGKSNLIARFHNNDFCEDFESTVGVEFVTKRITVDGVPVKLQIWDTAGQERYASMMKTYYRKAKGSLLVYDGTSRSSFLGLEAWRKHLEANADPRCVSVVTANKSDMPTREVAPEEGMSYATQ 139
            MSEEEPLKVILLGNSGVGKSNLIARFHNNDF EDFESTVGVEFVTKRITVDGVPVKLQIWDTAGQERYASMMKTYYRKAKGSLLVYD T+RSSF+GLEAWRKHLEANADPRCVS+V  NKSD+  + V+P++G +YA Q
Sbjct:    1 MSEEEPLKVILLGNSGVGKSNLIARFHNNDFSEDFESTVGVEFVTKRITVDGVPVKLQIWDTAGQERYASMMKTYYRKAKGSLLVYDVTNRSSFVGLEAWRKHLEANADPRCVSIVAGNKSDVSDQLVSPKDGEAYARQ 139          
BLAST of mRNA_L-elsbetiae_contig1474.3448.1 vs. uniprot
Match: A0A835YTJ1_9STRA (GTPase Ypt3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTJ1_9STRA)

HSP 1 Score: 192 bits (489), Expect = 6.940e-60
Identity = 91/120 (75.83%), Postives = 107/120 (89.17%), Query Frame = 0
Query:    4 EEPLKVILLGNSGVGKSNLIARFHNNDFCEDFESTVGVEFVTKRITVDGVPVKLQIWDTAGQERYASMMKTYYRKAKGSLLVYDGTSRSSFLGLEAWRKHLEANADPRCVSVVTANKSDM 123
            ++P+KV+LLGNSGVGKSNLIAR+H N+F  +F ST+GVEFVTK+I VDGV ++LQIWDTAGQERYASMMKTYYRKAKG+LLVYD TS+SSF  LE WRK+LEANADP+CVS+V  NK DM
Sbjct:    3 DDPVKVVLLGNSGVGKSNLIARYHANEFSNEFMSTIGVEFVTKKIEVDGVAIRLQIWDTAGQERYASMMKTYYRKAKGALLVYDVTSQSSFDSLEIWRKNLEANADPQCVSMVAGNKCDM 122          
BLAST of mRNA_L-elsbetiae_contig1474.3448.1 vs. uniprot
Match: A0A836CB79_9STRA (Ras family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB79_9STRA)

HSP 1 Score: 168 bits (425), Expect = 8.680e-50
Identity = 84/133 (63.16%), Postives = 103/133 (77.44%), Query Frame = 0
Query:    5 EPLKVILLGNSGVGKSNLIARFHNNDFCEDFESTVGVEFVTKRITVDGVPVKLQIWDTAGQERYASMMKTYYRKAKGSLLVYDGTSRSSFLGLEAWRKHLEANADPRCVSVVTANKSDMPTREVAPEEGMSYA 137
            +P+KVILLG+SGVGKSNLIAR+H++ F  +F ST+GVEFVTK+I VDG  V LQIWDTAGQERYA+MMKTYYR+AKG++LVYD T  +SF  LE WR  L  NA P CV+VV  NK DM    V+ ++  +YA
Sbjct:   36 QPMKVILLGSSGVGKSNLIARYHSDSFSTEFMSTIGVEFVTKKIEVDGQAVWLQIWDTAGQERYAAMMKTYYRRAKGAVLVYDVTDATSFEALELWRAALGTNAAPDCVAVVAGNKCDMEPA-VSAQQAQAYA 167          
BLAST of mRNA_L-elsbetiae_contig1474.3448.1 vs. uniprot
Match: A0A6V2T6F4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2T6F4_HETAK)

HSP 1 Score: 147 bits (372), Expect = 4.340e-42
Identity = 72/141 (51.06%), Postives = 100/141 (70.92%), Query Frame = 0
Query:    2 SEEEPLKVILLGNSGVGKSNLIARFHNNDFCEDFESTVGVEFVTKRITVDGVPVKLQIWDTAGQERYASMMKTYYRKAKGSLLVYDGTSRSSFLGLEAWRKHLEANADPRCVSVVTANKSDM-----PTREVAPEEGMSYA 137
            S+E+  KV+LLGNSGVGKS +++R ++N+F EDF ST+GVEF+TK++ ++G  VK+QIWDTAGQERYA+MM TYYRKA+G++L Y+     SF  +E WR  L  NA+P    ++ A K D+     P R V P+   +YA
Sbjct:    6 SQEQQYKVVLLGNSGVGKSAVLSRLYSNEFSEDFLSTIGVEFLTKQLDINGEMVKVQIWDTAGQERYAAMMGTYYRKARGAVLCYEAVRPESFESVENWRTELMKNAEPDVKIILVATKMDLAGNVAPERLVDPQRARAYA 146          
BLAST of mRNA_L-elsbetiae_contig1474.3448.1 vs. uniprot
Match: A0A7S2RFG9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFG9_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.030e-39
Identity = 71/131 (54.20%), Postives = 96/131 (73.28%), Query Frame = 0
Query:    8 KVILLGNSGVGKSNLIARFHNNDFCEDFESTVGVEFVTKRITVDGVPVKLQIWDTAGQERYASMMKTYYRKAKGSLLVYDGTSRSSFLGLEAWRKHLEANADPRCVSVVTANKSDMP-TREVAPEEGMSYA 137
            KV+LLGN  VGKSNL+AR +++ F  D  +TVG+EFVTK +TVDG  VK QIWDTAGQER+++MM TYYRKAKG+LL++  T R SF+  EAWR+ +   A+P    ++  NK D+  +R+V+PEE  + A
Sbjct:   17 KVVLLGNPRVGKSNLLARLNDDSFSPDNSNTVGIEFVTKTMTVDGEAVKAQIWDTAGQERFSTMMGTYYRKAKGALLLFSVTDRESFVDAEAWRQQVTELAEPDIEVLLVGNKVDVQESRKVSPEEAQTMA 147          
BLAST of mRNA_L-elsbetiae_contig1474.3448.1 vs. uniprot
Match: A0A8K1FH75_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FH75_PYTOL)

HSP 1 Score: 142 bits (359), Expect = 6.820e-39
Identity = 71/133 (53.38%), Postives = 94/133 (70.68%), Query Frame = 0
Query:    8 KVILLGNSGVGKSNLIARFHNNDFCEDFESTVGVEFVTKRITVDGVPVKLQIWDTAGQERYASMMKTYYRKAKGSLLVYDGTSRSSFLGLEAWRKHLEANADPRCVSVVTANKSDMPT--REVAPEEGMSYAT 138
            K+I+LGNSGVGK+NL+ R +  DF E+F ST+GVEF+T  + +DGV VK QIWDTAGQER+ +MM TYYRKA G+LL++D   R+S +G+E W   L   A+P   +V+  NKSD+P   R V  EE   +AT
Sbjct:  116 KIIMLGNSGVGKTNLLNRLNKGDFNEEFTSTIGVEFLTHVVPIDGVDVKAQIWDTAGQERFHAMMATYYRKAIGALLIFDLGDRNSLMGVEKWLDQLLNVAEPGLHAVLVGNKSDLPIGQRAVTKEEAQQFAT 248          
BLAST of mRNA_L-elsbetiae_contig1474.3448.1 vs. uniprot
Match: A0A3P5YDW4_BRACM ((field mustard) hypothetical protein n=1 Tax=Brassica campestris TaxID=3711 RepID=A0A3P5YDW4_BRACM)

HSP 1 Score: 138 bits (347), Expect = 8.470e-39
Identity = 68/133 (51.13%), Postives = 94/133 (70.68%), Query Frame = 0
Query:    8 KVILLGNSGVGKSNLIARFHNNDFCEDFESTVGVEFVTKRITVDGVPVKLQIWDTAGQERYASMMKTYYRKAKGSLLVYDGTSRSSFLGLEAWRKHLEANADPRCVSVVTANKSDMPTREVAP-EEGMSYATQ 139
            KV+L+G+SGVGKSNL++RF  N+F  + +ST+GVEF T+ +TV+G  +K QIWDTAGQERY ++   YYR A G+LLVYD T R++F  ++ W K L+ + DP  V ++  NKSD+      P E+G SYA Q
Sbjct:   15 KVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLTVEGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENIDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQ 147          
BLAST of mRNA_L-elsbetiae_contig1474.3448.1 vs. uniprot
Match: A0A5D6Y601_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y601_9STRA)

HSP 1 Score: 141 bits (356), Expect = 2.230e-38
Identity = 67/132 (50.76%), Postives = 94/132 (71.21%), Query Frame = 0
Query:    8 KVILLGNSGVGKSNLIARFHNNDFCEDFESTVGVEFVTKRITVDGVPVKLQIWDTAGQERYASMMKTYYRKAKGSLLVYDGTSRSSFLGLEAWRKHLEANADPRCVSVVTANKSDM--PTREVAPEEGMSYA 137
            K++LLGNSGVGK+NL++R +  +F  +F ST+GVEF+T R+ +DG  VK QIWDTAGQER+ +MM TYYRKA G+LL++D   R S LG++ W   L + A+P   +V+  NK D+  P R V+P+E   +A
Sbjct:  129 KIVLLGNSGVGKTNLLSRLNKGEFSSEFTSTIGVEFLTHRMLLDGAEVKAQIWDTAGQERFHAMMSTYYRKAVGALLIFDVRDRQSLLGVDKWLDQLLSVAEPGLHAVLVGNKCDLLPPERAVSPDEAQHFA 260          
BLAST of mRNA_L-elsbetiae_contig1474.3448.1 vs. uniprot
Match: F0YCA9_AURAN (Uncharacterized protein (Fragment) n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YCA9_AURAN)

HSP 1 Score: 137 bits (344), Expect = 3.620e-38
Identity = 69/133 (51.88%), Postives = 91/133 (68.42%), Query Frame = 0
Query:    8 KVILLGNSGVGKSNLIARFHNNDFCEDFESTVGVEFVTKRITVDGVPVKLQIWDTAGQERYASMMKTYYRKAKGSLLVYDGTSRSSFLGLEAWRKHLEANADPRCVSVVTANKSDM-PTREVAPEEGMSYATQ 139
            KV+L+G+SGVGKSNL++RF  N+F  D +ST+GVEF TK I  +G  +K QIWDTAGQERY ++   YYR A G+LLVYD T  ++F  +E W K L  +A+   V ++  NKSD+ P R V  EE M+ A Q
Sbjct:   13 KVVLIGDSGVGKSNLLSRFTRNEFSLDSKSTIGVEFATKSIVAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKHATFENVERWLKELRDHAEANIVVMLVGNKSDLKPQRAVPTEEAMAMAEQ 145          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1474.3448.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCK0_ECTSI1.280e-8186.43Rab11D, RAB family GTPase n=1 Tax=Ectocarpus silic... [more]
A0A6H5JPX3_9PHAE3.750e-8187.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YTJ1_9STRA6.940e-6075.83GTPase Ypt3 n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A836CB79_9STRA8.680e-5063.16Ras family-domain-containing protein n=1 Tax=Tribo... [more]
A0A6V2T6F4_HETAK4.340e-4251.06Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2RFG9_9STRA1.030e-3954.20Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8K1FH75_PYTOL6.820e-3953.38Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3P5YDW4_BRACM8.470e-3951.13(field mustard) hypothetical protein n=1 Tax=Brass... [more]
A0A5D6Y601_9STRA2.230e-3850.76Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
F0YCA9_AURAN3.620e-3851.88Uncharacterized protein (Fragment) n=2 Tax=Pelagom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 110..123
score: 28.35
coord: 7..28
score: 43.56
coord: 30..46
score: 31.28
coord: 48..70
score: 54.1
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 7..143
e-value: 2.2E-45
score: 166.8
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 4..143
e-value: 1.0E-10
score: 35.7
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 9..144
e-value: 6.8E-4
score: -67.2
NoneNo IPR availableGENE3D3.40.50.300coord: 1..143
e-value: 2.3E-45
score: 156.1
NoneNo IPR availablePANTHERPTHR24073:SF873RAS-RELATED PROTEIN RABA2Bcoord: 7..140
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 7..140
NoneNo IPR availablePROSITEPS51419RABcoord: 2..144
score: 23.922
IPR001806Small GTPasePFAMPF00071Rascoord: 8..140
e-value: 9.0E-42
score: 142.4
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 6..131
e-value: 6.9E-26
score: 88.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1474contigL-elsbetiae_contig1474:16156..23801 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1474.3448.1mRNA_L-elsbetiae_contig1474.3448.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1474 15923..23801 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1474.3448.1 ID=prot_L-elsbetiae_contig1474.3448.1|Name=mRNA_L-elsbetiae_contig1474.3448.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=145bp
MSEEEPLKVILLGNSGVGKSNLIARFHNNDFCEDFESTVGVEFVTKRITV
DGVPVKLQIWDTAGQERYASMMKTYYRKAKGSLLVYDGTSRSSFLGLEAW
RKHLEANADPRCVSVVTANKSDMPTREVAPEEGMSYATQVRQQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase