prot_L-elsbetiae_contig1473.3440.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1473.3440.1
Unique Nameprot_L-elsbetiae_contig1473.3440.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length229
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1473.3440.1 vs. uniprot
Match: A0A0C7MLW4_9SACH (LALA0S02e00518g1_1 n=4 Tax=Lachancea TaxID=300275 RepID=A0A0C7MLW4_9SACH)

HSP 1 Score: 57.4 bits (137), Expect = 9.100e-7
Identity = 39/101 (38.61%), Postives = 54/101 (53.47%), Query Frame = 0 
Query:  126 SAESRLAQEKTWLADALPQYCHAEPIRGSD-FVWSFRVAGMHRTLYQEIGKVSFRAHFPRDYPRTPPTLLLTEELIHPNWQFPARGLQVPHLTKEGWDPSM 225
            +A+ RL +E T L    PQ   A PI   + FVW   ++G   + Y E G  + R  FPRDYP +PP LL T  ++HPN  +P   + +  L   G DP+M
Sbjct:    4 TAQKRLFKELTQLIKDSPQGIVAGPITEDNLFVWDCLISGPPDSPY-EGGVFNARLEFPRDYPLSPPKLLFTPSILHPNI-YPNGEVCISILHSPGDDPNM 102
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1473.3440.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0C7MLW4_9SACH9.100e-738.61LALA0S02e00518g1_1 n=4 Tax=Lachancea TaxID=300275 ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 123..229
e-value: 1.5E-12
score: 49.4
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 127..228
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 130..228
e-value: 2.4E-10
score: 40.2
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 129..229
score: 14.054

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1473contigL-elsbetiae_contig1473:14490..18513 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1473.3440.1mRNA_L-elsbetiae_contig1473.3440.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1473 14490..18513 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1473.3440.1 ID=prot_L-elsbetiae_contig1473.3440.1|Name=mRNA_L-elsbetiae_contig1473.3440.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=229bp
IPGANPPAAVERERGERGTRERGTRERGTREKGDRGEVIRSSVSSLPPHS
GAVMAQPRGSGAVERNNSSRTEHDVAASGRGEPRRAYSGRGVDAPSAAEG
SRRSAPGGGAVAAALATPALSPRFLSAESRLAQEKTWLADALPQYCHAEP
IRGSDFVWSFRVAGMHRTLYQEIGKVSFRAHFPRDYPRTPPTLLLTEELI
HPNWQFPARGLQVPHLTKEGWDPSMTISK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2