prot_L-elsbetiae_contig1473.3438.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1473.3438.1
Unique Nameprot_L-elsbetiae_contig1473.3438.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length96
Homology
BLAST of mRNA_L-elsbetiae_contig1473.3438.1 vs. uniprot
Match: A0A097IUM0_9PHAE (Malate dehydrogenase n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A097IUM0_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 9.470e-45
Identity = 84/90 (93.33%), Postives = 85/90 (94.44%), Query Frame = 0
Query:    6 QVPDAGAVEFCVDGRWTPVSSVIRDTAWLNLGGSGSGHERLDADGQVVLGLTEAVRGRGAAVLGARKLSSAMSAANAIASHLADWLVGPV 95
            QVPDA AVEF VDGRWTPVSSVIRDTAWLNL  SGSGHERLDADG+VVLGLTEAVRGRGAAVLGARKLSSAMSAANAIASHLADWLV PV
Sbjct:  215 QVPDASAVEFRVDGRWTPVSSVIRDTAWLNL--SGSGHERLDADGEVVLGLTEAVRGRGAAVLGARKLSSAMSAANAIASHLADWLVAPV 302          
BLAST of mRNA_L-elsbetiae_contig1473.3438.1 vs. uniprot
Match: A0A097IUL1_9PHAE (Malate dehydrogenase n=1 Tax=Scytosiphon dotyi TaxID=180438 RepID=A0A097IUL1_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 3.000e-36
Identity = 72/91 (79.12%), Postives = 76/91 (83.52%), Query Frame = 0
Query:    6 QVPDAGAVEFCVDGRWTPVSSVIRDTAWLNLGGSGSGHERLDADGQVVLGLTEAVRGRGAAVLGARKLSSAMSAANAIASHLADWLVGPVA 96
            QVPDA AVEF VDGRWTP +SVIRD AWL L  S + HER DADG+ VLGL EAVRGRGAAVLGARKLSSAMSAANAIA HL+DWLV P A
Sbjct:  224 QVPDASAVEFFVDGRWTPAASVIRDAAWLTL--SSNAHERFDADGEAVLGLAEAVRGRGAAVLGARKLSSAMSAANAIAGHLSDWLVRPSA 312          
BLAST of mRNA_L-elsbetiae_contig1473.3438.1 vs. uniprot
Match: A0A097IUP1_9PHAE (Malate dehydrogenase n=1 Tax=Colpomenia sinuosa TaxID=87236 RepID=A0A097IUP1_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 4.530e-35
Identity = 71/91 (78.02%), Postives = 74/91 (81.32%), Query Frame = 0
Query:    6 QVPDAGAVEFCVDGRWTPVSSVIRDTAWLNLGGSGSGHERLDADGQVVLGLTEAVRGRGAAVLGARKLSSAMSAANAIASHLADWLVGPVA 96
            QVPDA AVEF VDGRWTP +SVIRD AWL L  S + HE  DADG+ VLGL E VRGRGAAVLGARKLSSAMSAANAIASHL DWLV P A
Sbjct:  222 QVPDASAVEFLVDGRWTPAASVIRDAAWLTL--SSNSHESFDADGEPVLGLAEGVRGRGAAVLGARKLSSAMSAANAIASHLKDWLVQPEA 310          
BLAST of mRNA_L-elsbetiae_contig1473.3438.1 vs. uniprot
Match: A0A6H5KVV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV0_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 7.720e-35
Identity = 71/90 (78.89%), Postives = 76/90 (84.44%), Query Frame = 0
Query:    6 QVPDAGAVEFCVDGRWTPVSSVIRDTAWLNLGGSGSGHERLDADGQVVLGLTEAVRGRGAAVLGARKLSSAMSAANAIASHLADWLVGPV 95
            QVPDA AVEF V+G WTP  +VIRD +WLNL  S S HER DA+G VVLGL EAVRGRGAAVLGARKLSSAMSAANAIASHLADWLV P+
Sbjct:  216 QVPDASAVEFRVNGCWTPAPAVIRDASWLNL--SNSSHERFDAEGGVVLGLAEAVRGRGAAVLGARKLSSAMSAANAIASHLADWLVPPL 303          
BLAST of mRNA_L-elsbetiae_contig1473.3438.1 vs. uniprot
Match: A0A097IUJ7_SCYLO (Malate dehydrogenase n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A097IUJ7_SCYLO)

HSP 1 Score: 125 bits (314), Expect = 3.210e-32
Identity = 67/89 (75.28%), Postives = 71/89 (79.78%), Query Frame = 0
Query:    6 QVPDAGAVEFCVDGRWTPVSSVIRDTAWLNLGGSGSGHERLDADGQVVLGLTEAVRGRGAAVLGARKLSSAMSAANAIASHLADWLVGP 94
            QVPDA AVEF VD RW P +SVIRD AWL L  S + H R DADG+ VLGL EAVRGRGAAVL ARKLSSAMSAANAIA HL+DWLV P
Sbjct:  222 QVPDASAVEFFVDDRWIPAASVIRDAAWLTL--SSNSHGRFDADGEAVLGLAEAVRGRGAAVLDARKLSSAMSAANAIAGHLSDWLVRP 308          
BLAST of mRNA_L-elsbetiae_contig1473.3438.1 vs. uniprot
Match: A0A097IUN1_9PHAE (Malate dehydrogenase n=5 Tax=Sargassum TaxID=3015 RepID=A0A097IUN1_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 4.210e-24
Identity = 60/88 (68.18%), Postives = 63/88 (71.59%), Query Frame = 0
Query:    6 QVPDAGAVEFCVDGRWTPVSSVIRDTAWLNLGGS--GSGHERLDADGQVVLGLTEAVRGRGAAVLGARKLSSAMSAANAIASHLADWL 91
            QVPD  AVEF VDGRW P+ SVI DT WL L  S  G G     A+GQ    L EAVR RGAAVLGARKLSSAMSAANAIA HL+DWL
Sbjct:  208 QVPDVSAVEFFVDGRWVPIESVIPDTTWLGLANSLPGGGSIGGGAEGQ---SLVEAVRKRGAAVLGARKLSSAMSAANAIAEHLSDWL 292          
BLAST of mRNA_L-elsbetiae_contig1473.3438.1 vs. uniprot
Match: A0A097IUP6_SACJA (Malate dehydrogenase n=2 Tax=Saccharina TaxID=309357 RepID=A0A097IUP6_SACJA)

HSP 1 Score: 101 bits (251), Expect = 2.620e-23
Identity = 58/86 (67.44%), Postives = 65/86 (75.58%), Query Frame = 0
Query:    6 QVPDAGAVEFCVDGRWTPVSSVIRDTAWLNLGGSGSGHERLDADGQVVLGLTEAVRGRGAAVLGARKLSSAMSAANAIASHLADWL 91
            QVPDA AVEF +DG W P  SVI D+ WL+L  S     R+  +G+V  GL EAVRGRGAAVLGARKLSSAMSAANAIA HL+DWL
Sbjct:  212 QVPDASAVEFLIDGSWVPAVSVIGDSGWLDLSTSTPQGGRV-LEGEVS-GLAEAVRGRGAAVLGARKLSSAMSAANAIAGHLSDWL 295          
BLAST of mRNA_L-elsbetiae_contig1473.3438.1 vs. uniprot
Match: A0A097IUK3_9PHAE (Malate dehydrogenase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A097IUK3_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 1.770e-18
Identity = 48/95 (50.53%), Postives = 59/95 (62.11%), Query Frame = 0
Query:    6 QVPDAGAVEFCVDGRWTPVSSVIRDTAWLNL------GGSGSGHERLDADGQVVLGLTEAVRGRGAAVLGARKLSSAMSAANAIASHLADWLVGP 94
            QVPDA +VEFC++G W P  +++ D+ WL L       G+G G             L+EAVR RGA +L ARKLSSAMSAANA A+HL DWL  P
Sbjct:  207 QVPDASSVEFCLNGNWVPAQTILGDSPWLKLQDANAVAGAGGGDY-----------LSEAVRNRGAVILAARKLSSAMSAANATAAHLGDWLCSP 290          
BLAST of mRNA_L-elsbetiae_contig1473.3438.1 vs. uniprot
Match: A0A097IUM7_UNDPI (Malate dehydrogenase n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=A0A097IUM7_UNDPI)

HSP 1 Score: 76.6 bits (187), Expect = 2.470e-14
Identity = 47/87 (54.02%), Postives = 53/87 (60.92%), Query Frame = 0
Query:    6 QVPDAGAVEFCVDGRWTPVSSVIRDTAWLNLGGSGSGHERLDADGQVVLGLTEAVRGRGAAVLGARKLSSAMSAANAIASHLADWLV 92
            QVPD  + E  +   W P     RD   L L     G      +G+V   LT+AVRGRGAAVL ARKLSSAMSAANAIA HL+DWLV
Sbjct:  217 QVPDVSSAELFIGNMWVPAVFAFRDAHLLGLNAPRPGSAPT-GEGEVC-SLTKAVRGRGAAVLEARKLSSAMSAANAIAGHLSDWLV 301          
BLAST of mRNA_L-elsbetiae_contig1473.3438.1 vs. uniprot
Match: D7FQW1_ECTSI (Malate dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW1_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 1.430e-11
Identity = 34/50 (68.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    6 QVPDAGAVEFCVDGRWTPVSSVIRDTAWLNLGGSGSGHERLDADGQVVLG 55
            QVPDA AVEF V+G WTP  +VIRD +WLNL  S S HER DA+G VVLG
Sbjct:  216 QVPDASAVEFRVNGCWTPAPAVIRDASWLNL--SNSSHERFDAEGGVVLG 263          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1473.3438.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A097IUM0_9PHAE9.470e-4593.33Malate dehydrogenase n=1 Tax=Punctaria latifolia T... [more]
A0A097IUL1_9PHAE3.000e-3679.12Malate dehydrogenase n=1 Tax=Scytosiphon dotyi Tax... [more]
A0A097IUP1_9PHAE4.530e-3578.02Malate dehydrogenase n=1 Tax=Colpomenia sinuosa Ta... [more]
A0A6H5KVV0_9PHAE7.720e-3578.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A097IUJ7_SCYLO3.210e-3275.28Malate dehydrogenase n=1 Tax=Scytosiphon lomentari... [more]
A0A097IUN1_9PHAE4.210e-2468.18Malate dehydrogenase n=5 Tax=Sargassum TaxID=3015 ... [more]
A0A097IUP6_SACJA2.620e-2367.44Malate dehydrogenase n=2 Tax=Saccharina TaxID=3093... [more]
A0A097IUK3_9PHAE1.770e-1850.53Malate dehydrogenase n=1 Tax=Dictyopteris undulata... [more]
A0A097IUM7_UNDPI2.470e-1454.02Malate dehydrogenase n=1 Tax=Undaria pinnatifida T... [more]
D7FQW1_ECTSI1.430e-1168.00Malate dehydrogenase n=1 Tax=Ectocarpus siliculosu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015955Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminalGENE3D3.90.110.10coord: 4..94
e-value: 3.5E-13
score: 51.5
IPR015955Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminalSUPERFAMILY56327LDH C-terminal domain-likecoord: 55..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1473contigL-elsbetiae_contig1473:4551..6678 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1473.3438.1mRNA_L-elsbetiae_contig1473.3438.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1473 4551..6678 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1473.3438.1 ID=prot_L-elsbetiae_contig1473.3438.1|Name=mRNA_L-elsbetiae_contig1473.3438.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=96bp
MYLVGQVPDAGAVEFCVDGRWTPVSSVIRDTAWLNLGGSGSGHERLDADG
QVVLGLTEAVRGRGAAVLGARKLSSAMSAANAIASHLADWLVGPVA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015955Lactate_DH/Glyco_Ohase_4_C