prot_L-elsbetiae_contig14727.3436.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14727.3436.1
Unique Nameprot_L-elsbetiae_contig14727.3436.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length85
Homology
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BLAST of mRNA_L-elsbetiae_contig14727.3436.1 vs. uniprot
Match: W7U083_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U083_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 8.000e-14
Identity = 32/55 (58.18%), Postives = 37/55 (67.27%), Query Frame = 0 
Query:    2 VLKPQTLRNWKLLTGVASAATVFHTVFRVDYGPHDHCFTGIQRWYNDRMDSLLGI 56
            VLKP TLR WK+ TGV    T F  VF  DYG  +H FT IQRWY  ++DSLLG+
Sbjct:    7 VLKPSTLRAWKVATGVICLVTGFQLVFLTDYGDKEHVFTPIQRWYMGQLDSLLGV 61
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14727.3436.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
W7U083_9STRA8.000e-1458.18Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..84
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14727contigL-elsbetiae_contig14727:2975..3570 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14727.3436.1mRNA_L-elsbetiae_contig14727.3436.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14727 2907..4218 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14727.3436.1 ID=prot_L-elsbetiae_contig14727.3436.1|Name=mRNA_L-elsbetiae_contig14727.3436.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=85bp
MVLKPQTLRNWKLLTGVASAATVFHTVFRVDYGPHDHCFTGIQRWYNDRM
DSLLGIGPDQAQGRGTGVEEEMGRDRQTGDRAVK*
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