prot_L-elsbetiae_contig1470.3418.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1470.3418.1
Unique Nameprot_L-elsbetiae_contig1470.3418.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length259
Homology
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BLAST of mRNA_L-elsbetiae_contig1470.3418.1 vs. uniprot
Match: D7FTN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN6_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 5.010e-85
Identity = 136/177 (76.84%), Postives = 150/177 (84.75%), Query Frame = 0 
Query:   83 SSVHTLLRDRQRFGRPGFLARPGAGVWSPDPLHRAFAGSAHTLRRLELSGELRGHGGCVNTVSCTPDGRYWITGSDDMKLMIWDCESHVRKSSFSSGHHNNVFQARALPYTGNEKIVTCAADGQVRLTYLSRATSTLLGRHDGRAHRLAIEPGSPHRFMTCGEDGVVLSFDLRTSLS 259
            SS+HTLLR+RQR G   FL R G    S  PLH A+ G+ +TLRRLELSGELRGH GCVNTVSC+PDG+YWI+GSDD+KLMIWDCESH RK+SF S H NNVFQAR LPYT NEKIV+CAADGQVRLT LSR+TS LLG H+GRAHRLAIEPGSPHRFMTCGEDGVVLSFDLR  L+
Sbjct:  141 SSIHTLLRERQRRGAGRFLTREGRR--SVCPLHYAYGGNPNTLRRLELSGELRGHDGCVNTVSCSPDGKYWISGSDDLKLMIWDCESHKRKTSFHSRHQNNVFQARFLPYTDNEKIVSCAADGQVRLTNLSRSTSELLGEHEGRAHRLAIEPGSPHRFMTCGEDGVVLSFDLRAPLA 315
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BLAST of mRNA_L-elsbetiae_contig1470.3418.1 vs. uniprot
Match: A0A6H5KJD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJD8_9PHAE)

HSP 1 Score: 276 bits (705), Expect = 1.680e-83
Identity = 135/177 (76.27%), Postives = 149/177 (84.18%), Query Frame = 0 
Query:   83 SSVHTLLRDRQRFGRPGFLARPGAGVWSPDPLHRAFAGSAHTLRRLELSGELRGHGGCVNTVSCTPDGRYWITGSDDMKLMIWDCESHVRKSSFSSGHHNNVFQARALPYTGNEKIVTCAADGQVRLTYLSRATSTLLGRHDGRAHRLAIEPGSPHRFMTCGEDGVVLSFDLRTSLS 259
            SS+HTLLR+RQR G   FL R G    S  PLH A+ G+  TLRRLELSGELRGH GCVNTVSC+PDG+YWI+GSDD+KLMIWDCESH RK+SF S H NNVFQAR LPYT NEKIV+CAADGQVRLT LSR+TS LLG H+GRAHRLAIEPGSPHRFMTCGEDGVVLSFDLR  ++
Sbjct:  139 SSIHTLLRERQRRGAGRFLTREGRR--SVCPLHFAYGGNPITLRRLELSGELRGHEGCVNTVSCSPDGKYWISGSDDLKLMIWDCESHKRKTSFHSRHRNNVFQARFLPYTDNEKIVSCAADGQVRLTNLSRSTSELLGEHEGRAHRLAIEPGSPHRFMTCGEDGVVLSFDLRAPVA 313
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BLAST of mRNA_L-elsbetiae_contig1470.3418.1 vs. uniprot
Match: A0A059BEP2_EUCGR (Uncharacterized protein n=3 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059BEP2_EUCGR)

HSP 1 Score: 164 bits (414), Expect = 7.790e-44
Identity = 87/180 (48.33%), Postives = 112/180 (62.22%), Query Frame = 0 
Query:   87 TLLRDRQRFGRPGFLARPGAGVWSPDPLHRAFAGSAHTLR-------RLELSGELRGHGGCVNTVSCTPDGRYWITGSDDMKLMIWDCESHVRKSSFSSGHHNNVFQARALPYTGNEKIVTCAADGQVRLTYLSRATS---TLLGRHDGRAHRLAIEPGSPHRFMTCGEDGVVLSFDLRT 256
            T    R+R    G L  PG GVW  +    +  G ++  R       R E+  +L+ H GCVNT+S    G   ++GSDD ++++WD E    K SF SGHHNNVF A+ +PYT + +IVTCAADGQVR   L+ + S   +LL +H GRAHRLAIEPGSPH F +CGEDG+V  FDLRT
Sbjct:    7 TSASKRRRMSGRGGLDGPGGGVWLREIGGLSSRGFSYRHRASEDLVLRFEIYRKLKSHRGCVNTISFNSSGDILVSGSDDRQVIMWDWEIGNVKLSFHSGHHNNVFNAKIMPYTDDRRIVTCAADGQVRYAQLAESGSVKTSLLAKHHGRAHRLAIEPGSPHVFYSCGEDGLVQRFDLRT 186
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BLAST of mRNA_L-elsbetiae_contig1470.3418.1 vs. uniprot
Match: A0A540MC46_MALBA (Uncharacterized protein n=5 Tax=Maleae TaxID=721813 RepID=A0A540MC46_MALBA)

HSP 1 Score: 161 bits (408), Expect = 5.980e-43
Identity = 79/145 (54.48%), Postives = 104/145 (71.72%), Query Frame = 0 
Query:  115 HRAFAGSAHTLRRLELSGELRGHGGCVNTVSCTPDGRYWITGSDDMKLMIWDCESHVRKSSFSSGHHNNVFQARALPYTGNEKIVTCAADGQVRLTYL---SRATSTLLGRHDGRAHRLAIEPGSPHRFMTCGEDGVVLSFDLRT 256
            HR  AGS   + RLE+  +L  H GCVNTVS   DG   ++GSDD ++++W+ E+   + SF SGH+NN+FQA+ +PYT +  IVTCAADGQVR + +    +  ++LLGRH GRAH+LA+EPGSPH F TCGEDG+V  FDLRT
Sbjct:   31 HR-LAGSEDLVLRLEIFRKLEKHKGCVNTVSFNADGDILVSGSDDRRVILWNWETGKAQLSFHSGHNNNIFQAKIMPYTDDRTIVTCAADGQVRRSQILERGQVNTSLLGRHMGRAHKLAVEPGSPHIFYTCGEDGLVQHFDLRT 174
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BLAST of mRNA_L-elsbetiae_contig1470.3418.1 vs. uniprot
Match: A0A0E0MAB5_ORYPU (Integrase-type domain-containing protein n=12 Tax=Oryzinae TaxID=1648021 RepID=A0A0E0MAB5_ORYPU)

HSP 1 Score: 160 bits (405), Expect = 1.630e-42
Identity = 81/154 (52.60%), Postives = 102/154 (66.23%), Query Frame = 0 
Query:  107 GVWSPDPLHRAFAGSAHTLRRLELSGELRGHGGCVNTVSCTPDGRYWITGSDDMKLMIWDCESHVRKSSFSSGHHNNVFQARALPYTGNEKIVTCAADGQVRLTYLSRA---TSTLLGRHDGRAHRLAIEPGSPHRFMTCGEDGVVLSFDLRTS 257
            G+  P    R  A S   + RL++  +L  H GCVNTV    DG   I+GSDD  +M+WD ++   K  F SGH NNVFQAR +PYT ++ IVTCAADG+VRL  +       +TLLG HDGRAH+LAIEPGSP+ F +CGEDG+V  FDLRT+
Sbjct:   27 GLLLPRRFARRAAASEDLVMRLQVHRKLNRHTGCVNTVGFNADGDTLISGSDDQMVMLWDWDTGAIKLQFHSGHSNNVFQARFMPYTNDQTIVTCAADGEVRLAKIGDGGDVPTTLLGDHDGRAHKLAIEPGSPYIFYSCGEDGLVQHFDLRTN 180
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BLAST of mRNA_L-elsbetiae_contig1470.3418.1 vs. uniprot
Match: A0A2C9W099_MANES (Uncharacterized protein n=2 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9W099_MANES)

HSP 1 Score: 160 bits (404), Expect = 1.830e-42
Identity = 81/144 (56.25%), Postives = 100/144 (69.44%), Query Frame = 0 
Query:  115 HRAFAGSAHTLRRLELSGELRGHGGCVNTVSCTPDGRYWITGSDDMKLMIWDCESHVRKSSFSSGHHNNVFQARALPYTGNEKIVTCAADGQVRLTYLSRAT--STLLGRHDGRAHRLAIEPGSPHRFMTCGEDGVVLSFDLRT 256
            HR  A S   + RLE+  +L  H GCVNTVS   DG   ++GSDD ++++WD E+   K SF SGH+NNVFQA+ +PYT +  IVTCAADGQVR   +   T  + LL +H GRAH+LAIEPGSPH F TCGEDG+V  FDLRT
Sbjct:   31 HR-LAASEDLVLRLEIYKKLEKHRGCVNTVSFNADGDVLVSGSDDRRVILWDWETGRIKLSFHSGHNNNVFQAKIMPYTDDRSIVTCAADGQVRRAQILEHTVETALLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQHFDLRT 173
[Close]
BLAST of mRNA_L-elsbetiae_contig1470.3418.1 vs. uniprot
Match: A0A6A1UK90_9ROSI (DDB1-and CUL4-associated factor 8 n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1UK90_9ROSI)

HSP 1 Score: 160 bits (404), Expect = 2.310e-42
Identity = 82/148 (55.41%), Postives = 102/148 (68.92%), Query Frame = 0 
Query:  115 HRAFAGSAHTLRRLELSGELRGHGGCVNTVSCTPDGRYWITGSDDMKLMIWDCESHVRKSSFSSGHHNNVFQARALPYTGNEKIVTCAADGQVRLTYL---SRATSTLLGRHDGRAHRLAIEPGSPHRFMTCGEDGVVLSFDLRTSLS 259
            HR  A S   + RL+L  +L  H GCVNTVS    G   ++GSDD ++++WD E+  +K SF SGH NNVFQA+ +PYT +  IVTCAADGQVRL  +       + LL RHDGRAH+LAIEPGSPH F TCGEDG+V  FDLRT ++
Sbjct:   31 HRLGA-SEDLVCRLDLYKKLAKHRGCVNTVSFNAGGDILVSGSDDKRVVLWDWETGHKKLSFHSGHTNNVFQAKIMPYTDDRSIVTCAADGQVRLAQIPERGELETILLARHDGRAHKLAIEPGSPHIFYTCGEDGLVQHFDLRTRVA 177
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BLAST of mRNA_L-elsbetiae_contig1470.3418.1 vs. uniprot
Match: A0A2C9W0D6_MANES (Uncharacterized protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9W0D6_MANES)

HSP 1 Score: 160 bits (404), Expect = 3.070e-42
Identity = 81/144 (56.25%), Postives = 100/144 (69.44%), Query Frame = 0 
Query:  115 HRAFAGSAHTLRRLELSGELRGHGGCVNTVSCTPDGRYWITGSDDMKLMIWDCESHVRKSSFSSGHHNNVFQARALPYTGNEKIVTCAADGQVRLTYLSRAT--STLLGRHDGRAHRLAIEPGSPHRFMTCGEDGVVLSFDLRT 256
            HR  A S   + RLE+  +L  H GCVNTVS   DG   ++GSDD ++++WD E+   K SF SGH+NNVFQA+ +PYT +  IVTCAADGQVR   +   T  + LL +H GRAH+LAIEPGSPH F TCGEDG+V  FDLRT
Sbjct:   31 HR-LAASEDLVLRLEIYKKLEKHRGCVNTVSFNADGDVLVSGSDDRRVILWDWETGRIKLSFHSGHNNNVFQAKIMPYTDDRSIVTCAADGQVRRAQILEHTVETALLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQHFDLRT 173
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BLAST of mRNA_L-elsbetiae_contig1470.3418.1 vs. uniprot
Match: UPI000B8D0FE3 (DDB1- and CUL4-associated factor 8 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8D0FE3)

HSP 1 Score: 159 bits (402), Expect = 4.350e-42
Identity = 80/145 (55.17%), Postives = 101/145 (69.66%), Query Frame = 0 
Query:  115 HRAFAGSAHTLRRLELSGELRGHGGCVNTVSCTPDGRYWITGSDDMKLMIWDCESHVRKSSFSSGHHNNVFQARALPYTGNEKIVTCAADGQVRLTYL---SRATSTLLGRHDGRAHRLAIEPGSPHRFMTCGEDGVVLSFDLRT 256
            HR  A S   + RLE+  +L  H GCVNTVS   DG   ++GSDD ++M+WD E+   K +F SGHHNNVFQA+ +PY+ +  IVTCAADGQVR   +    +  ++LL RH GRAH+LAIEPGSPH F TCGEDG+V  FDLR+
Sbjct:   31 HRLGA-SEDLVLRLEIYKKLEKHRGCVNTVSFNADGDILVSGSDDKRVMLWDWETARVKLTFHSGHHNNVFQAKIMPYSDDRSIVTCAADGQVRHATILESGKVETSLLARHQGRAHKLAIEPGSPHIFYTCGEDGLVQHFDLRS 174
[Close]
BLAST of mRNA_L-elsbetiae_contig1470.3418.1 vs. uniprot
Match: A0A6A6N8Z2_HEVBR (Uncharacterized protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6N8Z2_HEVBR)

HSP 1 Score: 155 bits (392), Expect = 4.550e-42
Identity = 78/145 (53.79%), Postives = 99/145 (68.28%), Query Frame = 0 
Query:  115 HRAFAGSAHTLRRLELSGELRGHGGCVNTVSCTPDGRYWITGSDDMKLMIWDCESHVRKSSFSSGHHNNVFQARALPYTGNEKIVTCAADGQVRLTYL---SRATSTLLGRHDGRAHRLAIEPGSPHRFMTCGEDGVVLSFDLRT 256
            HR  A S   + RL++  +L  H GCVNTVS   DG   ++GSDD ++++WD E+   K SF SGH+NNVFQA+ +PYT +  IVTCAADGQVR   +       + LL +H G+AH+LAIEPGSPH F TCGEDG+V  FDLRT
Sbjct:   31 HR-LAASEDLVLRLDIYKKLDKHRGCVNTVSFNADGDILVSGSDDRRVILWDWETEHIKLSFHSGHNNNVFQAKIMPYTDDRSIVTCAADGQVRHAQILERGAVETALLAKHQGQAHKLAIEPGSPHIFYTCGEDGLVQHFDLRT 174
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1470.3418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTN6_ECTSI5.010e-8576.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJD8_9PHAE1.680e-8376.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A059BEP2_EUCGR7.790e-4448.33Uncharacterized protein n=3 Tax=Eucalyptus grandis... [more]
A0A540MC46_MALBA5.980e-4354.48Uncharacterized protein n=5 Tax=Maleae TaxID=72181... [more]
A0A0E0MAB5_ORYPU1.630e-4252.60Integrase-type domain-containing protein n=12 Tax=... [more]
A0A2C9W099_MANES1.830e-4256.25Uncharacterized protein n=2 Tax=Manihot esculenta ... [more]
A0A6A1UK90_9ROSI2.310e-4255.41DDB1-and CUL4-associated factor 8 n=1 Tax=Morella ... [more]
A0A2C9W0D6_MANES3.070e-4256.25Uncharacterized protein n=1 Tax=Manihot esculenta ... [more]
UPI000B8D0FE34.350e-4255.17DDB1- and CUL4-associated factor 8 n=1 Tax=Carica ... [more]
A0A6A6N8Z2_HEVBR4.550e-4253.79Uncharacterized protein n=1 Tax=Hevea brasiliensis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 213..253
e-value: 6.2
score: 12.0
coord: 127..166
e-value: 3.7E-7
score: 39.8
coord: 169..211
e-value: 14.0
score: 9.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 131..166
e-value: 5.4E-6
score: 27.0
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 134..166
score: 12.915
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 105..258
e-value: 3.9E-21
score: 77.2
NoneNo IPR availablePANTHERPTHR15574:SF32TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEINcoord: 110..257
NoneNo IPR availablePANTHERPTHR15574WD REPEAT DOMAIN-CONTAINING FAMILYcoord: 110..257
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 134..220
score: 13.422
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 126..256

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1470contigL-elsbetiae_contig1470:9368..14392 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1470.3418.1mRNA_L-elsbetiae_contig1470.3418.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1470 8656..14392 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1470.3418.1 ID=prot_L-elsbetiae_contig1470.3418.1|Name=mRNA_L-elsbetiae_contig1470.3418.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=259bp
MSSPAADAERRLIGPQQRDHRGHVSSASPGSDCSAERDPQSLPRPAVLQF
QRRPIMISASKKRPSSNRAAASLRHRPPRPPSSSVHTLLRDRQRFGRPGF
LARPGAGVWSPDPLHRAFAGSAHTLRRLELSGELRGHGGCVNTVSCTPDG
RYWITGSDDMKLMIWDCESHVRKSSFSSGHHNNVFQARALPYTGNEKIVT
CAADGQVRLTYLSRATSTLLGRHDGRAHRLAIEPGSPHRFMTCGEDGVVL
SFDLRTSLS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf