prot_L-elsbetiae_contig14628.3379.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14628.3379.1
Unique Nameprot_L-elsbetiae_contig14628.3379.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length120
Homology
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BLAST of mRNA_L-elsbetiae_contig14628.3379.1 vs. uniprot
Match: D8LME0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME0_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 1.400e-30
Identity = 67/97 (69.07%), Postives = 79/97 (81.44%), Query Frame = 0 
Query:   24 SSGRMAASASALLVALINLLASNGVLAEQVGNLTSLGHGYAMNLTNNSALENPFDDTYFNPASSIEVSADGTGVYVGGELGGLIHLARNAEDGSLTM 120
            S+ R+  SA+A+L  L+ LL + G LA+QVGNLT L  GY++NLT  S+L NPFDDT FNPAS+I VSADGTGVYVGGELGGLIHLAR+ EDGSLTM
Sbjct:    5 SNSRVTVSATAVLGVLVGLLTAEGALAQQVGNLTGLSRGYSVNLTG-SSLNNPFDDTSFNPASAIGVSADGTGVYVGGELGGLIHLARSPEDGSLTM 100
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14628.3379.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LME0_ECTSI1.400e-3069.07TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 41..50
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..50
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 29..40
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 51..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14628contigL-elsbetiae_contig14628:725..2125 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14628.3379.1mRNA_L-elsbetiae_contig14628.3379.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14628 725..2140 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14628.3379.1 ID=prot_L-elsbetiae_contig14628.3379.1|Name=mRNA_L-elsbetiae_contig14628.3379.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=120bp
MHRRAVRGGYGSFGASGAGFRCCSSGRMAASASALLVALINLLASNGVLA
EQVGNLTSLGHGYAMNLTNNSALENPFDDTYFNPASSIEVSADGTGVYVG
GELGGLIHLARNAEDGSLTM
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