prot_L-elsbetiae_contig14504.3310.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig14504.3310.1
Unique Name	prot_L-elsbetiae_contig14504.3310.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	161

Homology

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BLAST of mRNA_L-elsbetiae_contig14504.3310.1 vs. uniprot
Match: D7G616_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G616_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 3.150e-41
Identity = 86/109 (78.90%), Postives = 91/109 (83.49%), Query Frame = 0

Query:   45 ARKREAESTALRRRLRLLWKTLCGLLCLGTAVSTAVTVVAAVELRRHLGRSFFALPLSVHLLLDALMALTPLLAARADGEGEPPPPIPTSQVEFQRQLRAGRTIAQARR 153
            ARKRE +S  LRR LRLLWKTLCGLLCLG  VS AVT+VAA+ELRRHLGRSFFALPL+VHLLLDAL+AL PLL AR DG        PTSQVEFQRQLRAGRTIAQARR
Sbjct:   61 ARKRETQSALLRRHLRLLWKTLCGLLCLGAVVSAAVTLVAAIELRRHLGRSFFALPLAVHLLLDALLALIPLLVARGDGXXXXXXXGPTSQVEFQRQLRAGRTIAQARR 169

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig14504.3310.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig14504.3310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G616_ECTSI	3.150e-41	78.90	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 86..96
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..60
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 119..161
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 61..85
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 97..118
None	No IPR available	TMHMM	TMhelix		coord: 66..88

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig14504	contig	L-elsbetiae_contig14504:2625..4157 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig14504.3310.1	mRNA_L-elsbetiae_contig14504.3310.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig14504 2624..4157 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig14504.3310.1 ID=prot_L-elsbetiae_contig14504.3310.1|Name=mRNA_L-elsbetiae_contig14504.3310.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=161bp
NDGGYGDDREDEDERRGGDGAGEEDKAPLLATDGDARSERRARRARKREA
ESTALRRRLRLLWKTLCGLLCLGTAVSTAVTVVAAVELRRHLGRSFFALP
LSVHLLLDALMALTPLLAARADGEGEPPPPIPTSQVEFQRQLRAGRTIAQ
ARRRPQDDDGD