prot_L-elsbetiae_contig145.3300.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig145.3300.1
Unique Nameprot_L-elsbetiae_contig145.3300.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1042
Homology
BLAST of mRNA_L-elsbetiae_contig145.3300.1 vs. uniprot
Match: D7FQA4_ECTSI (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA4_ECTSI)

HSP 1 Score: 1090 bits (2819), Expect = 0.000e+0
Identity = 680/1013 (67.13%), Postives = 739/1013 (72.95%), Query Frame = 0
Query:    5 PPDAAKLASDLSQCIRNN--PSDAGRPGNRPPLKLLQWALGQLEECARTRSAPPSNVVEVAMDAIKDEIARPAGEQEQGPPVA-----PAVGAATGGGGAGNAGKGSCAEDKKPAGAGVGRV---KSKG-VVFTPLYGCEETATGVGPVSSILEVGGVTILLDCGWDIHFDTALLEPLREVVKKVDLVLISHSDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYLSRTHEGSFEAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALGTLTRPSVLITDAHNALTDG--------ESRKSREARLISTIMDTVRGGGNVLLPTDTAGRVLELLVLLDEHWQKHRLGSYKLVLLHNTAYNTAEFAKSQLEWMSEDIGRAFDLQRSNPFELKNVHIMHSLEELDELGNDPKVVLATDMSLDYGFSKALLIRWASGRANTILLTGRGHGSTTARDLRAKATARDRAAAEKVGRRQXXXXXXXXXXXXXXXXXXXXXXAAGXXXS-GYGAGVGV----------------EFGADEDEEGAEEAPLYVGIKMPVRVPLAGDELKAFRDEENRKRRLELEXXXXXXXXXXXXXXXVIADSDEGSDKEDDHADPAPKRRRAIIASLFSKYSKPQHLMFGYYDPQIPTDEYGVKENEPIGWLAEAMQRHNSEITTVAMQEAGAALQDAKRGGKKLKLQDGTSDRKRGEPSGGSGDDXXXXXXXXXXXXXXXXPPPEGQQEQPVDDLRAWAGEGKQSAFFQDSGAVPTKLEQEDQWLPVACRVVYVDSEGLSDGRAIKMTVINLAPKMLIVSGGQPRAKAELVSFVRHQLEPAAKNRKKRRRGRGDGVLGTAGRSGXXXXXXXXXXXXXXXXXXXXXXXXD-ACRFVVVNKAMKSLPVALDSGAFDVLLHDSLHTQLKWKQLNNYGVAHMECRVDSRGETPLLCAKPRGDKVGHPAMFLSLGHVNITP 980
            P DAA+LA DLS+ + N+   + A  PG + PLKLLQWAL QLEECARTRS P SNVVEVAM AIKDE+  PAGEQ+  PP A     PA    T    +G+A  GS +                +SKG VVFTPLYGC+E ATGV PVSSILEVGGVTILLDCGWDIHFDTALLEPLREVVK++DLVLISH DLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAY+SRTHEG+F+AFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYN++ ERHLR SALGTLTRPSVLITDAHNALT G          RK RE  LIST+MDTVRGGGNVLLPTDTAGRVLELLVLL+++WQKHRLGSYKLVLLHNTA+NT EFAKSQLEWMSEDIGRAFDLQRSNPFEL+NVHIMHSLEELDELG+DPKVV+ATDMSLD+GFSKALL+RWASG ANTILLTGRGHG+TTAR L AK+  R   A  +   +                       AAG     GY   VG                              A + V + +PVRVPLAG+ELKAFRDEENR       XXXXXXXXXXXXXXX                    KRRRAI+ASLFSKYSKPQHLMFGYYDP +PTDEYGVKE EPIGWLA AMQ+ NSE+                                           XXXXXXXXXXXXXXXX       E  VD LRA AGEGK+SAFFQDSGAVPTKLEQE Q L V CRVVYVDSEGLSDG ++K T + LAPKMLIV+GG  RAKAELVS+VRH +EPAA  R                R+ XXXXXXXXXXXXXXXXXXXXXXXXD ACRFVVVNKAM+ +PVALDSGAFDVLLHDSLHT LKWKQL+NYGVAH+ECRVD RG+ PLLCAKPR ++VGHPAMFLS+G VN+TP
Sbjct:    4 PLDAARLAHDLSKRMMNHHGATAAAVPG-KAPLKLLQWALSQLEECARTRSVPASNVVEVAMAAIKDEMGVPAGEQQ--PPAAGVAAHPASAPRT----SGSAVDGSSSXXXXXXXXXXXXXXXXRSKGKVVFTPLYGCDEGATGVEPVSSILEVGGVTILLDCGWDIHFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNNDHERHLRASALGTLTRPSVLITDAHNALTGGGMIRKDPSSKRKLREVELISTVMDTVRGGGNVLLPTDTAGRVLELLVLLNDYWQKHRLGSYKLVLLHNTAFNTCEFAKSQLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGDDPKVVMATDMSLDFGFSKALLLRWASGGANTILLTGRGHGNTTARTLIAKSEYRKSEAGRRAAAKDAAA-------------------AAGRGARVGYSGAVGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXASMVVPVTVPVRVPLAGEELKAFRDEENRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRRRAIVASLFSKYSKPQHLMFGYYDPHVPTDEYGVKETEPIGWLAAAMQQQNSEMPAAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPVVDALRASAGEGKESAFFQDSGAVPTKLEQEVQELEVLCRVVYVDSEGLSDGTSVKNTAVTLAPKMLIVTGGSRRAKAELVSYVRHAVEPAAAGR----------------RAXXXXXXXXXXXXXXXXXXXXXXXXXDVACRFVVVNKAMEPVPVALDSGAFDVLLHDSLHTHLKWKQLDNYGVAHVECRVDPRGDVPLLCAKPRAERVGHPAMFLSVGKVNVTP 974          
BLAST of mRNA_L-elsbetiae_contig145.3300.1 vs. uniprot
Match: A0A836CFV8_9STRA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV8_9STRA)

HSP 1 Score: 653 bits (1685), Expect = 6.200e-218
Identity = 408/943 (43.27%), Postives = 526/943 (55.78%), Query Frame = 0
Query:  124 VVFTPLYGC-EETATGVGPVSSILEVGGVTILLDCGWDIHFDTALLEPLREVVKKVDLVLISHSDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYLSRTHE--GSFEAFDLDDVDAAFARFKTLKFSQHLTFS--GRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALGTLTRPSVLITDAHNALT-DGESRKSREARLISTIMDTVRGGGNVLLPTDTAGRVLELLVLLDEHWQKHRLGSYKLVLLHNTAYNTAEFAKSQLEWMSEDIGRAFDLQRSNPFELKNVHIMHSLEELDELGNDPKVVLATDMSLDYGFSKALLIRWASGRANTILLTGRGHGSTTARDLRAKATARDRAAAEKVGRRQXXXXXXXXXXXXXXXXXXXXXXAAGXXXSGYGAGVGVEFGADEDEEGAEEAPLY-VGIKMPVRVPLAGDELKAFRDEENRKRRLELEXXXXXXXXXXXXXXXVIADSDEGSDKEDDHADPAP--KRRRAIIASLFSKYSKPQHLMFGYYDPQIPTDEYGVKENEPIGWLAEAMQRHNSEITTVAMQEAGAALQDAKRGGKKLKLQDGTSDRKRG--EPSGGSGDDXXXXXXXXXXXXXXXXPPPEGQQEQPVDDLRAWAGEGKQSAFFQDSGAVPTKLEQEDQWLPVACRVVYVDSEGLSDGRAIKMTVINLAPKMLIVSGGQPRAKAELVSFVRHQLEPAAKNRKKRRRGRGDGVLGTAGRSGXXXXXXXXXXXXXXXXXXXXXXXXDACRFVVVNKAMKSLPVALDSGAFDVLLHDSLHTQLKWKQLNNYGVAHMECRV----------DSRGETPLLCAKPRGDK----VGHPAMFLSLGHVNITPLQQAFKDAGVAVKFVGGGTLECEGGAVTVSLGKGGKLEIEGPLSDEYFRVREVVYRQYAIV 1041
            V FTPLYGC ++T  G GPV S+LEVG VTILLDCGWDI FD +LL PL  VV +VDLVLISH+DLEHLGGLPYA GKLG++A V+ATLP  KMGQM VYDA+  R+ E  G+F+AF LDD DAAF RF+ LK+SQHL FS  GRGAGVTITPYAAG +IG ++WR+ WQT+DNDIVYA +YNH RE HL   A+ TL+RPS++ITDAH  LT   +  + R + L   +  TVR GGNVLLP DTAGRVLELL+LLD HW +++LGSY LVLLH+ A+NT EFAKSQLEWMS+ I + FDLQRSNPFE+++V + HSLEEL  LG  P VVLATD+SLD+GF+KALL+ WA+   N +LLT RGHG + AR+L    TA  RAAA                             AAG                     G EEAP   + +++P RVPL G+EL A+ +E          XXXXXXX         +ADS          A  A   KRRR + ASLFSK+SKPQHLMFG++D  +  D+YGV+E EPI WLA +MQ  N   T+  + E G          ++L  Q  T+       +  G S  D                               A       SAF++D+G +P+K+  +++ L V  RV Y+D EGLSDGR+++  +  + P+ L++ GG  +A + L    R +                                                     C  V   ++  ++  ALD+  FDVL+HDSL+T+L+W+ +  Y +A ++  V            R   P     P  D+     G PA+F+S G V +T L  A + AG+              G + V+ G  G L+I+GPLSD YF VR ++YRQY IV
Sbjct:   48 VTFTPLYGCFDDTGRGAGPVCSLLEVGDVTILLDCGWDIDFDESLLAPLASVVSRVDLVLISHADLEHLGGLPYAVGKLGLKAPVFATLPTLKMGQMTVYDAHQMRSLEANGTFKAFTLDDADAAFERFQPLKYSQHLRFSEGGRGAGVTITPYAAGHIIGGSLWRICWQTDDNDIVYAVSYNHRREEHLNGGAVETLSRPSIMITDAHQVLTMQPKPPRKRASDLTEMVTATVRKGGNVLLPCDTAGRVLELLLLLDHHWTRNKLGSYPLVLLHSMAFNTGEFAKSQLEWMSDAISKQFDLQRSNPFEMRHVAMAHSLEELQALGTGPMVVLATDLSLDFGFAKALLLAWAADPLNLVLLTQRGHGDSVARELLRGVTAHVRAAA-----------------------------AAG---------------------GVEEAPKQRIVVEVPERVPLVGEELTAYLEEXXXXXXXXXXXXXXXXXAEEMERGQGLADSXXXXXXXXXXAAVAHVNKRRRLVNASLFSKFSKPQHLMFGFHDAMVEVDDYGVREAEPIAWLAVSMQERND--TSGLIHEEGQ---------RRLLEQQATAAHLSSAMQVVGLSDADGAVSAAT----------------------AAAQTALRSDSAFYEDTGVLPSKVVLQERELVVRARVAYIDMEGLSDGRSVRNLLATVGPRQLVLVGGSVKAVSALSEDARDR---------------------------------------------------HICSAVFTPRSGDTVRAALDTDVFDVLVHDSLYTRLRWQSVKGYELAQVDSAVAPQPRPSGVLGKRERPPPPILFPPQDREEGETGRPAVFVSFGDVQLTQLSTALRKAGMTTALAAAKLTVS--GTIVVTKGADGLLKIDGPLSDTYFAVRSIMYRQYTIV 854          
BLAST of mRNA_L-elsbetiae_contig145.3300.1 vs. uniprot
Match: A0A6U9RRA8_9CHLO (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9RRA8_9CHLO)

HSP 1 Score: 374 bits (959), Expect = 3.250e-112
Identity = 186/361 (51.52%), Postives = 244/361 (67.59%), Query Frame = 0
Query:  126 FTPLYGCEETATGVGPVSSILEVGGVTILLDCGWDIHFDTALLEPLREVVKKVDLVLISHSDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYLSRTHEGSFEAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALGTLTRPSVLITDAHNALTDGESRKSREARLISTIMDTVRGGGNVLLPTDTAGRVLELLVLLDEHWQKHRLGSYKLVLLHNTAYNTAEFAKSQLEWMSEDIGRAFDLQRSNPFELKNVHIMHSLEELDELGNDPKVVLATDMSLDYGFSKALLIRWASGRANTILLTGRGHGST 486
            F PL G      G  P+  +LEV     LLDCGWD   +   L+ L   V+KVD VL+SH+D +HLG LPYA GKLG+   VYATLPV KMGQM +YD YLS+  E  +E F+L+DVD AF  F  ++++Q +  +G+G G+TITP+ AG  +G   WR++ + ED  I+YA  YNH +ERHL  +AL T  RP+VLITDA+N LT+  SRK R+  L++ +M T+R GGNVL+P DTA RVLELL++LD HW+  ++G Y LVLL+N AYN  EFAKS LE+M+ DI ++F+  R N F+ KNVH+ HSLEEL+EL + PKVVLA+  SL+ G  + LL+ WAS   N IL   R    T
Sbjct:   18 FVPLCGVH----GQEPMCYLLEVDAFVFLLDCGWDDRTEVMDLKELEAHVEKVDAVLVSHADTKHLGALPYAVGKLGLDCPVYATLPVHKMGQMVLYDLYLSKRAEEEYETFNLNDVDRAFGMFNPMRYAQQINLTGKGEGITITPFPAGHSVGGTTWRITKEAED--ILYAVDYNHRKERHLNGAALHTFNRPAVLITDAYNGLTEQTSRKLRDRTLVAGVMQTLRSGGNVLIPVDTATRVLELLLVLDSHWEHQKIGLYSLVLLNNVAYNVVEFAKSMLEFMNSDISKSFEHTRDNVFDCKNVHLCHSLEELEELPDQPKVVLASMASLEAGLGRNLLVDWASDPDNLILFVERAQAGT 372          
BLAST of mRNA_L-elsbetiae_contig145.3300.1 vs. uniprot
Match: A0A6B2KYM6_9EUKA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KYM6_9EUKA)

HSP 1 Score: 369 bits (946), Expect = 3.890e-110
Identity = 192/368 (52.17%), Postives = 249/368 (67.66%), Query Frame = 0
Query:  124 VVFTPLYGCEETATGVGPVSSILEVGGVTILLDCGWDIHFDTALLEPLREVVKKVDLVLISHSDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYLSRTHEGSFEAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALGTLTRPSVLITDAHNALTDGESRKSREARLISTIMDTVRGGGNVLLPTDTAGRVLELLVLLDEHWQKHRLGSYKLVLLHNTAYNTAEFAKSQLEWMSEDIGRAFDLQRSNPFELKNVHIMHSLEELDELGNDPKVVLATDMSLDYGFSKALLIRWASGRANTILLTGRGHGSTTARDL 491
            + F+PL G    A    P+  +LE+    ILLDCGW+  +D  LL+PL+ VV K++ VLISH DL HLG LPYA GKLG++AK+  T+PV+KMGQM +YDAY SR +   F  F+LDDVDAAF  F  LK+SQ  T SG+G  + ITPYAAG +IG  +W++  +T++  I+YA  YNH +ERHL P+ L TLT+P++LITDA NAL   +SR +R++ LI +I  T+R GGNVLLP DTAGRVLELLV+LD+HW  H   SY L+ L+N AYNT EFAKSQLEWMSE I   F   R N F+  NV + H   E++E  + PKVVLA+  SL+ GF++ + + W S   N I+ T      T AR L
Sbjct:    5 IKFSPLCG----AYNEDPLCYLLEIDEYRILLDCGWNDDYDVQLLKPLKRVVGKINAVLISHPDLHHLGALPYAVGKLGLKAKIIGTIPVYKMGQMFMYDAYQSRQNSEEFTVFNLDDVDAAFDNFVQLKYSQRYTLSGKGIKLEITPYAAGHLIGGTIWKIKRETDE--IIYAVDYNHKKERHLSPTILETLTQPTLLITDALNALNSQDSRGNRDSLLIESITSTLRAGGNVLLPVDTAGRVLELLVILDQHWS-HFHYSYPLLFLNNVAYNTIEFAKSQLEWMSEAIMNKFISHRENCFQFSNVKLCHKTSEVNEFPS-PKVVLASMSSLNSGFAQDIFVEWCSDAKNRIIFTDTSRPGTIARRL 364          
BLAST of mRNA_L-elsbetiae_contig145.3300.1 vs. uniprot
Match: A0A5J5AUY9_9ASTE (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Nyssaceae TaxID=4289 RepID=A0A5J5AUY9_9ASTE)

HSP 1 Score: 361 bits (926), Expect = 2.290e-107
Identity = 262/916 (28.60%), Postives = 406/916 (44.32%), Query Frame = 0
Query:  141 PVSSILEVGGVTILLDCGWDIHFDTALLEPLREVVKKVDLVLISHSDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYLSRTHEGSFEAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALGTLTRPSVLITDAHNALTDGESRKSREARLISTIMDTVRGGGNVLLPTDTAGRVLELLVLLDEHWQKHRLGSYKLVLLHNTAYNTAEFAKSQLEWMSEDIGRAFDLQRSNPFELKNVHIMHSLEELDELGNDPKVVLATDMSLDYGFSKALLIRWASGRANTILLTGRGHGSTTARDLRAKATARDRAAAEKVGRRQXXXXXXXXXXXXXXXXXXXXXXAAGXXXSGYGAGVGVEFGADEDEEGAEEAPLYVGIKMPVRVPLAGDELKAFRDEENRKRRLEL--------EXXXXXXXXXXXXXXXVIADSDEGSDKEDDHADPAPKRRRAIIASLFSKYSKPQHLMFGYYDPQIPTDEYGVKENEPIGWLAEAMQRHNSEITTVAMQEAGAALQDAKRGGKKLKLQDGTSDRKRGEPSGGSGDDXXXXXXXXXXXXXXXXPPPEGQQEQPVDDLRAWAGEGKQSAFFQDSGAVPTKLEQEDQWLPVACRVVYVDSEGLSDGRAIKMTVINLAPKMLIVSGGQPRAKAELVSFVRHQLEPAAKNRKKRRRGRGDGVLGTAGRSGXXXXXXXXXXXXXXXXXXXXXXXXDACRFVVVNKAMKSLPVALDSGAFDVLLHDSLHTQLKWKQLNNYGVAHMECRVDSRGETPLLCAKPRGDKVG-HPAMFLSLGHVNITPLQQAFKDAGVAVKFVGGGTLECEGGAVTVSLG----KGG-----KLEIEGPLSDEYFRVREVVYRQY 1038
            P+S ++ + G   L+DCGW+ HFD +LL PL  V   +D VL+SHSD  HLG LPYA  +LG+ A VY+T PV+++G + +YD YLSR     FE F LDD+D+AF     L +SQ+   SG+G G+ I P+ AG ++G  VW+++   ED  ++YA  +NH +ERHL  + L +  RP+VLITDA+NAL +  SR+ R+   +  I+ T+R  GNVLLP DTAGRVLELL++L+++W +  L +Y +  L   A +T ++ KS LEWMS+ I ++F+  R N F LK+V ++ +  EL+++ + PK+VLA+  SL+ GFS  + + WA+   N +L T RG  +T AR L+                                                                 A+  P  V + M  RVPL G+EL A+ +E+NR ++ E         +               ++ D+   +    D A P     R I+   F   S     MF +Y+     D++G   N P  ++ +       ++   AMQ  G                                                              DL     EG            P+K+   +  + V C +VY+D EG SDGR+IK  + ++AP  L++  G   A         H  E   K+                                              C  V   +  + + V  D  A+ V L + L + + +K+L +Y +A ++  V  + E  +L   P       H ++F+  G + +   +Q     G+ V+F GG  L C        +G    KGG     ++ IEGPLS+EY+++RE +Y+Q+
Sbjct:   18 PLSYLVSIDGFNFLVDCGWNDHFDPSLLRPLARVASSIDAVLLSHSDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDHYLSRKQVSDFELFTLDDIDSAFQNVTRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGED--VIYAVDFNHRKERHLNGTVLESFVRPAVLITDAYNALNNQPSRRQRDQEFLDAILRTLRADGNVLLPVDTAGRVLELLLILEQYWVQQHL-TYPIFFLTYVASSTVDYVKSFLEWMSDSIAKSFEHTRDNAFLLKHVTLLINESELEKVPDGPKIVLASMASLEAGFSHDIFVAWAADVKNLVLFTERGQFATLARMLQ-----------------------------------------------------------------ADPPPKAVKVTMSKRVPLVGEELAAYEEEQNRIKKEEALKASLIKEDESKSSHGPDLTMGDPMVVDT-SSTHALSDVAGPTSGGYRDILLDGFVPPSSSVAPMFPFYENSSEWDDFGEVIN-PDDYIIK-----EEDLDRTAMQVGG--------------------------------------------------------------DLNGKLDEGSAGLILDTK---PSKVVSNELTVQVKCLLVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEA-------TEHLKEHCLKH---------------------------------------------VCPHVYAPQIEEMIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAEV-GKTENGMLSLLPLSTPAPPHKSVFV--GDIKMADFKQFLASKGIQVEFAGG-ALRCGEYVTLRKVGDASQKGGGAGIQQIVIEGPLSEEYYKIREYLYQQF 737          
BLAST of mRNA_L-elsbetiae_contig145.3300.1 vs. uniprot
Match: C1FDL7_MICCC (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FDL7_MICCC)

HSP 1 Score: 362 bits (928), Expect = 6.290e-107
Identity = 187/368 (50.82%), Postives = 246/368 (66.85%), Query Frame = 0
Query:  124 VVFTPLYGCEETATGVGPVSSILEVGGVTILLDCGWDIHFDTALLEPLREVVKKVDLVLISHSDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYLSRTHEGSFEAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALGTLTRPSVLITDAHNALTDGESRKSREARLISTIMDTVRGGGNVLLPTDTAGRVLELLVLLDEHWQKHRLGSYKLVLLHNTAYNTAEFAKSQLEWMSEDIGRAFDLQRSNPFELKNVHIMHSLEELDELGNDPKVVLATDMSLDYGFSKALLIRWASGRANTILLTGRGHGSTTARDL 491
            + F+PLYG +    G  P   +L++ G  ILLDCGW+  FD  LLEPL +V  +VD VLISH D EHLG LPYAFGKLGMR KVYATLPV KMG M +YD +LSR     F  F LDD+D AF+ F  ++++Q     G GAG+TITPYAAG M+G A+W+V  +T+D  +VYA  +NH RE+HL  + L ++ RP+VLITDA NA     S K+RE  LI  I+ TVR  GNVL+P D AGRVLELL++L+E W + +L +Y+LVLL   AYNT EFA+S LEWM E +G+ FD +R N F  +++ + HS++E   L   PKVVLA+  SLD G S+ + + WA    N I+ T R    + +R++
Sbjct:    8 IKFSPLYGVQ--GIGEDPFCYVLDLDGFKILLDCGWNDSFDVNLLEPLAKVAAEVDAVLISHPDTEHLGALPYAFGKLGMRCKVYATLPVHKMGLMFMYDHFLSRNANEDFRVFTLDDIDTAFSAFVPVRYAQRSALVGHGAGITITPYAAGHMLGGALWKVHKETDD--VVYAVNFNHRREKHLNGTVLESIKRPAVLITDASNARRLPPS-KTRENDLIEAILRTVRQDGNVLIPIDPAGRVLELLLVLEERWSQKQLAAYQLVLLTKVAYNTLEFARSHLEWMGEHVGQYFDRERHNAFNTRHLKLCHSIDEFRALPQGPKVVLASFGSLDAGASRHIFVEWAPDPRNLIVFTDRLQPGSLSREV 370          
BLAST of mRNA_L-elsbetiae_contig145.3300.1 vs. uniprot
Match: A0A7S0N1Z8_9CHLO (Cleavage and polyadenylation specificity factor subunit 2 (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N1Z8_9CHLO)

HSP 1 Score: 350 bits (897), Expect = 6.580e-107
Identity = 189/391 (48.34%), Postives = 256/391 (65.47%), Query Frame = 0
Query:  124 VVFTPLYGCEETATGVGPVSSILEVGGVTILLDCGWDIHFDTALLEPLREVVKKVDLVLISHSDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYLSRTHEGSFEAFDLDDVDAAFARFKTLKFSQH--LTFS-GRG--AGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALGTLTRPSVLITDAHNALTDGESRKSREARLISTIMDTVRGGGNVLLPTDTAGRVLELLVLLDEHWQKHRLGSYKLVLLHNTAYNTAEFAKSQLEWMSEDIGRAFDLQRSNPFELKNVHIMHSLEELDELGNDPKVVLATDMSLDYGFSKALLIRWASGRANTILLTGRGHGSTTARD-LRAKATARDRAAAEKVGR 508
            + FTPL G         P+S +LE+    ILLDCGW+   D A ++P+ + V ++D VL+SHSD  HLG LPY  GK G++A VYATLPV KMGQM +YD YLSR       AFDLDDVDAAFA    LK+SQH  LT S GR   A VT+TPY AG ++G  +W++S +TED  +VYA  +NH +ERHL  + L +  RPS+LITDA NA     +R +R+  L  T+   +RGGG+VL+P DTAGRVLEL++ L+++W   +L SYKLVLL N AYNT EFAKS +EWM++ I   FD  R+N F+ +++H+ HS+EEL  LG  PK+V+A+  SL+ G ++ L + WA+   N +L    G  +T AR+ +R  A A     A+++ R
Sbjct:    7 IQFTPLNGAHSET----PLSYLLEIDDFKILLDCGWNDKLDLADIQPIVDRVPEIDAVLLSHSDTTHLGALPYLVGKKGLKAPVYATLPVHKMGQMYMYDHYLSRQAGEDQTAFDLDDVDAAFALITPLKYSQHVHLTASHGRSTSAAVTVTPYNAGHLLGGTLWKISKETED--VVYAVDFNHKKERHLNGTVLESFNRPSLLITDAFNAANRPPARAARDKELTDTVAKVLRGGGSVLIPIDTAGRVLELVLHLEQYWTVAKLASYKLVLLTNVAYNTMEFAKSHIEWMNDAISTTFDQTRTNAFKTRHLHLCHSVEELAGLGPGPKLVMASMQSLEVGPARELFVTWATNPRNLLLFPDMGQPNTLAREVMRCTAAAPQAPDAQRLHR 391          
BLAST of mRNA_L-elsbetiae_contig145.3300.1 vs. uniprot
Match: A0A7J6W0C6_THATH (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6W0C6_THATH)

HSP 1 Score: 357 bits (915), Expect = 8.500e-106
Identity = 268/936 (28.63%), Postives = 409/936 (43.70%), Query Frame = 0
Query:  124 VVFTPLYGCEETATGVGPVSSILEVGGVTILLDCGWDIHFDTALLEPLREVVKKVDLVLISHSDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYLSRTHEGSFEAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALGTLTRPSVLITDAHNALTDGESRKSREARLISTIMDTVRGGGNVLLPTDTAGRVLELLVLLDEHWQKHRLGSYKLVLLHNTAYNTAEFAKSQLEWMSEDIGRAFDLQRSNPFELKNVHIMHSLEELDELGNDPKVVLATDMSLDYGFSKALLIRWASGRANTILLTGRGHGSTTARDLRAKATARDRAAAEKVGRRQXXXXXXXXXXXXXXXXXXXXXXAAGXXXSGYGAGVGVEFGADEDEEGAEEAPLYVGIKMPVRVPLAGDELKAFRDEENRKRRLEL--------EXXXXXXXXXXXXXXXVIADSDEGSDKEDDHADPAPKRRRAIIASLFSKYSKPQHLMFGYYDPQIPTDEYGVKENEPIGWLAEAMQRHNSEITTVAMQEAGAALQDAKRGGKKLKLQDGTSDRKRGEPSGGSGDDXXXXXXXXXXXXXXXXPPPEGQQEQPVDDLRAWAGEGKQSAFFQDSGAVPTKLEQEDQWLPVACRVVYVDSEGLSDGRAIKMTVINLAPKMLIVSGGQPRAKAELVSFVRHQLEPAAKNRKKRRRGRGDGVLGTAGRSGXXXXXXXXXXXXXXXXXXXXXXXXDACRFVVVNKAMKSLPVALDSGAFDVLLHDSLHTQLKWKQLNNYGVAHMECRVDSRGETPLLCAKPRGDKVG-HPAMFLSLGHVNITPLQQAFKDAGVAVKFVGGGTLECEGGAVTVSLG----KGG-----KLEIEGPLSDEYFRVREVVYRQYAIV 1041
            V  TPL G    A    P+S ++ + G  +L+DCGW+  FD +LLEPL  V  K+D VL+SH D  HLG LPYA  +LG+ A +Y+T PV+++G + +YD YLSR     FE F+LDD+D+AF     L +SQ+   S +G G+ I P+ AG ++G  VWR++   ED  ++YA  +NH +ERHL  + L +  RP+VLITDA+NAL +  S + R+ + +  I +T+R  GNVLLP DTAGRVLE+L++L+++W ++ L SY + LL   A +T ++ KS LEWMS+ I ++F+  R N F LK+V  + S +EL+ +   PKVVLA+  SL+ GFS  + + WA+ + N +L T RG   T AR L+                                                                 ++  P  V + M  RVPL G+EL+A+ +E+NR ++ E         E               ++ D         D        RR I    F   S     MF +Y+     D++G   N     + E       ++    MQ  G                DG  D                                                E   +  F      P+K+  E+  + V C  VY+D EG SDGR+IK  + ++AP  L++  G   A         H  E   K+                                              C  V   K  +++ V  D  A+ V L + L + + +K+L +Y +A  +  +    E  +L   P       H ++F+  G + +   +Q     G+ V+F  GG L C        +G    KGG     ++ IEGPL++EY+++RE +Y Q+ ++
Sbjct:    5 VQVTPLGG----AYNENPLSYLISIDGFNLLVDCGWNDRFDESLLEPLTSVSSKIDAVLLSHPDTVHLGALPYAMKRLGLSAPIYSTEPVYRLGLLTMYDHYLSRQQVSDFELFNLDDIDSAFQSITRLTYSQNYHLSEKGEGIVIAPHVAGHLLGGTVWRITKDGED--VIYAVDFNHRKERHLNGTVLESFVRPAVLITDAYNALNNQLSTRQRDQKFLELIWNTLRDDGNVLLPVDTAGRVLEILLILEQYWTQNHL-SYPIFLLTYVATSTFDYVKSFLEWMSDAIAKSFEQSRENAFLLKHVTPILSKQELENVPGGPKVVLASMASLECGFSHDIFVEWATNKKNLVLFTERGQYGTKARMLQ-----------------------------------------------------------------SDPPPKAVKVTMSKRVPLVGEELRAYEEEQNRIKKEEASKAILSKEEDLKASHGSDVNLGDPMVVDQSNAL-ASSDVTGLQSGGRRDIFIDGFVPPSTSGAPMFPFYENSSEWDDFGEIINPDDYVIKE------EDMDQAYMQVGG----------------DGKFD------------------------------------------------ENSANLIFDSK---PSKVVSEELTVQVKCSSVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSNEA-------TDHLKEHCTKH---------------------------------------------VCPHVYAPKIGETIDVTSDLCAYKVQLSERLMSNVLFKKLGDYEIAWADAEIGKSTEDDMLSLLPLSTPPPPHKSVFV--GDLKLADFKQFLSSKGIQVEF-SGGALRCGENVTLRKVGDASQKGGVAGAQQVFIEGPLTEEYYKIREYLYSQFYLL 739          
BLAST of mRNA_L-elsbetiae_contig145.3300.1 vs. uniprot
Match: A0A6B2L931_9EUKA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L931_9EUKA)

HSP 1 Score: 343 bits (879), Expect = 1.240e-105
Identity = 178/342 (52.05%), Postives = 234/342 (68.42%), Query Frame = 0
Query:  124 VVFTPLYGCEETATGVGPVSSILEVGGVTILLDCGWDIHFDTALLEPLREVVKKVDLVLISHSDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYLSRTHEGSFEAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALGTLTRPSVLITDAHNALTDGESRKSREARLISTIMDTVRGGGNVLLPTDTAGRVLELLVLLDEHWQKHRLGSYKLVLLHNTAYNTAEFAKSQLEWMSEDIGRAFDLQRSNPFELKNVHIMHSLEELDELGNDPKVVLATDMSLDYGFSKALL 465
            + F+PL G    A    P+  +LE+    ILLDCGW+  +D  LL+PL+ VV K++ VLISH DL HLG LPYA GKLG++AK+  T+PV+KMGQM +YDAY SR +   F  F+LDDVDAAF  F  LK+SQ  T SG+G  + ITPYAAG +IG  +W++  +T++  I+YA  YNH +ERHL P+ L TLT+P++LITDA NAL   +SR +R++ LI +I  T+R GGNVLLP DTAGRVLELLV+LD+HW  H   SY L+ L+N AYNT EFAKSQLEWMSE I   F   R N F+  NV + H   E++E  + PK+ L + + +    S +L+
Sbjct:    5 IKFSPLCG----AYNEDPLCYLLEIDEYRILLDCGWNDDYDVQLLKPLKRVVGKINAVLISHPDLHHLGALPYAVGKLGLKAKIIGTIPVYKMGQMFMYDAYQSRQNSEEFTVFNLDDVDAAFDNFVQLKYSQRYTLSGKGIKLEITPYAAGHLIGGTIWKIKRETDE--IIYAVDYNHKKERHLSPTILETLTQPTLLITDALNALNSQDSRGNRDSLLIESITSTLRAGGNVLLPVDTAGRVLELLVILDQHWS-HFHYSYPLLFLNNVAYNTIEFAKSQLEWMSEAIMNKFISHRENCFQFSNVKLCHKTSEVNEFPS-PKISLWSGVLMQRTESSSLI 338          
BLAST of mRNA_L-elsbetiae_contig145.3300.1 vs. uniprot
Match: K3WHC0_GLOUD (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHC0_GLOUD)

HSP 1 Score: 355 bits (911), Expect = 3.530e-105
Identity = 176/358 (49.16%), Postives = 253/358 (70.67%), Query Frame = 0
Query:  124 VVFTPLYGCEETATGVGPVSS-ILEVGGVTILLDCGWDIHFDTALLEPLREVVKKVDLVLISHSDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYLSRTH-EGSFEAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALGTLTRPSVLITDAHNALTDGESRKSREARLISTIMDTVRGGGNVLLPTDTAGRVLELLVLLDEHWQKHRLGSYKLVLLHNTAYNTAEFAKSQLEWMSEDIGRAFDLQRSNPFELKNVHIMHSLEELDELGNDPKVVLATDMSLDYGFSKALLIRWASGRANTILLT 479
            + FTPLYG   +     P  + +LE+  V ILLDCGW   +DT LL+PL+ V+ ++DLVLISH DL H+G LPYA GKLG++A +Y TLPV +MGQ+A+YDAY ++T  +G F  F LDDVDA F  FK LK+S+ LT +  G G+ ITP+ AG +IG ++WR+  +T+D  I+YA  YNH  E  L+ + L + TRP++LITD+ N  ++    K R+++++  I+ TVRGGGNVL+PTD++GRVLEL+ +LD++W +++L    + LLH+ +Y T + A++ LEW +E I + FD+ R NPF+  ++H++HSLEELD L + PKVVL T  SL+ GF+K L IRWAS + N+I+ T
Sbjct:    4 ITFTPLYGVHSS----DPCCAYLLEIDDVCILLDCGWTDQYDTELLKPLQRVIDRIDLVLISHLDLAHMGALPYAIGKLGLKAPIYGTLPVHRMGQIALYDAYQAKTKSDGDFALFTLDDVDAVFENFKQLKYSEKLTLTSSGEGIVITPHVAGHLIGGSLWRIEKETDD--IIYAVDYNHRSEHVLQKTILDSFTRPTLLITDSMNIHSEQPKLKDRDSKIMVEILKTVRGGGNVLIPTDSSGRVLELMRVLDQYWIQNKLRD-PIALLHDMSYYTPKAAQAMLEWCNERIAKNFDVGRQNPFQFSHIHLIHSLEELDNLPS-PKVVLTTSSSLECGFAKDLFIRWASDQRNSIIFT 353          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig145.3300.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQA4_ECTSI0.000e+067.13Cleavage and polyadenylation specificity factor su... [more]
A0A836CFV8_9STRA6.200e-21843.27Cleavage and polyadenylation specificity factor su... [more]
A0A6U9RRA8_9CHLO3.250e-11251.52Cleavage and polyadenylation specificity factor su... [more]
A0A6B2KYM6_9EUKA3.890e-11052.17Cleavage and polyadenylation specificity factor su... [more]
A0A5J5AUY9_9ASTE2.290e-10728.60Cleavage and polyadenylation specificity factor su... [more]
C1FDL7_MICCC6.290e-10750.82Cleavage and polyadenylation specificity factor su... [more]
A0A7S0N1Z8_9CHLO6.580e-10748.34Cleavage and polyadenylation specificity factor su... [more]
A0A7J6W0C6_THATH8.500e-10628.63Cleavage and polyadenylation specificity factor su... [more]
A0A6B2L931_9EUKA1.240e-10552.05Cleavage and polyadenylation specificity factor su... [more]
K3WHC0_GLOUD3.530e-10549.16Cleavage and polyadenylation specificity factor su... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 583..615
IPR022712Beta-Casp domainSMARTSM01027Beta_Casp_2coord: 367..491
e-value: 4.0E-26
score: 102.8
IPR022712Beta-Casp domainPFAMPF10996Beta-Caspcoord: 367..491
e-value: 6.6E-19
score: 68.2
IPR025069Cleavage and polyadenylation specificity factor 2, C-terminalPFAMPF13299CPSF100_Ccoord: 971..1038
e-value: 6.8E-10
score: 39.4
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeGENE3D3.60.15.10coord: 132..379
e-value: 1.1E-70
score: 239.7
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 136..841
IPR001279Metallo-beta-lactamasePFAMPF16661Lactamase_B_6coord: 145..313
e-value: 2.2E-55
score: 187.1
IPR027075Cleavage and polyadenylation specificity factor subunit 2PANTHERPTHR45922FAMILY NOT NAMEDcoord: 124..1041

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig145contigL-elsbetiae_contig145:23699..35951 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig145.3300.1mRNA_L-elsbetiae_contig145.3300.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig145 23504..35956 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig145.3300.1 ID=prot_L-elsbetiae_contig145.3300.1|Name=mRNA_L-elsbetiae_contig145.3300.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1042bp
MLVPPPDAAKLASDLSQCIRNNPSDAGRPGNRPPLKLLQWALGQLEECAR
TRSAPPSNVVEVAMDAIKDEIARPAGEQEQGPPVAPAVGAATGGGGAGNA
GKGSCAEDKKPAGAGVGRVKSKGVVFTPLYGCEETATGVGPVSSILEVGG
VTILLDCGWDIHFDTALLEPLREVVKKVDLVLISHSDLEHLGGLPYAFGK
LGMRAKVYATLPVWKMGQMAVYDAYLSRTHEGSFEAFDLDDVDAAFARFK
TLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAY
NHNRERHLRPSALGTLTRPSVLITDAHNALTDGESRKSREARLISTIMDT
VRGGGNVLLPTDTAGRVLELLVLLDEHWQKHRLGSYKLVLLHNTAYNTAE
FAKSQLEWMSEDIGRAFDLQRSNPFELKNVHIMHSLEELDELGNDPKVVL
ATDMSLDYGFSKALLIRWASGRANTILLTGRGHGSTTARDLRAKATARDR
AAAEKVGRRQAAAAAAAATAATAAGGVVVGGGAAGGAASGYGAGVGVEFG
ADEDEEGAEEAPLYVGIKMPVRVPLAGDELKAFRDEENRKRRLELEEEEQ
RRHAAAMEKEQVIADSDEGSDKEDDHADPAPKRRRAIIASLFSKYSKPQH
LMFGYYDPQIPTDEYGVKENEPIGWLAEAMQRHNSEITTVAMQEAGAALQ
DAKRGGKKLKLQDGTSDRKRGEPSGGSGDDEAEGEGGGGGDGGEASPPPE
GQQEQPVDDLRAWAGEGKQSAFFQDSGAVPTKLEQEDQWLPVACRVVYVD
SEGLSDGRAIKMTVINLAPKMLIVSGGQPRAKAELVSFVRHQLEPAAKNR
KKRRRGRGDGVLGTAGRSGGGSGGGRDGDGEEEEEEEEEEEEEDACRFVV
VNKAMKSLPVALDSGAFDVLLHDSLHTQLKWKQLNNYGVAHMECRVDSRG
ETPLLCAKPRGDKVGHPAMFLSLGHVNITPLQQAFKDAGVAVKFVGGGTL
ECEGGAVTVSLGKGGKLEIEGPLSDEYFRVREVVYRQYAIV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022712Beta_Casp
IPR025069Cpsf2_C
IPR036866RibonucZ/Hydroxyglut_hydro
IPR001279Metallo-B-lactamas
IPR027075CPSF2