prot_L-elsbetiae_contig1444.3276.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1444.3276.1
Unique Nameprot_L-elsbetiae_contig1444.3276.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length131
Homology
BLAST of mRNA_L-elsbetiae_contig1444.3276.1 vs. uniprot
Match: D7G779_ECTSI (L51_S25_CI-B8 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G779_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 8.110e-85
Identity = 118/130 (90.77%), Postives = 124/130 (95.38%), Query Frame = 0
Query:    1 MATRGVFQLRKITVKYCDHSGSSKGAREFIRRRIVEFANNTPAAEVATELRPGQHPYIMGDYVTGEVKTIGIKNIPPGEIMDYALMLRNSSGRKVRKLKKPVESRYPSIQGVWDIDAPLHTIDMHVKHHD 130
            MATRGVFQLRK+T+KYCDHSGSSKGAREFIR RIVEFANNTPAAEV TELRPG+HPYIMGDYVTGEVKTIGIKNI PGEIMDYA+MLRNSSG KVRK KKPVESRYPSIQGVWDIDAPLHT D+HV+HHD
Sbjct:    1 MATRGVFQLRKLTLKYCDHSGSSKGAREFIRHRIVEFANNTPAAEVVTELRPGKHPYIMGDYVTGEVKTIGIKNIAPGEIMDYAMMLRNSSGHKVRKFKKPVESRYPSIQGVWDIDAPLHTTDIHVEHHD 130          
BLAST of mRNA_L-elsbetiae_contig1444.3276.1 vs. uniprot
Match: A0A835ZEX9_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEX9_9STRA)

HSP 1 Score: 134 bits (337), Expect = 4.560e-38
Identity = 62/128 (48.44%), Postives = 83/128 (64.84%), Query Frame = 0
Query:    1 MATRGVFQLRKITVKYCDHSGSSKGAREFIRRRIVEFANNTPAAEVATELRPGQHPYIMGDYVTGEVKTIGIKNIPPGEIMDYALMLRNSSGRKVRKLKKPVESRYPSIQGVWDIDAPLHTIDMHVKH 128
            MATRGV QL++I ++YCD  GSS+G R+FI R +V FA   P  E+ TE+R  +HP I  DY+TG  KT+G+KN  P  I D+   LR ++GRK R+  KPV SR PS+QG WD +     +   V+H
Sbjct:    1 MATRGVMQLQRIHIRYCDWGGSSQGMRDFIGRELVAFAKAVPHCEIITEVRRNRHPIIRADYLTGIPKTLGVKNEAPSAIRDFLHRLRTTTGRKQRRFDKPVVSRLPSVQGAWDPEVAYQAMRTTVRH 128          
BLAST of mRNA_L-elsbetiae_contig1444.3276.1 vs. uniprot
Match: A0A024G7B8_9STRA (L51_S25_CI-B8 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G7B8_9STRA)

HSP 1 Score: 123 bits (309), Expect = 7.900e-34
Identity = 55/117 (47.01%), Postives = 81/117 (69.23%), Query Frame = 0
Query:    1 MATRGVFQLRKITVKYCDHSGSSKGAREFI-RRRIVEFANNTPAAEVATELRPGQHPYIMGDYVTGEVKTIGIKNIPPGEIMDYALMLRNSSGRKVRKLKKPVESRYPSIQGVWDID 116
            MATRG++QL+++T++YC HSGSS+  R+F+  ++ +EF    P     TEL+PG+HP ++GDYVT + K   +KN     IM     LR+SSGRK+ K+K+PV ++ PSIQG+W  D
Sbjct:    1 MATRGIWQLKEVTIRYCQHSGSSRHVRDFLSNKQFLEFVKENPQVSFRTELKPGRHPVLIGDYVTNQQKVCDVKNKEQKVIMLQLQRLRDSSGRKMTKMKRPVITKCPSIQGIWQQD 117          
BLAST of mRNA_L-elsbetiae_contig1444.3276.1 vs. uniprot
Match: F0WUQ8_9STRA (Uncharacterized protein AlNc14C277G10065 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WUQ8_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.250e-33
Identity = 54/117 (46.15%), Postives = 81/117 (69.23%), Query Frame = 0
Query:    1 MATRGVFQLRKITVKYCDHSGSSKGAREFIR-RRIVEFANNTPAAEVATELRPGQHPYIMGDYVTGEVKTIGIKNIPPGEIMDYALMLRNSSGRKVRKLKKPVESRYPSIQGVWDID 116
            MATRG++QL+++T++YC HSGSS+  R+F+  ++ ++F    P     TEL+PG+HP ++GDYVT E K   +KN     IM     LR+SSGRK+ ++K+P+ S+ PSIQG+W  D
Sbjct:    1 MATRGIWQLKELTIRYCQHSGSSRYIRDFLNNKKFIDFVKENPQVAFRTELKPGRHPVLIGDYVTNEQKVCDVKNKEEKWIMLQLQRLRDSSGRKMTRMKRPIISKRPSIQGIWQQD 117          
BLAST of mRNA_L-elsbetiae_contig1444.3276.1 vs. uniprot
Match: A0A7S3V4V6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V4V6_9STRA)

HSP 1 Score: 119 bits (298), Expect = 5.710e-32
Identity = 58/114 (50.88%), Postives = 75/114 (65.79%), Query Frame = 0
Query:    1 MATRGVFQLRKITVKYCDHSGSSKGAREFIRRR-IVEFANNTPAAEVATELRPGQHPYIMGDYVTGEVKTIGIKNIPPGEIMDYALMLRNSSGRKVRKLKKPVESRYPSIQGVW 113
            MATRGV QL K+ V +C+H GSS   RE+I+   IV+FA + P  EV  +LR G+HPYI  +Y+TG  K + +KN P   I D   ML NSSGRK+ K+  PV +  PS+QGVW
Sbjct:   12 MATRGVKQLAKLRVVFCEHGGSSNLVREYIKTGGIVQFATDNPTVEVEAKLRNGKHPYIKAEYITGFSKQVCVKNEPLERIQDVMTMLNNSSGRKISKIGNPVRTDTPSVQGVW 125          
BLAST of mRNA_L-elsbetiae_contig1444.3276.1 vs. uniprot
Match: A9S2L6_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9S2L6_PHYPA)

HSP 1 Score: 117 bits (293), Expect = 1.620e-31
Identity = 58/113 (51.33%), Postives = 74/113 (65.49%), Query Frame = 0
Query:    1 MATRGVFQLRKITVKYCDHSGSSKGAREFIRRRIVEFANNTPAAEVATELRPGQHPYIMGDYVTGEVKTIGIKNIPPGEIMDYALMLRNSSGRKVRKLKKPVESRYPSIQGVW 113
            MA RGV+QL+K+ V +CDHSGSS GAREF+ R       N P  EVAT+L PGQHPY+ G Y+    + + +KN    EI+  A+ LRNS+GRKV KLK    +  PS+QG W
Sbjct:    1 MAVRGVWQLQKLIVCFCDHSGSSAGAREFVARIFPTLQKNNPQFEVATQLVPGQHPYLRGLYLNKNDRVVDVKNKNAEEILTQAMRLRNSTGRKVVKLKTRHVTFNPSVQGSW 113          
BLAST of mRNA_L-elsbetiae_contig1444.3276.1 vs. uniprot
Match: H3GM96_PHYRM (L51_S25_CI-B8 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GM96_PHYRM)

HSP 1 Score: 115 bits (289), Expect = 8.800e-31
Identity = 56/121 (46.28%), Postives = 80/121 (66.12%), Query Frame = 0
Query:    1 MATRGVFQLRKITVKYCDHSGSSKGAREFIR-RRIVEFANNTPAAEVATELRPGQHPYIMGDYVTGEVKTIGIKNIPPGEIMDYALMLRNSSGRKVRKLKKPVESRYPSIQGVW--DIDAP 118
            MAT+GV+QL+++T++YC H GSS+  R+ +   R ++F    P  +  TEL+  +HP ++GDYVT E K   IKN     I+D    LRNSSGRK+  +KKPV S+ P+IQG+W  D+D P
Sbjct:    1 MATKGVWQLKQVTIRYCQHGGSSRHVRQLLGDERFLKFVEANPQVQFETELKGARHPVLIGDYVTNERKVSDIKNQDIPFILDQLERLRNSSGRKMTHIKKPVISKRPTIQGIWQPDLDFP 121          
BLAST of mRNA_L-elsbetiae_contig1444.3276.1 vs. uniprot
Match: A0A7S1GKP3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GKP3_CYCTE)

HSP 1 Score: 115 bits (287), Expect = 2.040e-30
Identity = 55/114 (48.25%), Postives = 78/114 (68.42%), Query Frame = 0
Query:    1 MATRGVFQLRKITVKYCDHSGSSKGAREFIRR-RIVEFANNTPAAEVATELRPGQHPYIMGDYVTGEVKTIGIKNIPPGEIMDYALMLRNSSGRKVRKLKKPVESRYPSIQGVW 113
            MATRGV+QL ++ + YC+H GSS+  R++I   RIV++A + P  EV   +R G+HP I G+Y+TG+ K I +KN     I     ML NSSGRK++KLK+ V ++ PS+QGVW
Sbjct:    1 MATRGVYQLARLRLVYCEHGGSSRTIRDYISSGRIVQWAKDHPHVEVEVHVRNGKHPLIEGEYLTGQPKQITVKNQTMERIQQVVDMLHNSSGRKIKKLKRTVVTQTPSVQGVW 114          
BLAST of mRNA_L-elsbetiae_contig1444.3276.1 vs. uniprot
Match: A0A6P3YX15_ZIZJJ (54S ribosomal protein L51, mitochondrial n=2 Tax=Rosales TaxID=3744 RepID=A0A6P3YX15_ZIZJJ)

HSP 1 Score: 114 bits (285), Expect = 2.660e-30
Identity = 55/117 (47.01%), Postives = 71/117 (60.68%), Query Frame = 0
Query:    1 MATRGVFQLRKITVKYCDHSGSSKGAREFIRRRIVEFANNTPAAEVATELRPGQHPYIMGDYVTGEVKTIGIKNIPPGEIMDYALMLRNSSGRKVRKLKKPVESRYPSIQGVWDIDA 117
            MA RGV+QL+K+ V YCD  GSS+G R F+   +  F    P  EV TEL  GQHP++ G Y     + I +KN+ P EI  YA  LRNS GRKV KL+    +++PS+QG W  D 
Sbjct:    1 MALRGVWQLQKLIVNYCDWGGSSRGIRAFMESHLPAFKEKNPQLEVVTELIRGQHPHLKGLYGNKNQRVICVKNMDPDEIFQYATRLRNSLGRKVVKLRTRHVTKHPSVQGTWTTDV 117          
BLAST of mRNA_L-elsbetiae_contig1444.3276.1 vs. uniprot
Match: A0A7S2W7Q4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W7Q4_9STRA)

HSP 1 Score: 115 bits (288), Expect = 3.110e-30
Identity = 59/114 (51.75%), Postives = 71/114 (62.28%), Query Frame = 0
Query:    1 MATRGVFQLRKITVKYCDHSGSSKGAREFIRR-RIVEFANNTPAAEVATELRPGQHPYIMGDYVTGEVKTIGIKNIPPGEIMDYALMLRNSSGRKVRKLKKPVESRYPSIQGVW 113
            MATRGV QL+K+ + YC+H GSS   REFI   +IV FA   P+  V  +LR G HPYI G Y+TG  K I IKN     I+    ML N+SGRK+ KL K   +  PSIQGVW
Sbjct:   31 MATRGVKQLQKLRIVYCEHGGSSASIREFISSGKIVSFAEKNPSVTVIAQLRNGNHPYIKGQYLTGNSKQICIKNETVPRIVKVVHMLNNTSGRKITKLGKSTRTATPSIQGVW 144          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1444.3276.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G779_ECTSI8.110e-8590.77L51_S25_CI-B8 domain-containing protein n=2 Tax=Ec... [more]
A0A835ZEX9_9STRA4.560e-3848.44Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A024G7B8_9STRA7.900e-3447.01L51_S25_CI-B8 domain-containing protein n=1 Tax=Al... [more]
F0WUQ8_9STRA2.250e-3346.15Uncharacterized protein AlNc14C277G10065 n=1 Tax=A... [more]
A0A7S3V4V6_9STRA5.710e-3250.88Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A9S2L6_PHYPA1.620e-3151.33Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
H3GM96_PHYRM8.800e-3146.28L51_S25_CI-B8 domain-containing protein n=1 Tax=Ph... [more]
A0A7S1GKP3_CYCTE2.040e-3048.25Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A6P3YX15_ZIZJJ2.660e-3047.0154S ribosomal protein L51, mitochondrial n=2 Tax=R... [more]
A0A7S2W7Q4_9STRA3.110e-3051.75Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007741Ribosomal protein/NADH dehydrogenase domainSMARTSM00916L51_S25_CI_B8_2coord: 18..91
e-value: 1.2E-11
score: 54.7
IPR007741Ribosomal protein/NADH dehydrogenase domainPFAMPF05047L51_S25_CI-B8coord: 26..74
e-value: 2.7E-6
score: 27.2
NoneNo IPR availableGENE3D3.40.30.10coord: 2..128
e-value: 8.7E-38
score: 131.4
IPR03992739S ribosomal protein L43/54S ribosomal protein L51PANTHERPTHR2139639S RIBOSOMAL PROTEIN L43coord: 1..115
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 8..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1444contigL-elsbetiae_contig1444:14259..16591 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1444.3276.1mRNA_L-elsbetiae_contig1444.3276.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1444 13281..16591 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1444.3276.1 ID=prot_L-elsbetiae_contig1444.3276.1|Name=mRNA_L-elsbetiae_contig1444.3276.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=131bp
MATRGVFQLRKITVKYCDHSGSSKGAREFIRRRIVEFANNTPAAEVATEL
RPGQHPYIMGDYVTGEVKTIGIKNIPPGEIMDYALMLRNSSGRKVRKLKK
PVESRYPSIQGVWDIDAPLHTIDMHVKHHD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007741Ribosome/NADH_DH
IPR039927MRPL43/MRPL51
IPR036249Thioredoxin-like_sf