prot_L-elsbetiae_contig14388.3236.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14388.3236.1
Unique Nameprot_L-elsbetiae_contig14388.3236.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length52
Homology
BLAST of mRNA_L-elsbetiae_contig14388.3236.1 vs. uniprot
Match: D8LAX7_ECTSI (Cell wall surface anchor family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX7_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 4.700e-20
Identity = 37/40 (92.50%), Postives = 38/40 (95.00%), Query Frame = 0
Query:    2 AWVRLLERAPWSGRDGHAALAHNGAIFLMGGTQDPRSNFS 41
            AWVRLLE APWSGRDGHAAL HNGAIFLMGGTQDPR+NFS
Sbjct:   66 AWVRLLEHAPWSGRDGHAALTHNGAIFLMGGTQDPRNNFS 105          
BLAST of mRNA_L-elsbetiae_contig14388.3236.1 vs. uniprot
Match: A0A6H5JNX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNX3_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 1.130e-16
Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 0
Query:    2 AWVRLLERAPWSGRDGHAALAHNGAIFLMGGTQDPRSN 39
            AWVRLLE APWSGRDGHAAL HNGAIFLMGGTQDPR+N
Sbjct:   66 AWVRLLEHAPWSGRDGHAALTHNGAIFLMGGTQDPRNN 103          
BLAST of mRNA_L-elsbetiae_contig14388.3236.1 vs. uniprot
Match: A0A835YGT5_9STRA (Cell wall surface anchor family protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGT5_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 6.230e-11
Identity = 25/37 (67.57%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    3 WVRLLERAPWSGRDGHAALAHNGAIFLMGGTQDPRSN 39
            W ++  RAPWSGRDGH AL H G+I++MGGTQD RSN
Sbjct:   57 WSQITPRAPWSGRDGHVALEHLGSIYIMGGTQDLRSN 93          
BLAST of mRNA_L-elsbetiae_contig14388.3236.1 vs. uniprot
Match: A0A5S9NUV9_9GAMM (N-acetylneuraminate epimerase n=1 Tax=BD1-7 clade bacterium TaxID=2029982 RepID=A0A5S9NUV9_9GAMM)

HSP 1 Score: 48.5 bits (114), Expect = 3.930e-5
Identity = 21/53 (39.62%), Postives = 31/53 (58.49%), Query Frame = 0
Query:    1 QAWVRLL-ERAPWSGRDGHAALAHNGAIFLMGGTQDPRSNFSDVWRSANGRDW 52
            + W ++  E   W  R   +A +H G I+LMGG  D R+ F D+WRS +G+ W
Sbjct:  278 KTWQQITTEGRQWLARKALSAASHLGYIYLMGGENDARNAFDDLWRSIDGKKW 330          
BLAST of mRNA_L-elsbetiae_contig14388.3236.1 vs. uniprot
Match: A0A5S9P204_9GAMM (N-acetylneuraminate epimerase n=1 Tax=BD1-7 clade bacterium TaxID=2029982 RepID=A0A5S9P204_9GAMM)

HSP 1 Score: 48.1 bits (113), Expect = 5.380e-5
Identity = 21/53 (39.62%), Postives = 31/53 (58.49%), Query Frame = 0
Query:    1 QAWVRLL-ERAPWSGRDGHAALAHNGAIFLMGGTQDPRSNFSDVWRSANGRDW 52
            + W ++  E   W  R   +A +H G I+LMGG  D R+ F D+WRS +G+ W
Sbjct:  278 KTWQQVTTEGRQWLARKALSAASHLGYIYLMGGENDARNAFDDLWRSIDGKKW 330          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14388.3236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LAX7_ECTSI4.700e-2092.50Cell wall surface anchor family protein n=1 Tax=Ec... [more]
A0A6H5JNX3_9PHAE1.130e-1692.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YGT5_9STRA6.230e-1167.57Cell wall surface anchor family protein (Fragment)... [more]
A0A5S9NUV9_9GAMM3.930e-539.62N-acetylneuraminate epimerase n=1 Tax=BD1-7 clade ... [more]
A0A5S9P204_9GAMM5.380e-539.62N-acetylneuraminate epimerase n=1 Tax=BD1-7 clade ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 3..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14388contigL-elsbetiae_contig14388:3626..3781 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14388.3236.1mRNA_L-elsbetiae_contig14388.3236.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14388 3626..3781 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14388.3236.1 ID=prot_L-elsbetiae_contig14388.3236.1|Name=mRNA_L-elsbetiae_contig14388.3236.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=52bp
QAWVRLLERAPWSGRDGHAALAHNGAIFLMGGTQDPRSNFSDVWRSANGR
DW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller