prot_L-elsbetiae_contig14377.3231.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14377.3231.1
Unique Nameprot_L-elsbetiae_contig14377.3231.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length409
Homology
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BLAST of mRNA_L-elsbetiae_contig14377.3231.1 vs. uniprot
Match: A0A6H5JNJ8_9PHAE (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNJ8_9PHAE)

HSP 1 Score: 546 bits (1408), Expect = 4.060e-192
Identity = 289/412 (70.15%), Postives = 333/412 (80.83%), Query Frame = 0 
Query:    1 MAADATSD-KVWQELRKLRDDIPPPLDSNDPG-----QDSFFYKNYAAFAACNEVRAAIGRCSELPRDEFLDFFTRLVAGPRLEELFDLFKASRNPQHPALQYACLLALHGVAELSDRRKDLLTRPDVVRELCAVMASPRQRMITPKSAGAGGSEVVNTAAGAVTTITGLFTSNGTLEPAFAKVWVDLGAVSALAACLESHAAFDRANPVSTDLPLCFFLVATSLLAGAAGAVSKQDKIRLGTAWLTVFVEATRWVAHEAADLLADFFTRPAWLMGVVAKIPEGLRARAVEAARVCERAGASGGGSGVCSSWKRGRADRLALALLCGCPAVWDEGRKLVGRRCAGPGCEHVQRCGDGAEVIGVDASVGAGVAEETGSAVPFKRCSQCRAVAYCSRECQAAHWKKGHKKACAA 406
            M AD+TS  K+WQELRKLRDDIPPP+D+N        + S  YK++AAFAACNEVR AIGR S LPRD+FL  F +LVAGPRL+EL +LFK SR+P HPALQYACL+ALHGVAELSDRRKDLLTRPDVV+ELCAVMASPRQR++TP SAGAGG E+VN AAGAVTTITGLFTSNG LEP +AK+WV+LGAVSALA+CLE+HA FDR+NPVS DLPLCFFL+ATSLLAGAA +VS++DK+RLG AWLTVF+EATRW+A EAADLLADF+TRP WL  +V ++PE LRA AV AAR CER G +G GS   S WK G+ADRLALALLCG    WD G +LVGRRCAGP C+ VQ+CG G       AS   G   +  ++V FKRCSQC AV YCSRECQ A WKK H+KAC+A
Sbjct:    1 MTADSTSSSKIWQELRKLRDDIPPPVDNNTGSNKGDQESSTCYKDFAAFAACNEVRVAIGRSSALPRDQFLAIFRQLVAGPRLDELLELFKFSRSPPHPALQYACLVALHGVAELSDRRKDLLTRPDVVKELCAVMASPRQRLVTPTSAGAGGVEIVNAAAGAVTTITGLFTSNGPLEPPYAKLWVELGAVSALASCLENHAVFDRSNPVSGDLPLCFFLIATSLLAGAADSVSEEDKLRLGKAWLTVFLEATRWIADEAADLLADFYTRPNWLKNIVERMPEKLRASAVAAARECEREG-TGSGS---SPWKGGKADRLALALLCGNAYNWDAGGELVGRRCAGPRCDRVQKCGHGGGNPHPAASEDEG--GDGAASVAFKRCSQCHAVGYCSRECQKAGWKK-HRKACSA 405
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BLAST of mRNA_L-elsbetiae_contig14377.3231.1 vs. uniprot
Match: E1ZA90_CHLVA (MYND-type domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZA90_CHLVA)

HSP 1 Score: 58.5 bits (140), Expect = 6.570e-6
Identity = 24/36 (66.67%), Postives = 29/36 (80.56%), Query Frame = 0 
Query:  372 AVPFKRCSQCRAVAYCSRECQAAHWKKGHKKACAAA 407
            A   K+CS+CRAVAYC RECQ AHW++GHK+ CA A
Sbjct:  265 AAELKKCSRCRAVAYCCRECQMAHWRRGHKRECAPA 300
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BLAST of mRNA_L-elsbetiae_contig14377.3231.1 vs. uniprot
Match: A0A7S4FNL6_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FNL6_9EUGL)

HSP 1 Score: 54.3 bits (129), Expect = 4.310e-5
Identity = 23/37 (62.16%), Postives = 29/37 (78.38%), Query Frame = 0 
Query:  368 ETGSAVPFKRCSQCRAVAYCSRECQAAHWKKGHKKAC 404
            ETG    +K+C++CRAV+YCS+ECQ AHWK GHK  C
Sbjct:  135 ETGG--KYKQCARCRAVSYCSKECQRAHWKAGHKAEC 169
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BLAST of mRNA_L-elsbetiae_contig14377.3231.1 vs. uniprot
Match: A0A7S3ZTC2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTC2_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 8.820e-5
Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 0 
Query:  373 VPFKRCSQCRAVAYCSRECQAAHWKKGHKKAC 404
            VP K C+ C  VAYCSR+CQA+HWKKGH+K C
Sbjct:  466 VPVKACTGCHRVAYCSRKCQASHWKKGHRKLC 497
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14377.3231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JNJ8_9PHAE4.060e-19270.15MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
E1ZA90_CHLVA6.570e-666.67MYND-type domain-containing protein n=1 Tax=Chlore... [more]
A0A7S4FNL6_9EUGL4.310e-562.16Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S3ZTC2_9STRA8.820e-568.75Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 375..404
e-value: 4.5E-11
score: 42.7
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 345..404
score: 11.136
NoneNo IPR availableGENE3D3.30.60.180coord: 359..408
e-value: 4.0E-12
score: 47.7
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 374..406

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14377contigL-elsbetiae_contig14377:888..2298 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14377.3231.1mRNA_L-elsbetiae_contig14377.3231.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14377 888..2298 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14377.3231.1 ID=prot_L-elsbetiae_contig14377.3231.1|Name=mRNA_L-elsbetiae_contig14377.3231.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=409bp
MAADATSDKVWQELRKLRDDIPPPLDSNDPGQDSFFYKNYAAFAACNEVR
AAIGRCSELPRDEFLDFFTRLVAGPRLEELFDLFKASRNPQHPALQYACL
LALHGVAELSDRRKDLLTRPDVVRELCAVMASPRQRMITPKSAGAGGSEV
VNTAAGAVTTITGLFTSNGTLEPAFAKVWVDLGAVSALAACLESHAAFDR
ANPVSTDLPLCFFLVATSLLAGAAGAVSKQDKIRLGTAWLTVFVEATRWV
AHEAADLLADFFTRPAWLMGVVAKIPEGLRARAVEAARVCERAGASGGGS
GVCSSWKRGRADRLALALLCGCPAVWDEGRKLVGRRCAGPGCEHVQRCGD
GAEVIGVDASVGAGVAEETGSAVPFKRCSQCRAVAYCSRECQAAHWKKGH
KKACAAAH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND