prot_L-elsbetiae_contig1437.3225.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1437.3225.1
Unique Nameprot_L-elsbetiae_contig1437.3225.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length453
Homology
BLAST of mRNA_L-elsbetiae_contig1437.3225.1 vs. uniprot
Match: A0A6H5JMH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH8_9PHAE)

HSP 1 Score: 528 bits (1361), Expect = 8.960e-184
Identity = 311/418 (74.40%), Postives = 337/418 (80.62%), Query Frame = 0
Query:   40 VSAFGFGGGLSQQ-SVSRSLRWAGASVRSKVSIPRPGAARIRSRAPSPPSDGETLSATSRRRSAFVVEGR-VGPAAASTTQDWRDLSIEEETALCEQIMENRRVQELQVELERKQSRPVTVHEWAVAAGHPSAHQLMDALQEGRKAQRTMVLCHQGLVRSVALRYNQVSRSLSSDDLTQEGNVGLLQAVEKFDPTRGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDTAMRILAASHALRLESAGGXXXXXXXXTDAQLALALSIPEASVTLYRKSALRQSVADLDNPALSGTPESXXXXXXXXXXXXXXXXERWPWEASRLAQAHVVRRDMMRAMQACLSPTEERALRLRFGLGG---EGAAGEAGAALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLAYADLI 452
            V AFG+ G LSQQ S SRSLR AG     +  I RP       R PS P+  + L AT+RRR+AFVVEG    P  +S+T DWRDL+ EEETALCE I+ENRR+Q+LQVELERK+SRPVTV EWAVAAGHPSAHQLM ALQEGRKAQRT+ LCHQGLVRSVA RY QVSR+LS DDLTQEGNVGLLQAVEKFDPT+GTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQD AMRILAASHAL+LES G         TDAQLA+AL +PEASV LYRKS L Q++ADLDN ALSG+P+                 E+WPWEAS+LAQA+VVRRDMMRAMQACLSPTEERALRLRFGLGG   EGAAG  G ALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLAYADLI
Sbjct:   40 VCAFGYVGVLSQQQSSSRSLRPAGGG---RGGIRRP-------RVPSSPAQEKALFATARRRNAFVVEGGGANPVTSSSTADWRDLTKEEETALCELIVENRRIQDLQVELERKESRPVTVQEWAVAAGHPSAHQLMAALQEGRKAQRTLALCHQGLVRSVAYRYKQVSRNLSLDDLTQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDAAMRILAASHALQLESGGDVP------TDAQLAVALGMPEASVALYRKSLLPQNIADLDNSALSGSPQGRAAGGGSRGGRVGG--EQWPWEASQLAQAYVVRRDMMRAMQACLSPTEERALRLRFGLGGAEKEGAAGGGGGALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLAYADLI 439          
BLAST of mRNA_L-elsbetiae_contig1437.3225.1 vs. uniprot
Match: D7FPW8_ECTSI (RpoD n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPW8_ECTSI)

HSP 1 Score: 491 bits (1265), Expect = 4.310e-170
Identity = 271/351 (77.21%), Postives = 293/351 (83.48%), Query Frame = 0
Query:  107 GRVGPAAASTTQDWRDLSIEEETALCEQIMENRRVQELQVELERKQSRPVTVHEWAVAAGHPSAHQLMDALQEGRKAQRTMVLCHQGLVRSVALRYNQVSRSLSSDDLTQEGNVGLLQAVEKFDPTRGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDTAMRILAASHALRLESAGGXXXXXXXXTDAQLALALSIPEASVTLYRKSALRQSVADLDNPALSGTPESXXXXXXXXXXXXXXXX--ERWPWEASRLAQAHVVRRDMMRAMQACLSPTEERALRLRFGLGG---EGAAGEAGAALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLAYADLI 452
            G   P  +S+T DWRDL+ EEETALCE I+ENRR+Q+LQVELERK+SRPVTV EWAVAAGHPSAHQLM ALQEGRKAQRT+ LCHQGLVRSVA RY QVSR+LS DDLTQEGNVGLL+AVEKFD T+GTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQD AMRILAASHAL+LES G         TDAQLA+AL +PEASV LYRKS L Q++ADLDNPAL  +P+                   E+WPWEAS+LAQAHVVRRDMMRAMQACLSPTEERALRLRFGLGG   EGA  + G ALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLL+YADLI
Sbjct:   37 GGANPVTSSSTTDWRDLTKEEETALCELIIENRRIQDLQVELERKESRPVTVQEWAVAAGHPSAHQLMAALQEGRKAQRTLALCHQGLVRSVAYRYKQVSRNLSLDDLTQEGNVGLLEAVEKFDSTKGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDAAMRILAASHALQLESGGDVP------TDAQLAVALGMPEASVALYRKSLLPQNIADLDNPALPSSPQGRGGSGAAGGGSLGGRVGGEQWPWEASQLAQAHVVRRDMMRAMQACLSPTEERALRLRFGLGGAEKEGAVADGGGALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLSYADLI 381          
BLAST of mRNA_L-elsbetiae_contig1437.3225.1 vs. uniprot
Match: A0A835ZDU2_9STRA (RNA_pol_sigma70 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDU2_9STRA)

HSP 1 Score: 184 bits (468), Expect = 8.310e-51
Identity = 129/334 (38.62%), Postives = 194/334 (58.08%), Query Frame = 0
Query:  122 DLSIEEETALCEQIMENRRVQELQVELERKQSRPVTVHEWAVAAGHPSAHQLMDALQEGRKAQRTMVLCHQGLVRSVALRYNQVSRSLSSDDLTQEGNVGLLQAVEKFDPTRGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDTAMRILAASHALRLESAGGXXXXXXXXTDAQLALALSIPEASVTLYRKSALRQSV-----ADLDNPALSGTPESXXXXXXXXXXXXXXXXERWPWEASRLAQAHVVRRDMMRAMQACLSPTEERALRLRFGLGGEGAAGEAGAALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLAYAD 450
            +L  + E AL   I E+ R+   Q +LE    R   V EWA AAG+  +  ++ AL+EG+KAQ  +V   + +VR++A +Y  +++SL+ DDL QEGN+GLL A +KFDP +G RF +YA FR+KASVLRAIA+KDR +R+PVH QD A ++ +A+  L++             TDA++A  L +  + VT +R+   +++V     +D D  A +                           A+  A++ +V  D+ R ++  L+P E  AL+LRFGL G+ AAG     LTFKE+G +M+ SAEGIR++V R++ KL+   EA  LL  YA+
Sbjct:   46 ELDPDVENALYAAIREHSRIHAKQEQLECILGRSALVAEWASAAGYMDSMSMLAALREGQKAQTKLVKSQRAMVRAIAKKYAFITKSLTLDDLIQEGNLGLLSAADKFDPDKGARFGTYAAFRVKASVLRAIANKDRQIRIPVHIQDVAGKVRSATQRLQVT-------LGRPPTDAEIAATLDMLPSEVTAHREMMDKEAVTVNAVSDRDVMAFAA-------------------------RATPQARSEMVE-DLKRVLELYLAPKEIEALQLRFGLDGQ-AAGP----LTFKEVGGSMQTSAEGIRRIVSRALDKLREG-EAWRLLSDYAE 340          
BLAST of mRNA_L-elsbetiae_contig1437.3225.1 vs. uniprot
Match: A0A835ZES3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES3_9STRA)

HSP 1 Score: 124 bits (311), Expect = 7.200e-28
Identity = 105/311 (33.76%), Postives = 157/311 (50.48%), Query Frame = 0
Query:  142 QELQVELERKQSRPVTVHEWAVAAGHPSAHQLMDALQEGRKAQRTMVLCHQGLVRSVALRYNQVSRSLSSDDLTQEGNVGLLQAVEKFDPTRGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDTAMRILAASHALRLESAGGXXXXXXXXTDAQLALALSIPEASVTLYRKSALRQSVADLD---NPALSGTPESXXXXXXXXXXXXXXXXERWPWEASRLAQAHVVRRDMMRAMQACLSPTEERALRLRFGLGGEGAAGEAGAALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLAYA 449
            +EL V LER+ SR     EWA   G       +  ++  R A+ TM+  +  L  S+A RY    R L+  DL QEG+ GL++A E+FDP +G +FS+YA + IK S++RAIAD+ R +R+PVH  D    I  A+  L LE            TD +L+L L +P   +  YR++A  +SV  ++   N A  G+  S                E  P    R  Q+ +  ++ M  +   LSP E+  +RLRFGL       + G A T +EIG+   ++ E +R++  R++ KL+     N  L AYA
Sbjct:   94 EELAVRLERQPSRA----EWAAHMGVDEDTLKLIMIRSSR-AKTTMISANLRLAVSIAKRYKH--RGLALSDLVQEGSFGLMKAAERFDPDKGFKFSTYATWWIKQSIMRAIADQSRTIRLPVHVHDLLNSIKRATRELSLE-------LGRTPTDEELSLRLQVPTQKIEFYREAA--RSVLSMEQSLNNARKGSAASLGGKSDMTLEDSLRDPE--PLPEDRTQQSML--KENMSQLLGTLSPREQEVVRLRFGL-------DDGRARTLEEIGQVFCVTRERVRQIESRALQKLR-QPYRNHKLRAYA 376          
BLAST of mRNA_L-elsbetiae_contig1437.3225.1 vs. uniprot
Match: A0A835ZBY3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBY3_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.010e-26
Identity = 101/327 (30.89%), Postives = 157/327 (48.01%), Query Frame = 0
Query:  123 LSIEEETALCEQIMENRRVQELQVELERKQSRPVTVHEWAVAAGHPSAHQLMDALQEGRKAQRTMVLCHQGLVRSVALRYNQVSRSLSSDDLTQEGNVGLLQAVEKFDPTRGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDTAMRILAASHALRLESAGGXXXXXXXXTDAQLALALSIPEASVTLYRKSALRQSVADLDNPALSGTPESXXXXXXXXXXXXXXXXERWPWEASRLAQAHVVRRDMMRAMQACLSPTEERALRLRFGLGGEGAAGEAGAALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLAYA 449
            L  EEE AL  QI      +  + EL  +  R  ++ EWA   G       +  ++  R A+ TM+  +  L  S+A RY +  R L+  DL QEG+ GL++A E+FDP +G +FS+YA + IK S++RAIAD+ R +R+PVH  D    +  A+  L LE            TD +LA+ L +    +  YR +A  QSV  ++      + +                  R P         H + ++ +  +   LSP E+  +RLRFGL       + G A T +EIG+   ++ E +R++  R++ KL+     N  L AYA
Sbjct:   30 LKPEEEIALARQIKLGIEWEAAREELAMRLERTPSLGEWAAHMGVDEDTLKLIMIRSAR-AKSTMISANLRLAVSIAKRYRR--RGLALPDLIQEGSFGLMKAAERFDPEKGFKFSTYATWWIKQSIMRAIADQSRTIRLPVHVHDFLNSVKRATRELSLE-------LGRHPTDEELAMRLQVTAQKIVFYRDAA--QSVLSMEQSRNFASRKGSGASQGGKSDMTLEDSLRDPEPLPEDRTQHAMLKENLLQLLGTLSPREQEVVRLRFGL-------DDGRARTLEEIGQVFCVTRERVRQIESRALQKLR-QPYRNHKLRAYA 336          
BLAST of mRNA_L-elsbetiae_contig1437.3225.1 vs. uniprot
Match: UPI0008F9CA57 (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Geitlerinema sp. PCC 9228 TaxID=111611 RepID=UPI0008F9CA57)

HSP 1 Score: 118 bits (295), Expect = 3.070e-26
Identity = 106/330 (32.12%), Postives = 158/330 (47.88%), Query Frame = 0
Query:  123 LSIEEETALCEQIMENRRVQELQVELERKQSRPVTVHEWAVAAGHPSAHQLMDALQEGRKAQRTMVLCHQGLVRSVALRYNQVSRSLSSDDLTQEGNVGLLQAVEKFDPTRGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDTAMRILAASHALRLESAGGXXXXXXXXTDAQLALALSIPEASVTLYRKSA-----LRQSVADLDNPALSGTPESXXXXXXXXXXXXXXXXERWPWEASRLAQAHVVRRDMMRAMQACLSPTEERALRLRFGLGGEGAAGEAGAALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLA 447
            L+ EEE    +Q+ +  ++QE++ EL   Q R  T+ EWA AA   S  QL   L  G  A+R MV  +  LV SVA +Y  + R++   DL QEG +G+ + VEKFDPT+G RFS+YA + I+ ++ RAIA+K R +R+P+H  +   +I  A   L  ++ G         T A+LA  L +    +  Y + A     L Q V D  +  L    E                           A    ++ D+   MQ  L+P ++  L LRFGL       E G ALT  +IG  + +S E +R++   ++ KL+      G  LA
Sbjct:   24 LTHEEEIYYGKQVQKFNQLQEVKKELTESQGREPTMSEWAAAADL-SVEQLQKQLARGEHAKRKMVEANLRLVVSVAKKY--IKRNVDLMDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKAQRNLS-QNLG------RAATVAELAEELDLSPKQIREYLERARQPLSLEQRVGDNQDTELGDLLEDTGP------------------SPEDFATQSSLKADLTELMQD-LTPQQKEVLALRFGL-------EDGKALTLSKIGDRLNISRERVRQIEREALTKLRKRKAQMGEYLA 317          
BLAST of mRNA_L-elsbetiae_contig1437.3225.1 vs. uniprot
Match: A0A5J4Z7E3_PORPP (RNA polymerase sigma factor SigA n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7E3_PORPP)

HSP 1 Score: 119 bits (298), Expect = 1.720e-25
Identity = 105/354 (29.66%), Postives = 170/354 (48.02%), Query Frame = 0
Query:   96 TSRRRSAFVVEG-------RVGPAAASTTQDWRDLSIEE------ETALCEQIMENRRVQELQVELERKQSRPVTVHEWAVAAGHPSAHQLMDALQEGRKAQRTMVLCHQGLVRSVALRYNQVSRSLSSDDLTQEGNVGLLQAVEKFDPTRGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDTAMRILAASHALRLESAGGXXXXXXXXTDAQLALALSIPEASVTLYRKSALRQSVADLDNPALSGTPESXXXXXXXXXXXXXXXXERWPWEASRLAQAHVVRRDMMRAMQACLSPTEERALRLRFGLGGEGAAGEAGAALTFKEIGRTMELSAEGIRKMVFRSIAKLQ 436
            T RRRS     G        VGPAA +  Q    +S ++      E AL  Q+     +Q+++ +  RK  RPV ++EWA   G  +A  L  A+Q G +A+  +V  + GLV +VA +Y     +L+  DL QEG +GL++A EKFD  +G RFS+YA + I+AS++R +  ++R +RVP    D    +      + L             T+ +LA  L +    +    +S +R+  +   N A SG+ +                 E             +++ D+ R ++  L+P E   +RLRFGL       E G   T +E+G+ ++LS E IR++VF ++ KL+
Sbjct:  176 TDRRRSGGGASGGHLRRNSSVGPAATAMRQYLAGISQDDLLERAQEIALANQVRALVDLQKVRSDAARKLGRPVPLNEWAEMVGM-TAQDLTLAMQLGTRAKNQLVTSNMGLVHNVAGKYAGKVETLTFQDLVQEGAMGLMRAAEKFDAKKGWRFSTYATWWIRASMMRCMDHQERSIRVPGPVLDQFRLVKKTFTVMSLRKG-------REPTNEELAKELKLSTDKLRFILQSGVRKPSSVDQNVARSGSNDDAHKTLLDILRSDENVEEN--------IVGEMLKGDLDRVLRRYLNPQERGVVRLRFGL-------EDGHTRTLEEVGKALKLSRERIRQVVFTAMRKLR 506          
BLAST of mRNA_L-elsbetiae_contig1437.3225.1 vs. uniprot
Match: A0A6H5K3H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H4_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 1.050e-24
Identity = 92/280 (32.86%), Postives = 140/280 (50.00%), Query Frame = 0
Query:  157 TVHEWAVAAGHPSAHQLMDALQEGRKAQRTMVLCHQGLVRSVALRYNQVSRSLSSDDLTQEGNVGLLQAVEKFDPTRGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDTAMRILAASHALRLESAGGXXXXXXXXTDAQLALALSIPEASVTLYRKSALRQSVADLDNPALSGTPESXXXXXXXXXXXXXXXXERWPWEASRLAQAHVVRRDMMRAMQACLSPTEERALRLRFGLGGEGAAGEAGAALTFKEIGRTMELSAEGIRKMVFRSIAKLQ 436
            T  EWAVA G     +L+  L    KA+  M+  +  LV SVA RY    + LS  DL QEG  GL++A EKFDP RG +FS+YA + IK S++R IAD+ R++R+PVH  D   R+  A+  L +    G        TD +LA  L +    +  YR +A  Q+   ++ P    +  S                E+ P    + AQ+ V+++ +   +   LS  E+  ++ RFGLGG           T +E+GR   L+ E +R++  R++ KL+
Sbjct:  228 TEEEWAVALGM-DREELVKELSRASKAKMAMLAANLRLVVSVAKRYR--FQKLSFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSRIIRLPVHVHDFLNRVRKAT--LEMTDKNGKLP-----TDEELAEHLEVSAVRIQYYRDAA--QATLSMEAPRTIASKTSTSPGKKVEMGQGVSGPEKTP---DKQAQSDVMKQKVTELLMT-LSIREQEVVKARFGLGGA-------LPRTLEEVGRDFRLTRERVRQIEARALHKLR 484          
BLAST of mRNA_L-elsbetiae_contig1437.3225.1 vs. uniprot
Match: D8LNI6_ECTSI (Chloroplast RNA-polymerase sigma factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI6_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 5.350e-24
Identity = 91/277 (32.85%), Postives = 139/277 (50.18%), Query Frame = 0
Query:  160 EWAVAAGHPSAHQLMDALQEGRKAQRTMVLCHQGLVRSVALRYNQVSRSLSSDDLTQEGNVGLLQAVEKFDPTRGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDTAMRILAASHALRLESAGGXXXXXXXXTDAQLALALSIPEASVTLYRKSALRQSVADLDNPALSGTPESXXXXXXXXXXXXXXXXERWPWEASRLAQAHVVRRDMMRAMQACLSPTEERALRLRFGLGGEGAAGEAGAALTFKEIGRTMELSAEGIRKMVFRSIAKLQ 436
            EWAVA G     +L+  L    KA+  M+  +  LV SVA RY    + LS  DL QEG  GL++A EKFDP RG +FS+YA + IK S++R IAD+ R++R+PVH  D   R+  A+  L +    G        TD +LA  L +    +  YR +A  Q+   ++ P    +  S                E+ P    + AQ+ V+++ +   +   LS  E+  ++ RFGLGG           T +E+GR   L+ E +R++  R++ KL+
Sbjct:  101 EWAVALGM-DREELVKELSRASKAKMAMLAANLRLVVSVAKRYR--FQKLSFQDLIQEGTFGLVKAAEKFDPERGFKFSTYATWWIKQSIMRGIADQSRIIRLPVHVHDFLNRVRKAT--LEMTDKNGKLP-----TDDELAEHLEVSAVRIQYYRDAA--QATLSMEAPRNIASKTSTSPGKKVEMGQGVSGPEKTP---DKQAQSDVMKQKVTELLMT-LSIREQEVVKARFGLGGA-------LPRTLEEVGRDFRLTRERVRQIEARALHKLR 354          
BLAST of mRNA_L-elsbetiae_contig1437.3225.1 vs. uniprot
Match: UPI0019C368EE (Uncharacterized protein n=1 Tax=Okeania sp. KiyG1 TaxID=2720165 RepID=UPI0019C368EE)

HSP 1 Score: 110 bits (276), Expect = 8.410e-24
Identity = 96/323 (29.72%), Postives = 158/323 (48.92%), Query Frame = 0
Query:  126 EEETALCEQIMENRRVQELQVELERKQSRPVTVHEWAVAAGHPSAHQLMDALQEGRKAQRTMVLCHQGLVRSVALRYNQVSRSLSSDDLTQEGNVGLLQAVEKFDPTRGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDTAMRILAASHALRLESAGGXXXXXXXXTDAQLALALSIPEASVTLYRKSALRQSVADLDNPALSGTPESXXXXXXXXXXXXXXXXERWPWEASRLAQAHVVRRDMMRAMQACLSPTEERALRLRFGLGGEGAAGEAGAALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLAY 448
            EEE +L  QI E   +++++  LE+K  R     EWA A    S  +L D LQ+GR+A+  MV  +  LV S+A RY   +R L   DL QEG++GL++A EKFD T+G +FS+Y ++ I+ ++ RAI D  R++R+PV+  +T  +I      + +E +          T  ++A  + +    +    + A  Q    LDNP   G  E+                       ++    + ++ D+   +   L+  E   LR+RFGL       + G   T K+IG T  L+ E IR++  +++ KL+   + N +L  Y
Sbjct:    4 EEEISLAHQIDELLALEQIRENLEKKLQRSPNETEWATAV-KMSIPELRDRLQQGRQAKNQMVTANLRLVTSIAKRYQ--NRGLDFQDLIQEGSLGLIRATEKFDHTKGYKFSTYGIWWIRQAITRAICDYSRIIRLPVYLYETISQIKKTVRQMSMERS--------LLTAEEVATRMEMTTEKLRFIVECA--QETLSLDNPIDKG--ENTIYQEAIEFDGETP---------AKYVFENCLQEDVETVLNT-LTERERNVLRMRFGL-------DDGQEKTLKDIGDTFNLTRERIRQIEAKALKKLE-DPKRNRILREY 293          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1437.3225.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMH8_9PHAE8.960e-18474.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPW8_ECTSI4.310e-17077.21RpoD n=1 Tax=Ectocarpus siliculosus TaxID=2880 Rep... [more]
A0A835ZDU2_9STRA8.310e-5138.62RNA_pol_sigma70 domain-containing protein n=1 Tax=... [more]
A0A835ZES3_9STRA7.200e-2833.76RNA polymerase n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A835ZBY3_9STRA1.010e-2630.89RNA polymerase n=1 Tax=Tribonema minus TaxID=30337... [more]
UPI0008F9CA573.070e-2632.12RNA polymerase sigma factor, RpoD/SigA family n=1 ... [more]
A0A5J4Z7E3_PORPP1.720e-2529.66RNA polymerase sigma factor SigA n=1 Tax=Porphyrid... [more]
A0A6H5K3H4_9PHAE1.050e-2432.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNI6_ECTSI5.350e-2432.85Chloroplast RNA-polymerase sigma factor n=1 Tax=Ec... [more]
UPI0019C368EE8.410e-2429.72Uncharacterized protein n=1 Tax=Okeania sp. KiyG1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000943RNA polymerase sigma-70PRINTSPR00046SIGMA70FCTcoord: 237..245
score: 53.26
coord: 424..435
score: 28.39
coord: 213..226
score: 64.19
coord: 409..424
score: 32.58
NoneNo IPR availableGENE3D1.20.120.1810coord: 103..258
e-value: 3.0E-29
score: 104.5
NoneNo IPR availablePANTHERPTHR30603RNA POLYMERASE SIGMA FACTOR RPOcoord: 118..442
NoneNo IPR availablePANTHERPTHR30603:SF45RNA POLYMERASE SIGMA FACTOR SIGBcoord: 118..442
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 32..42
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..42
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 20..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..452
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
IPR007627RNA polymerase sigma-70 region 2PFAMPF04542Sigma70_r2coord: 188..258
e-value: 8.3E-17
score: 60.7
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 364..449
e-value: 7.6E-9
score: 37.2
IPR007630RNA polymerase sigma-70 region 4PFAMPF04545Sigma70_r4coord: 380..436
e-value: 2.3E-6
score: 27.0
IPR014284RNA polymerase sigma-70 like domainTIGRFAMTIGR02937TIGR02937coord: 183..436
e-value: 8.9E-23
score: 78.7
IPR013325RNA polymerase sigma factor, region 2SUPERFAMILY88946Sigma2 domain of RNA polymerase sigma factorscoord: 120..258
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 368..444

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1437contigL-elsbetiae_contig1437:6109..8321 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1437.3225.1mRNA_L-elsbetiae_contig1437.3225.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1437 6064..8321 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1437.3225.1 ID=prot_L-elsbetiae_contig1437.3225.1|Name=mRNA_L-elsbetiae_contig1437.3225.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=453bp
MEQRHRGSCKMATARRRRRCCIVGAAIFSAWGHGRSGSSVSAFGFGGGLS
QQSVSRSLRWAGASVRSKVSIPRPGAARIRSRAPSPPSDGETLSATSRRR
SAFVVEGRVGPAAASTTQDWRDLSIEEETALCEQIMENRRVQELQVELER
KQSRPVTVHEWAVAAGHPSAHQLMDALQEGRKAQRTMVLCHQGLVRSVAL
RYNQVSRSLSSDDLTQEGNVGLLQAVEKFDPTRGTRFSSYAVFRIKASVL
RAIADKDRLVRVPVHAQDTAMRILAASHALRLESAGGGGASAPPPTDAQL
ALALSIPEASVTLYRKSALRQSVADLDNPALSGTPESGAGAAGGRAAGGR
MGGERWPWEASRLAQAHVVRRDMMRAMQACLSPTEERALRLRFGLGGEGA
AGEAGAALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLAYAD
LI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000943RNA_pol_sigma70
IPR007627RNA_pol_sigma70_r2
IPR036388WH-like_DNA-bd_sf
IPR007630RNA_pol_sigma70_r4
IPR014284RNA_pol_sigma-70_dom
IPR013325RNA_pol_sigma_r2
IPR013324RNA_pol_sigma_r3/r4-like