prot_L-elsbetiae_contig1434.3208.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1434.3208.1
Unique Nameprot_L-elsbetiae_contig1434.3208.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length181
Homology
BLAST of mRNA_L-elsbetiae_contig1434.3208.1 vs. uniprot
Match: D8LKH7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKH7_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 7.600e-71
Identity = 146/183 (79.78%), Postives = 148/183 (80.87%), Query Frame = 0
Query:    1 MKVTASIATAVALLAPAQAFVVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKK---DGGFNMGNMMEGLKKANEIGQKTKDLQKDLEALKVEGKSPCGMVTVTLTGQQMPLSCDISEEAMAEGAKVVGEKVAAAQQAAHTESLQVMSKRLAELYSEMGLPVGAGGGMPGAK 180
            MKVTASIATAVALLAPAQ FV+S                         XXXXXXXXXXXXXXX     DGGFNMGNMMEGLKKANEIGQKTKDLQKDLE LKVEGKSPCGMVTVT+TGQQMPLSCDISEEAMAEGAK V EKVAAAQQAAHTESLQ MSKRLAELYSEMGLPVGAGGGMPGAK
Sbjct:    1 MKVTASIATAVALLAPAQGFVISSSFVGAQHRCAAKSGASTTARPQQPXXXXXXXXXXXXXXXXXXXXDGGFNMGNMMEGLKKANEIGQKTKDLQKDLELLKVEGKSPCGMVTVTVTGQQMPLSCDISEEAMAEGAKAVAEKVAAAQQAAHTESLQTMSKRLAELYSEMGLPVGAGGGMPGAK 183          
BLAST of mRNA_L-elsbetiae_contig1434.3208.1 vs. uniprot
Match: A0A835YMC5_9STRA (Nucleoid-associated protein YbaB family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMC5_9STRA)

HSP 1 Score: 112 bits (279), Expect = 5.070e-28
Identity = 58/104 (55.77%), Postives = 76/104 (73.08%), Query Frame = 0
Query:   68 GFNMGNMMEGLKKANEIGQKTKDLQKDLEALKVEGKSPCGMVTVTLTGQQMPLSCDISEEAMAEGAKVVGEKVAAAQQAAHTESLQVMSKRLAELYSEMGLPVG 171
            G NMG+MME LKKANEIG+K+K++Q +LE +++EGKS  G   VT+TGQQ+P+ C+I E  ++EG + V   V  A   AH ESL VM K++AELY  MGLPVG
Sbjct:   62 GLNMGSMMESLKKANEIGRKSKEMQDELEKMRLEGKSSNGKAKVTMTGQQIPVGCEIDESLLSEGKEAVQTAVLEAMTEAHKESLMVMGKKMAELYQGMGLPVG 165          
BLAST of mRNA_L-elsbetiae_contig1434.3208.1 vs. uniprot
Match: A0A7S2WN77_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WN77_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 5.390e-17
Identity = 49/109 (44.95%), Postives = 75/109 (68.81%), Query Frame = 0
Query:   71 MGNMMEGLKKANEIGQKTKDLQKDLEALKVEGKSPCGMVTVTLTGQQMPLSCDISEEAMAEGAKVVGEKVAAAQQAAHTESLQVMSKRLAELYSEMGLP-VGAGGGMPG 178
            MG+MME  KK  EIG+KTK+LQK+L  +++E KS    V+VT++GQQ  LS  IS++AM  G + V +++  + Q AH +S +VM+ +L E+  ++ +P +G  GGMPG
Sbjct:   60 MGDMMEQFKKVQEIGRKTKELQKELAEMQIEEKSEDESVSVTISGQQAMLSAYISKDAMDAGKEEVEKRLMESLQKAHLKSFEVMNTKLMEITKDLDIPGLGGPGGMPG 168          
BLAST of mRNA_L-elsbetiae_contig1434.3208.1 vs. uniprot
Match: A0A7S3MQT1_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3MQT1_9SPIT)

HSP 1 Score: 82.0 bits (201), Expect = 2.460e-16
Identity = 46/108 (42.59%), Postives = 68/108 (62.96%), Query Frame = 0
Query:   71 MGNMMEGLKKANEIGQKTKDLQKDLEALKVEGKSPCGMVTVTLTGQQMPLSCDISEEAMAEGAKVVGEKVAAAQQAAHTESLQVMSKRLAELYSEMGLPVGAGGGMPG 178
            MGNMME +KKA E+G K K LQ++L   +VE  S  G VTV ++G Q+P+   +++E  ++GAK V   +  A + AH  S++    +L ELY+E+GLP+   GG  G
Sbjct:   65 MGNMMETIKKAQEMGVKVKALQEELVNTEVEATSADGGVTVVISGAQVPMDVKVTDEMCSKGAKAVSAAITDAMREAHKNSMEYSKSKLTELYAEIGLPMPPEGGAGG 172          
BLAST of mRNA_L-elsbetiae_contig1434.3208.1 vs. uniprot
Match: R1FFN9_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FFN9_EMIHU)

HSP 1 Score: 80.1 bits (196), Expect = 1.000e-15
Identity = 42/105 (40.00%), Postives = 69/105 (65.71%), Query Frame = 0
Query:   71 MGNMMEGLKKANEIGQKTKDLQKDLEALKVEGKSPCGMVTVTLTGQQMPLSCDISEEAMAEGAKVVGEKVAAAQQAAHTESLQVMSKRLAELYSEMGLPVGAGGG 175
            MGNMME +KKA E+G K K LQ++L   ++E  +  G VTV ++G Q+P+   +SE+  ++GA+ V + ++ A + AH  S++   ++L  LY+E+GLP+   GG
Sbjct:   56 MGNMMETIKKAQEVGVKVKALQEELVNTEIEATAADGGVTVVISGAQVPMDVKVSEDLCSKGAEAVSDAISLAMREAHKNSMEYSKQKLGALYAEIGLPMPPEGG 160          
BLAST of mRNA_L-elsbetiae_contig1434.3208.1 vs. uniprot
Match: A0A0M0JAF8_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JAF8_9EUKA)

HSP 1 Score: 80.1 bits (196), Expect = 1.770e-15
Identity = 41/98 (41.84%), Postives = 67/98 (68.37%), Query Frame = 0
Query:   73 NMMEGLKKANEIGQKTKDLQKDLEALKVEGKSPCGMVTVTLTGQQMPLSCDISEEAMAEGAKVVGEKVAAAQQAAHTESLQVMSKRLAELYSEMGLPV 170
            NMME +KKA ++G K K LQ++L   ++E  S  G  TV ++G Q+P+S +++E  +A+G+K V E V+ A + AHT S+    +++A LY+E+GLP+
Sbjct:   88 NMMETIKKAQQVGVKVKALQEELAQTEIEAISADGGCTVVISGAQVPISVEVTEALLAKGSKAVSEAVSVAAKEAHTNSVSYAQEQMATLYAEIGLPI 185          
BLAST of mRNA_L-elsbetiae_contig1434.3208.1 vs. uniprot
Match: A0A7S3ESI0_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ESI0_9EUKA)

HSP 1 Score: 75.1 bits (183), Expect = 9.190e-14
Identity = 43/107 (40.19%), Postives = 68/107 (63.55%), Query Frame = 0
Query:   65 KDGGFNMG-NMMEGLKKANEIGQKTKDLQKDLEALKVEGKSPCGMVTVTLTGQQMPLSCDISEEAMAEGAKVVGEKVAAAQQAAHTESLQVMSKRLAELYSEMGLPV 170
            KD G   G NMME +KKA ++G K K+LQ++L   ++E  +  G V+V+++G  +P+S  +S E +A+GA+ V   V  A + AH  S+     R+ ELY+E+GLP+
Sbjct:   55 KDEGMGGGLNMMETIKKAQQVGVKVKELQEELANTEIEATAAEGGVSVSVSGANVPISVTVSPELVAQGAEAVSTAVTLATKEAHRNSMAYAKDRMTELYTEIGLPM 161          
BLAST of mRNA_L-elsbetiae_contig1434.3208.1 vs. uniprot
Match: A0A7S4B6N1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B6N1_CHRCT)

HSP 1 Score: 75.1 bits (183), Expect = 1.230e-13
Identity = 45/102 (44.12%), Postives = 69/102 (67.65%), Query Frame = 0
Query:   76 EGLKKANEIGQKTKDLQKDLEALKVEGKSPCGMVTVTLTGQQMPLSCDISEEAMAEGAKVVGEKVAAAQQAAHTESLQVMSKRLAELYSEMGLPVGAGGGMP 177
            E +KK +E+GQK ++LQ++L   +VE  +  G + V +TG Q+PLS ++S+E +A GA+ + E+VAAA + AH +S     +R+AELY +MGL    G GMP
Sbjct:   83 EMMKKYSEVGQKVQELQEELTQTEVECSTNEGGIVVKVTGTQVPLSVEVSDEMLAGGAEKLSEQVAAALKQAHAKSGGYAQQRMAELYDQMGL----GAGMP 180          
BLAST of mRNA_L-elsbetiae_contig1434.3208.1 vs. uniprot
Match: A0A2N5JN90_9CYAN (Nucleoid-associated protein CV045_10450 n=1 Tax=Cyanobacteria bacterium M5B4 TaxID=2054928 RepID=A0A2N5JN90_9CYAN)

HSP 1 Score: 73.2 bits (178), Expect = 1.280e-13
Identity = 38/103 (36.89%), Postives = 70/103 (67.96%), Query Frame = 0
Query:   67 GGFNMGNMMEGLKKANEIGQKTKDLQKDLEALKVEGKSPCGMVTVTLTGQQMPLSCDISEEAMAEGAKVVGEKVAAAQQAAHTESLQVMSKRLAELYSEMGLP 169
            GGF +G + E  +KAN++ +++++LQ +LE ++++G++  G+V VT++G Q P +  I+ EA+ +G +V+ + V  A + A+  S Q M  R+ EL +E+GLP
Sbjct:    5 GGFGLGKIKEAFQKANQLKERSQELQSELEEMRLDGEAGGGLVKVTVSGNQEPQAIVIAPEAIEQGKEVLEDLVLTAMRNAYQLSAQTMKNRMEELTNELGLP 107          
BLAST of mRNA_L-elsbetiae_contig1434.3208.1 vs. uniprot
Match: UPI0019E43CCB (YbaB/EbfC family nucleoid-associated protein n=1 Tax=filamentous cyanobacterium LEGE 11480 TaxID=2777977 RepID=UPI0019E43CCB)

HSP 1 Score: 72.4 bits (176), Expect = 2.790e-13
Identity = 41/105 (39.05%), Postives = 68/105 (64.76%), Query Frame = 0
Query:   68 GFNMGNMME---GLKKANEIGQKTKDLQKDLEALKVEGKSPCGMVTVTLTGQQMPLSCDISEEAMAEGAKVVGEKVAAAQQAAHTESLQVMSKRLAELYSEMGLP 169
            GF +G M E    +KKA ++ +  K LQ++LE ++++G++  G VTVT++G Q PL   ISEEA+ EGA+V+ + V AA + A+ +S + M  ++ +L   + LP
Sbjct:    8 GFGLGKMKELTEAIKKAQQVQEGAKQLQEELEDMRIQGEAGGGKVTVTMSGNQEPLDVSISEEALGEGAEVLSDLVLAAVKDAYGKSTETMKGKMEDLTGGLNLP 112          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1434.3208.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D8LKH7_ECTSI7.600e-7179.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YMC5_9STRA5.070e-2855.77Nucleoid-associated protein YbaB family n=1 Tax=Tr... [more]
A0A7S2WN77_9STRA5.390e-1744.95Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3MQT1_9SPIT2.460e-1642.59Hypothetical protein (Fragment) n=1 Tax=Favella eh... [more]
R1FFN9_EMIHU1.000e-1540.00Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A0M0JAF8_9EUKA1.770e-1541.84Uncharacterized protein (Fragment) n=1 Tax=Chrysoc... [more]
A0A7S3ESI0_9EUKA9.190e-1440.19Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S4B6N1_CHRCT1.230e-1344.12Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A2N5JN90_9CYAN1.280e-1336.89Nucleoid-associated protein CV045_10450 n=1 Tax=Cy... [more]
UPI0019E43CCB2.790e-1339.05YbaB/EbfC family nucleoid-associated protein n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 81..101
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..180
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.759
IPR004401Nucleoid-associated protein YbaB/EbfC familyPFAMPF02575YbaB_DNA_bdcoord: 79..166
e-value: 1.0E-13
score: 51.3
IPR004401Nucleoid-associated protein YbaB/EbfC familyPANTHERPTHR33449FAMILY NOT NAMEDcoord: 31..175
IPR036894Nucleoid-associated protein YbaB-like domain superfamilyGENE3D3.30.1310.10coord: 67..174
e-value: 3.9E-18
score: 67.3
IPR036894Nucleoid-associated protein YbaB-like domain superfamilySUPERFAMILY82607YbaB-likecoord: 78..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1434contigL-elsbetiae_contig1434:17298..22739 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1434.3208.1mRNA_L-elsbetiae_contig1434.3208.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1434 17298..22739 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1434.3208.1 ID=prot_L-elsbetiae_contig1434.3208.1|Name=mRNA_L-elsbetiae_contig1434.3208.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=181bp
MKVTASIATAVALLAPAQAFVVSSSSFVAAQQRSAAPSTSRLQPVMLFGG
GGGAKPAEGGGGDKKDGGFNMGNMMEGLKKANEIGQKTKDLQKDLEALKV
EGKSPCGMVTVTLTGQQMPLSCDISEEAMAEGAKVVGEKVAAAQQAAHTE
SLQVMSKRLAELYSEMGLPVGAGGGMPGAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004401YbaB/EbfC
IPR036894YbaB-like_sf