prot_L-elsbetiae_contig14336.3203.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14336.3203.1
Unique Nameprot_L-elsbetiae_contig14336.3203.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length176
Homology
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BLAST of mRNA_L-elsbetiae_contig14336.3203.1 vs. uniprot
Match: A0A6H5JLT2_9PHAE (GPS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT2_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 4.800e-31
Identity = 72/140 (51.43%), Postives = 99/140 (70.71%), Query Frame = 0 
Query:    1 GAWDAAGLATESMAVLP---SSDGGGSDVNLTCLSFHLSDFTVSAEGLDTAFRPVSPTAGVDVVLKVRNVSFMGVVLLLMVLLLLAVARITSRMADAKTKLARRLSGRADDWYIATGTAKEHPSLFISVEADPLVEVRHR 137
            G WD  GL TE+ A+ P   S+ GG +D+N+TC SFHLSDFT+SA+ + + F+ V  TAG+ VVL+VR++S MGV+LLL VLLLL V R  SRMAD KT L++ L G+ D+ Y+ATG ++  P+L   V+A+P  +  HR
Sbjct:  309 GLWDEDGLVTEA-AITPIDESNAGGLTDLNVTCWSFHLSDFTISADEVGSGFQHVDLTAGIAVVLEVRDISKMGVLLLLFVLLLLVVLRTISRMADVKTNLSKELEGKTDEVYLATGKSRNRPTLGALVQANPTPDTHHR 447
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BLAST of mRNA_L-elsbetiae_contig14336.3203.1 vs. uniprot
Match: D7G4X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X3_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 3.050e-25
Identity = 64/140 (45.71%), Postives = 92/140 (65.71%), Query Frame = 0 
Query:    1 GAWDAAGLATESMAVLP---SSDGGGSDVNLTCLSFHLSDFTVSAEGLDTAFRPVSPTAGVDVVLKVRNVSFMGVVLLLMVLLLLAVARITSRMADAKTKLARRLSGRADDWYIATGTAKEHPSLFISVEADPLVEVRHR 137
            G WD  GL TE+ A+ P   S+  G + +N+TC SFHLSDFT+SA+ + + F+ V  TAG+ V LKVR +S MG +LLL V     + R T+RMAD KT L+++L+ + D+ Y+ATG ++  P+L   V+ADP  +  HR
Sbjct: 1281 GLWDEDGLVTEA-AITPMDESNADGLTGLNVTCWSFHLSDFTISADEVGSGFQHVDLTAGIAVFLKVREISKMGGLLLLFVXXXXXLLRTTARMADVKTNLSKQLARKTDEVYVATGKSRNRPTLAALVQADPTPDTHHR 1419
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14336.3203.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JLT2_9PHAE4.800e-3151.43GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G4X3_ECTSI3.050e-2545.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..87
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 88..175
NoneNo IPR availableTMHMMTMhelixcoord: 67..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14336contigL-elsbetiae_contig14336:1690..3286 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14336.3203.1mRNA_L-elsbetiae_contig14336.3203.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14336 1690..3286 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14336.3203.1 ID=prot_L-elsbetiae_contig14336.3203.1|Name=mRNA_L-elsbetiae_contig14336.3203.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=176bp
GAWDAAGLATESMAVLPSSDGGGSDVNLTCLSFHLSDFTVSAEGLDTAFR
PVSPTAGVDVVLKVRNVSFMGVVLLLMVLLLLAVARITSRMADAKTKLAR
RLSGRADDWYIATGTAKEHPSLFISVEADPLVEVRHRRHHYGHHKHHHGH
RHGRRRRRKERRMKLLRRHLIQRCV*
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