prot_L-elsbetiae_contig14332.3202.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14332.3202.1
Unique Nameprot_L-elsbetiae_contig14332.3202.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length164
Homology
BLAST of mRNA_L-elsbetiae_contig14332.3202.1 vs. uniprot
Match: A0A6H5L7H3_9PHAE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7H3_9PHAE)

HSP 1 Score: 278 bits (711), Expect = 3.520e-86
Identity = 143/155 (92.26%), Postives = 149/155 (96.13%), Query Frame = 0
Query:    1 VSELDVLVSFAEVAALAPTELVRPTMRDVGTGVLKVKGCRHPCLEWQDEMEFIPNDYDMSSADASFVVVTGPNMGGKSTYIRALGAVTVMAQVGSFVPCESAEISVRDAVFARVGAGDAQQRGVSTFMAEMLEASAIISAASRDSLIIIDELGRG 155
            VSELD+LVSFA+VAALAPTELVRPTM+D GTGVLKV GCRHPCLEWQDEM FIPNDYDMSS  ASFVVVTGPNMGGKSTYIR LGAVTVMAQVGSFVPCE+AE+SVRDAVFARVGAGDAQQRGVSTFMAEMLEASAIISAAS+DSLIIIDELGRG
Sbjct:  503 VSELDILVSFADVAALAPTELVRPTMKDKGTGVLKVIGCRHPCLEWQDEMNFIPNDYDMSSDGASFVVVTGPNMGGKSTYIRTLGAVTVMAQVGSFVPCETAEMSVRDAVFARVGAGDAQQRGVSTFMAEMLEASAIISAASKDSLIIIDELGRG 657          
BLAST of mRNA_L-elsbetiae_contig14332.3202.1 vs. uniprot
Match: A0A7S2V0D9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0D9_9STRA)

HSP 1 Score: 209 bits (531), Expect = 5.930e-65
Identity = 110/156 (70.51%), Postives = 124/156 (79.49%), Query Frame = 0
Query:    1 VSELDVLVSFAEVAALAPTELVRPTMRDVGTGVLKVKGCRHPCLEWQDEME-FIPNDYDMSSADASFVVVTGPNMGGKSTYIRALGAVTVMAQVGSFVPCESAEISVRDAVFARVGAGDAQQRGVSTFMAEMLEASAIISAASRDSLIIIDELGRG 155
            V+ELDVLVSFA  AALAP E  RP MR  G+G L V   RHPC+E QD +E FIPNDY +    + F V+TGPNMGGKSTYIRALGA+ +MAQVGSFVPC SAE+SV D V ARVGAGD QQRG+STFMAEMLEASAI+  A+ DSL+IIDELGRG
Sbjct:    6 VAELDVLVSFAHTAALAPGEYCRPVMRKRGSGCLIVHQARHPCVEMQDSVERFIPNDYILKKDSSWFNVITGPNMGGKSTYIRALGAIVIMAQVGSFVPCSSAELSVMDCVLARVGAGDRQQRGLSTFMAEMLEASAILQTATSDSLVIIDELGRG 161          
BLAST of mRNA_L-elsbetiae_contig14332.3202.1 vs. uniprot
Match: A0A835YUY7_9STRA (Muts protein-like protein 2A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUY7_9STRA)

HSP 1 Score: 218 bits (554), Expect = 8.730e-64
Identity = 110/155 (70.97%), Postives = 128/155 (82.58%), Query Frame = 0
Query:    1 VSELDVLVSFAEVAALAPTELVRPTMRDVGTGVLKVKGCRHPCLEWQDEMEFIPNDYDMSSADASFVVVTGPNMGGKSTYIRALGAVTVMAQVGSFVPCESAEISVRDAVFARVGAGDAQQRGVSTFMAEMLEASAIISAASRDSLIIIDELGRG 155
            V+ELDVLV+ A  AA+AP + VRP + D G+GVL V+G RHPCLEWQ++M F+PN Y M      F+VVTGPNMGGKSTYIR LG++ VMAQ+GSFVP  SAEIS+ DA+FARVGAGDAQQRGVSTFMAEMLEASAI+ AA+  SLIIIDELGRG
Sbjct:  444 VAELDVLVALAHTAAMAPEQYVRPKLLDAGSGVLDVQGARHPCLEWQEDMSFMPNSYAMKRDKGRFLVVTGPNMGGKSTYIRTLGSIVVMAQMGSFVPAASAEISIVDALFARVGAGDAQQRGVSTFMAEMLEASAILDAATDKSLIIIDELGRG 598          
BLAST of mRNA_L-elsbetiae_contig14332.3202.1 vs. uniprot
Match: A0A7S3GQQ0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GQQ0_9STRA)

HSP 1 Score: 198 bits (503), Expect = 5.960e-60
Identity = 100/156 (64.10%), Postives = 123/156 (78.85%), Query Frame = 0
Query:    1 VSELDVLVSFAEVAALAPTELVRPTMRDVGTGVLKVKGCRHPCLEWQDEM-EFIPNDYDMSSADASFVVVTGPNMGGKSTYIRALGAVTVMAQVGSFVPCESAEISVRDAVFARVGAGDAQQRGVSTFMAEMLEASAIISAASRDSLIIIDELGRG 155
            +SELDVL+SFA  AALAP   VRPT+   G G+  +KG RHPC+E  D   +FI NDYD+    +SF ++TGPNMGGKSTYIRA+G +TV+AQVG FVPC+SA +SV D + ARVGAGDA Q+GVSTFMAEMLE++ ++  A+RDSLIIIDELGRG
Sbjct:   31 ISELDVLLSFATAAALAPGVYVRPTVLKQGEGICDLKGARHPCVELMDSTSQFIANDYDLIRDKSSFQIITGPNMGGKSTYIRAVGCITVLAQVGCFVPCDSATLSVTDCILARVGAGDAVQKGVSTFMAEMLESAVMLQTATRDSLIIIDELGRG 186          
BLAST of mRNA_L-elsbetiae_contig14332.3202.1 vs. uniprot
Match: E1ZJU0_CHLVA (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZJU0_CHLVA)

HSP 1 Score: 194 bits (494), Expect = 2.120e-58
Identity = 96/154 (62.34%), Postives = 120/154 (77.92%), Query Frame = 0
Query:    2 SELDVLVSFAEVAALAPTELVRPTMRDVGTGVLKVKGCRHPCLEWQDEMEFIPNDYDMSSADASFVVVTGPNMGGKSTYIRALGAVTVMAQVGSFVPCESAEISVRDAVFARVGAGDAQQRGVSTFMAEMLEASAIISAASRDSLIIIDELGRG 155
            +ELD+L +F EVAA AP   VRPTM     G + ++GCRHPCLE Q+ ++FIPND  M +  + F ++TGPNMGGKST+IR +G   +MAQ+GSFVP +SA ISVRDA+FARVGAGD QQRG+STFMAEMLE +AI+  A+  SL+IIDELGRG
Sbjct:   52 AELDLLAAFGEVAAAAPASYVRPTMLPSEEGEISLRGCRHPCLEVQEGVDFIPNDCLMRTGQSWFHIITGPNMGGKSTFIRQVGLAVLMAQIGSFVPADSARISVRDAIFARVGAGDCQQRGLSTFMAEMLETAAILKGATSSSLVIIDELGRG 205          
BLAST of mRNA_L-elsbetiae_contig14332.3202.1 vs. uniprot
Match: A0A7J6APU9_AMEME (DNA mismatch repair protein Msh2 n=1 Tax=Ameiurus melas TaxID=219545 RepID=A0A7J6APU9_AMEME)

HSP 1 Score: 187 bits (474), Expect = 1.640e-56
Identity = 92/155 (59.35%), Postives = 120/155 (77.42%), Query Frame = 0
Query:    1 VSELDVLVSFAEVAALAPTELVRPTMRDVGTGVLKVKGCRHPCLEWQDEMEFIPNDYDMSSADASFVVVTGPNMGGKSTYIRALGAVTVMAQVGSFVPCESAEISVRDAVFARVGAGDAQQRGVSTFMAEMLEASAIISAASRDSLIIIDELGRG 155
            +++LD +VSF+ V+  AP   VRP + + GTG L +KG RHPC+E QD++ FIPND   +     F ++TGPNMGGKSTYIR +G + +MAQVG FVPC+ AE+SV D+V ARVGAGD+Q +GVSTFMAEMLE +AI+ +A+ +SLIIIDELGRG
Sbjct:   56 IAQLDAVVSFSVVSHAAPVPYVRPRILEKGTGRLVLKGARHPCVEAQDDVAFIPNDVTFTKGKEMFHIITGPNMGGKSTYIRQVGVIVLMAQVGCFVPCDEAEVSVVDSVLARVGAGDSQIKGVSTFMAEMLETAAILRSATENSLIIIDELGRG 210          
BLAST of mRNA_L-elsbetiae_contig14332.3202.1 vs. uniprot
Match: C0IMY3_VERVE (Mismatch repair MutS-like protein (Fragment) n=1 Tax=Vermamoeba vermiformis TaxID=5778 RepID=C0IMY3_VERVE)

HSP 1 Score: 194 bits (494), Expect = 1.190e-55
Identity = 96/155 (61.94%), Postives = 123/155 (79.35%), Query Frame = 0
Query:    1 VSELDVLVSFAEVAALAPTELVRPTMRDVGTGVLKVKGCRHPCLEWQDEMEFIPNDYDMSSADASFVVVTGPNMGGKSTYIRALGAVTVMAQVGSFVPCESAEISVRDAVFARVGAGDAQQRGVSTFMAEMLEASAIISAASRDSLIIIDELGRG 155
            ++ELDV  SFA+VA  AP   +RP M+++GTG + +K  RHP LE Q +M FIPND D+   ++SF ++TGPNMGGKST+IR +G + +MAQ+GSFVPC+SAEIS+ DA+ ARVGAGD+Q RGVSTFMAEMLE S I+  A+ +SLIIIDELGRG
Sbjct:  497 IAELDVYTSFADVAYTAPYSYIRPDMKELGTGNVVLKKARHPVLEIQPDMTFIPNDTDLVRGESSFQIITGPNMGGKSTFIRQVGVIVLMAQIGSFVPCDSAEISICDAILARVGAGDSQLRGVSTFMAEMLETSTILHTATPNSLIIIDELGRG 651          
BLAST of mRNA_L-elsbetiae_contig14332.3202.1 vs. uniprot
Match: T1IP55_STRMM (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1IP55_STRMM)

HSP 1 Score: 196 bits (498), Expect = 2.790e-55
Identity = 97/155 (62.58%), Postives = 122/155 (78.71%), Query Frame = 0
Query:    1 VSELDVLVSFAEVAALAPTELVRPTMRDVGTGVLKVKGCRHPCLEWQDEMEFIPNDYDMSSADASFVVVTGPNMGGKSTYIRALGAVTVMAQVGSFVPCESAEISVRDAVFARVGAGDAQQRGVSTFMAEMLEASAIISAASRDSLIIIDELGRG 155
            +S LDVL+SFA VA  APT  VRP +   G+G+LK+   RHPCLE QD+++FIPND        +F ++TGPNMGGKSTYIR++G   V+AQ+GSF+PCESAEIS+ D++ ARVGAGD+Q +GVSTFM EMLE +AI+ AA+ DSLIIIDELGRG
Sbjct:  593 ISRLDVLLSFAFVAEKAPTSYVRPKLFSKGSGILKLTQARHPCLEVQDDVKFIPNDVYFEKDKTTFHIITGPNMGGKSTYIRSIGVNVVLAQIGSFIPCESAEISIVDSILARVGAGDSQMKGVSTFMVEMLETAAILRAATSDSLIIIDELGRG 747          
BLAST of mRNA_L-elsbetiae_contig14332.3202.1 vs. uniprot
Match: UPI000511AF90 (DNA mismatch repair protein Msh2-like n=1 Tax=Pelecanus crispus TaxID=36300 RepID=UPI000511AF90)

HSP 1 Score: 184 bits (468), Expect = 5.430e-55
Identity = 90/155 (58.06%), Postives = 116/155 (74.84%), Query Frame = 0
Query:    1 VSELDVLVSFAEVAALAPTELVRPTMRDVGTGVLKVKGCRHPCLEWQDEMEFIPNDYDMSSADASFVVVTGPNMGGKSTYIRALGAVTVMAQVGSFVPCESAEISVRDAVFARVGAGDAQQRGVSTFMAEMLEASAIISAASRDSLIIIDELGRG 155
            +++LD +VSFA V+  AP   VRP + + G G + +KG RHPC+E QDE+ FIPND         F ++TGPNMGGKSTYIR  G + +MAQ+G FVPC+SAEI++ D + ARVGAGD+Q +GVSTFMAEMLE ++I+  AS +SLIIIDELGRG
Sbjct:   95 IAQLDAIVSFAHVSNGAPVPYVRPVILEKGQGRIVLKGARHPCIEVQDEVAFIPNDITFEKGKQMFHIITGPNMGGKSTYIRQTGLIVLMAQIGCFVPCDSAEITIVDCILARVGAGDSQLKGVSTFMAEMLETASILRTASENSLIIIDELGRG 249          
BLAST of mRNA_L-elsbetiae_contig14332.3202.1 vs. uniprot
Match: F7FIJ9_ORNAN (DNA mismatch repair protein n=2 Tax=Monotremata TaxID=9255 RepID=F7FIJ9_ORNAN)

HSP 1 Score: 194 bits (494), Expect = 1.110e-54
Identity = 97/154 (62.99%), Postives = 119/154 (77.27%), Query Frame = 0
Query:    2 SELDVLVSFAEVAALAPTELVRPTMRDVGTGVLKVKGCRHPCLEWQDEMEFIPNDYDMSSADASFVVVTGPNMGGKSTYIRALGAVTVMAQVGSFVPCESAEISVRDAVFARVGAGDAQQRGVSTFMAEMLEASAIISAASRDSLIIIDELGRG 155
            ++LD +VSFA VA  AP   VRPT+ D G G L ++GCRH C+E QDE+ FIPND        +F +VTGPNMGGKSTYIR  G V +MAQ+G FVPCE+AE+S+ D + ARVGAGD+Q +GVSTFMAEMLE ++I+ +ASRDSLIIIDELGRG
Sbjct:  600 AQLDAMVSFAHVATSAPVPYVRPTILDKGHGRLALRGCRHACVEVQDEVAFIPNDVVFERGRQTFHIVTGPNMGGKSTYIRQTGVVVLMAQIGCFVPCEAAEVSIVDRILARVGAGDSQLKGVSTFMAEMLETASILRSASRDSLIIIDELGRG 753          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14332.3202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7H3_9PHAE3.520e-8692.26DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A7S2V0D9_9STRA5.930e-6570.51Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835YUY7_9STRA8.730e-6470.97Muts protein-like protein 2A n=1 Tax=Tribonema min... [more]
A0A7S3GQQ0_9STRA5.960e-6064.10Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
E1ZJU0_CHLVA2.120e-5862.34DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A7J6APU9_AMEME1.640e-5659.35DNA mismatch repair protein Msh2 n=1 Tax=Ameiurus ... [more]
C0IMY3_VERVE1.190e-5561.94Mismatch repair MutS-like protein (Fragment) n=1 T... [more]
T1IP55_STRMM2.790e-5562.58DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
UPI000511AF905.430e-5558.06DNA mismatch repair protein Msh2-like n=1 Tax=Pele... [more]
F7FIJ9_ORNAN1.110e-5462.99DNA mismatch repair protein n=2 Tax=Monotremata Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000432DNA mismatch repair protein MutS, C-terminalSMARTSM00534mutATP5coord: 64..161
e-value: 1.5E-12
score: 52.7
IPR000432DNA mismatch repair protein MutS, C-terminalPFAMPF00488MutS_Vcoord: 67..156
e-value: 3.5E-40
score: 138.0
NoneNo IPR availableGENE3D3.40.50.300coord: 22..156
e-value: 1.0E-57
score: 197.5
NoneNo IPR availablePANTHERPTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERcoord: 1..156
IPR032642DNA mismatch repair protein Msh2PANTHERPTHR11361:SF35DNA MISMATCH REPAIR PROTEIN MSH2coord: 1..156
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 23..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14332contigL-elsbetiae_contig14332:471..2405 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14332.3202.1mRNA_L-elsbetiae_contig14332.3202.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14332 471..2405 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14332.3202.1 ID=prot_L-elsbetiae_contig14332.3202.1|Name=mRNA_L-elsbetiae_contig14332.3202.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=164bp
VSELDVLVSFAEVAALAPTELVRPTMRDVGTGVLKVKGCRHPCLEWQDEM
EFIPNDYDMSSADASFVVVTGPNMGGKSTYIRALGAVTVMAQVGSFVPCE
SAEISVRDAVFARVGAGDAQQRGVSTFMAEMLEASAIISAASRDSLIIID
ELGRGMYCLLACF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000432DNA_mismatch_repair_MutS_C
IPR032642Msh2
IPR027417P-loop_NTPase