prot_L-elsbetiae_contig14239.3146.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14239.3146.1
Unique Nameprot_L-elsbetiae_contig14239.3146.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length411
Homology
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BLAST of mRNA_L-elsbetiae_contig14239.3146.1 vs. uniprot
Match: D8LDW8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDW8_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 7.020e-17
Identity = 57/141 (40.43%), Postives = 70/141 (49.65%), Query Frame = 0 
Query:  272 VPEEPEHAYCSSVRCPRQTHRLVEGADTKRCKVVDFMAPTP-PRNEDRYGSYSYEFM-DYDDDYFPGGXXXXXXXXXXXXXXXXXXXXXXXXYGEEEEGRGSDMSPDWGDYTSWMEEEEGEEYCDLRTCCAEKEYGVWGLE 410
             P EP++  CSSV+CP +THR +EGA+ K C+  D MAPTP PR+     ++ YEF  D  DDY  G                         YG  EEG G  +        +       EEYCDL TCC EKEYG+WGLE
Sbjct:  205 TPAEPDYDTCSSVQCPSETHRPIEGAEEKTCRTADLMAPTPAPRDGGGSYAFDYEFSSDEWDDYVAG-------------------YSYYFGYGTGEEG-GKALDXXXXXXGA-------EEYCDLSTCCEEKEYGLWGLE 318
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14239.3146.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDW8_ECTSI7.020e-1740.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14239contigL-elsbetiae_contig14239:1324..3866 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14239.3146.1mRNA_L-elsbetiae_contig14239.3146.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14239 1127..3869 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14239.3146.1 ID=prot_L-elsbetiae_contig14239.3146.1|Name=mRNA_L-elsbetiae_contig14239.3146.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=411bp
MGQQHKTPGLRGGSRRATSADRPVCNSIGCPDGYIPIDKAWETECHNGDC
RVEQCCEAMCACYGCPDNYTPNQDEADELCHGGVCTAEQCCETAAPTCNS
IGCPNGYTPIDKAWETECSNGDCRVEQCCQAMCACYGCPDNYVPIKDADI
VFCDDGRCTTEQCCDHHEGRREDPKRDEEDERCAGFSCPRNTEPREEVRH
DLCVGACGCTPEQCCEDNEGSRPERETPEDRSAFCKDFDCPPGYYIADGV
DYVECFAEECERDECCAKDREVPEEPEHAYCSSVRCPRQTHRLVEGADTK
RCKVVDFMAPTPPRNEDRYGSYSYEFMDYDDDYFPGGGGGGGGGGGRGGG
GRGGYSYDYGYYGEEEEGRGSDMSPDWGDYTSWMEEEEGEEYCDLRTCCA
EKEYGVWGLE*
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