prot_L-elsbetiae_contig14197.3118.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14197.3118.1
Unique Nameprot_L-elsbetiae_contig14197.3118.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length148
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14197.3118.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..34
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 53..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..91
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 92..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..52
NoneNo IPR availableTMHMMTMhelixcoord: 33..52
NoneNo IPR availableTMHMMTMhelixcoord: 12..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14197contigL-elsbetiae_contig14197:240..683 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14197.3118.1mRNA_L-elsbetiae_contig14197.3118.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14197 22..773 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14197.3118.1 ID=prot_L-elsbetiae_contig14197.3118.1|Name=mRNA_L-elsbetiae_contig14197.3118.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=148bp
MSVDAACCEKTTRIVYLYCSFVCALFLWMEREARRAILLLLCNLLLFEVV
GFRTSWKKKSHAEVVKGGREAGYVMGYCTSLFSPFNMWLMFRAECFVCAL
NLAFPLHTPEICGPTRPRLYTIHAALTRSSMYITSKSKCPLSNLQLI*
back to top