prot_L-elsbetiae_contig1418.3106.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1418.3106.1
Unique Name	prot_L-elsbetiae_contig1418.3106.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	70

Homology

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BLAST of mRNA_L-elsbetiae_contig1418.3106.1 vs. uniprot
Match: A0A6H5KFF7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFF7_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 1.570e-24
Identity = 57/73 (78.08%), Postives = 60/73 (82.19%), Query Frame = 0

Query:    1 MKFSTVAASLCVLGSASAFVFPMPVRSAGATRVSASLEEDAVAKTKAREALIGSAGMEQLIKMV---DGRDAE 70
            MKFSTVAASLCVLGSASAFV P+P RS  ATR+SASL+E A  K KAREALIGSAGMEQLIKMV   DG D E
Sbjct:    1 MKFSTVAASLCVLGSASAFVLPVPARSGVATRMSASLDEAAAEKAKAREALIGSAGMEQLIKMVAQDDGEDEE 73

[Close]

BLAST of mRNA_L-elsbetiae_contig1418.3106.1 vs. uniprot
Match: D7G1W7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1W7_ECTSI)

HSP 1 Score: 48.5 bits (114), Expect = 5.190e-6
Identity = 29/41 (70.73%), Postives = 32/41 (78.05%), Query Frame = 0

Query:   33 VSASLEEDAVAKTKAREALIGSAGMEQLIKMV---DGRDAE 70
            +S+SL+E A  K KAREALIGSAGMEQLIKMV   DG D E
Sbjct:    1 MSSSLDEAAAEKAKAREALIGSAGMEQLIKMVAQDDGEDEE 41

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1418.3106.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1418.3106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KFF7_9PHAE	1.570e-24	78.08	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G1W7_ECTSI	5.190e-6	70.73	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 14..18
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 19..70
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..13
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..18 score: 0.729

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1418	contig	L-elsbetiae_contig1418:15124..17010 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1418.3106.1	mRNA_L-elsbetiae_contig1418.3106.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1418 15124..17010 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1418.3106.1 ID=prot_L-elsbetiae_contig1418.3106.1|Name=mRNA_L-elsbetiae_contig1418.3106.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=70bp
MKFSTVAASLCVLGSASAFVFPMPVRSAGATRVSASLEEDAVAKTKAREA
LIGSAGMEQLIKMVDGRDAE