prot_L-elsbetiae_contig14176.3103.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14176.3103.1
Unique Nameprot_L-elsbetiae_contig14176.3103.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length252
Homology
BLAST of mRNA_L-elsbetiae_contig14176.3103.1 vs. uniprot
Match: A0A6H5JF66_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF66_9PHAE)

HSP 1 Score: 263 bits (673), Expect = 7.890e-84
Identity = 138/235 (58.72%), Postives = 167/235 (71.06%), Query Frame = 0
Query:    1 MEELQNTHMNSGENPDDYFNQKHLLRLKAEKMGETVSDRWFKDICVSGFNDEYKDEKMTVYRDSTFDVAQMQTIMRNMFLDEQSRKGSKGRIAGRGIVMAATSEGITCFACHEPGHSRKDCPQVKAKTVTRKKTKPKGAAKWCSIHYTTSHSDEECYVQGAKRPERSGATAKAFTACTQXXXXSGTPNRASTAKEVTDAVTSTTKLAIDFTMDAD-FDEGFMFAIRSKWKRLHSQ 234
            MEEL+N  MN GENPD+YFNQKHLLR + +KMGE +SDR FKDICV GF+DEYKD K+ V+RD TF+V  MQ+ MRN+FLDEQSRKG KGRIAGRG  MA T+  I C +C+EPGH R++CP++K +   +KKTKP GA KWCS H TTSHSDEECY QG KRPE +  ++KAFTAC+   XX    N+  +  EV           +DFT D D FD GFMFA  S+ +   SQ
Sbjct:  138 MEELENNPMNPGENPDNYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRA--KKKTKPAGATKWCSKHNTTSHSDEECYQQGGKRPEDTKDSSKAFTACSNCTXXXXXXNKHDSNDEVA---------VVDFTRDEDAFDSGFMFATCSRSQDATSQ 361          
BLAST of mRNA_L-elsbetiae_contig14176.3103.1 vs. uniprot
Match: A0A6H5L580_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L580_9PHAE)

HSP 1 Score: 260 bits (665), Expect = 5.200e-79
Identity = 133/228 (58.33%), Postives = 159/228 (69.74%), Query Frame = 0
Query:    1 MEELQNTHMNSGENPDDYFNQKHLLRLKAEKMGETVSDRWFKDICVSGFNDEYKDEKMTVYRDSTFDVAQMQTIMRNMFLDEQSRKGSKGRIAGRGIVMAATSEGITCFACHEPGHSRKDCPQVKAKTVTRKKTKPKGAAKWCSIHYTTSHSDEECYVQGAKRPERSGATAKAFTACTQXXXXSGTPNRASTAKEVTDAVTSTTKLAIDFTMDAD-FDEGFMFAIRSK 227
            MEEL+N  MN GENPDDYFNQKHLLR + +KMGE +SDR FKDICV GF+DEYKD K+ V+RD TF+V  M + MRN+FLDEQSRKG KGRIAGRG  MA T+  I C +C+EPGH R++CP++K +   +KKTKP GA KWCS H TTSHSDEECY QG KRPE +  + K FTAC+     S    +  +  EV           +DFT D D FD GFMFA  S+
Sbjct:  156 MEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMLSTMRNIFLDEQSRKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRA--KKKTKPAGATKWCSKHNTTSHSDEECYQQGGKRPEDTKDSNKVFTACSNCTHCSSASKKDDSNNEVA---------VVDFTRDEDAFDSGFMFATCSR 372          
BLAST of mRNA_L-elsbetiae_contig14176.3103.1 vs. uniprot
Match: A0A6H5JZ53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ53_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 9.990e-78
Identity = 131/230 (56.96%), Postives = 162/230 (70.43%), Query Frame = 0
Query:    1 MEELQNTHMNSGENPDDYFNQKHLLRLKAEKMGETVSDRWFKDICVSGFNDEYKDEKMTVYRDSTFDVAQMQTIMRNMFLDEQSRKGSKGRIAGRGIVMAATSEGITCFACHEPGHSRKDCPQVKAKTVTRKKTKPKGAAKWCSIHYTTSHSDEECY--VQGAKRPERSGATAKAFTACTQXXXXSGTPNRASTAKEVTDAVTSTTKLAIDFTMDAD-FDEGFMFAIRSK 227
            MEEL+N  MN GENPDDYFNQKH L ++ +KMGE +SDR FKDICV GF+DEY+D K+ ++RD TF+V  MQ+ MRN++LDEQSRKG KGRIAGRG  MA T+  I C +C+EPGH R++CP++K +   +KKTKP GA KWCS H TTSHSDEECY   QG K PE +  ++KAFT C+     S T N+  +  EVT          +DFT D D FD GFMFA  S+
Sbjct:    1 MEELENNPMNPGENPDDYFNQKHPLCVQLDKMGEPISDRRFKDICVQGFSDEYEDVKLMLFRDPTFNVLDMQSTMRNIYLDEQSRKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRA--KKKTKPAGATKWCSKHNTTSHSDEECYQQXQGGKCPEDTKDSSKAFTPCSDCTHCSSTCNKHDSNNEVT---------VVDFTRDEDAFDSGFMFATCSR 219          
BLAST of mRNA_L-elsbetiae_contig14176.3103.1 vs. uniprot
Match: A0A6H5JKH7_9PHAE (gag_pre-integrs domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKH7_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 1.050e-75
Identity = 135/228 (59.21%), Postives = 160/228 (70.18%), Query Frame = 0
Query:    1 MEELQNTHMNSGENPDDYFNQKHLLRLKAEKMGETVSDRWFKDICVSGFNDEYKDEKMTVYRDSTFDVAQMQTIMRNMFLDEQSRKGSKGRIAGRGIVMAATSEGITCFACHEPGHSRKDCPQVKAKTVTRKKTKPKGAAKWCSIHYTTSHSDEECYVQGAKRPERSGATAKAFTACTQXXXXSGTPNRASTAKEVTDAVTSTTKLAIDFTMDAD-FDEGFMFAIRSK 227
            MEEL+N  MN GENPDDYFNQKHLLR + +KMGE +SDR FKDICV GF+DEYKD K+ V+RD TF V  MQ+ MRN+FLDEQSRKG KGRIAGRG  MA T+  I C+   EPGH R++CP++K +   +KKTKP GA KWCS H TTSHSDEECY QG KRPE +  ++KAFTAC+   XX     +  +  EV           +DFT D D FD GFMFA  S+
Sbjct:    1 MEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFSVLDMQSTMRNIFLDEQSRKGWKGRIAGRGFAMATTASDIICY---EPGHIRRNCPKIKNRA--KKKTKPAGATKWCSKHNTTSHSDEECYQQGGKRPEDTKDSSKAFTACSDCTXXXXXXXKNDSNNEVA---------VVDFTRDEDAFDSGFMFATCSR 214          
BLAST of mRNA_L-elsbetiae_contig14176.3103.1 vs. uniprot
Match: A0A6H5KXR7_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR7_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 2.400e-75
Identity = 127/229 (55.46%), Postives = 157/229 (68.56%), Query Frame = 0
Query:    1 MEELQNTHMNSGENPDDYFNQKHLLRLKAEKMGETVSDRWFKDICVSGFNDEYKDEKMTVYRDSTFDVAQMQTIMRNM-FLDEQSRKGSKGRIAGRGIVMAATSEGITCFACHEPGHSRKDCPQVKAKTVTRKKTKPKGAAKWCSIHYTTSHSDEECYVQGAKRPERSGATAKAFTACTQXXXXSGTPNRASTAKEVTDAVTSTTKLAIDFTMDAD-FDEGFMFAIRSK 227
            MEEL+N  MN GENPDDYFNQKHL+R + +KMGE +SDR  KDI V GF+DEY+D K+ V+RD TF+   MQ+ +RN  + +EQSRKG KGRIAGRG  MA T+  I C +C+EPGH R++CP++K +   +KKTKP GA KWC  H TTSHSDEECY QG KRPE +  ++KAFTAC+     S  PN+  +  EV  A         DFT D D FD GFMF   S+
Sbjct:   96 MEELENNPMNPGENPDDYFNQKHLIRAQLDKMGEPISDRRCKDIWVQGFSDEYRDVKLMVFRDPTFNALGMQSTIRNTSWTNEQSRKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRA--KKKTKPAGATKWCCKHNTTSHSDEECYQQGGKRPEDTKDSSKAFTACSDCTHCSSAPNKNDSNNEVAVA---------DFTRDEDAFDSGFMFGTCSR 313          
BLAST of mRNA_L-elsbetiae_contig14176.3103.1 vs. uniprot
Match: A0A6H5KN28_9PHAE (Uncharacterized protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN28_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 5.190e-74
Identity = 131/236 (55.51%), Postives = 161/236 (68.22%), Query Frame = 0
Query:    1 MEELQNTHMNSGENPDDYFNQKHLLRLKAEKMGETVSDRWFKDICVSGFNDEYKDEKMTVYRDSTFDVAQMQTIMRNMFLDEQSRKGSKGRIAGRGIVMAATSEGITCFACHEPGHSRKDCPQVKAKTVTRKKTKPKGAAKWCSIHYTTSHSDEECYVQGAKRPERSGATAKAFTACT-------QXXXXSGTPNRASTAKEVTDAVTSTTKLAIDFTMDAD-FDEGFMF-AIRSK 227
            +++L+ T M  GENPDD+FN+KH LR + EKMGET+SDR FKDICV GF+++YKD KM V+RD +FDV QMQ  MRN+FLDEQ RK +KG+IAGRG  MA  + G  CF C+EPGH R++CP  + +    KKTKP GA KWCS+H TT+HSDEECY QGAKRPER+G   KAF+ACT       Q       P +  T KE       T K  +DF+ D D F  GFM+ AI SK
Sbjct:  136 LDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPERTG---KAFSACTHXXXXXTQSRDTHAKPTKRETPKETE----KTEKAEVDFSYDEDTFKGGFMYHAICSK 364          
BLAST of mRNA_L-elsbetiae_contig14176.3103.1 vs. uniprot
Match: A0A6H5KZM5_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZM5_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 6.020e-74
Identity = 112/165 (67.88%), Postives = 131/165 (79.39%), Query Frame = 0
Query:    1 MEELQNTHMNSGENPDDYFNQKHLLRLKAEKMGETVSDRWFKDICVSGFNDEYKDEKMTVYRDSTFDVAQMQTIMRNMFLDEQSRKGSKGRIAGRGIVMAATSEGITCFACHEPGHSRKDCPQVKAKTVTRKKTKPKGAAKWCSIHYTTSHSDEECYVQGAKRPE 165
            MEEL+N  MN GENPDDYFNQKHLLR + +KMGE +SDR FKDICV GF+DEYKD K+ V+RD TF+V  MQ+ MRN+FLDEQSRK  KGRIAGRG  MA T+  I C +C+EPGH R++CP++K +   +KKTKP GA KWCS H TTSHSDEECY QG KRPE
Sbjct:    1 MEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRKEWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRA--KKKTKPAGATKWCSKHNTTSHSDEECYQQGGKRPE 163          
BLAST of mRNA_L-elsbetiae_contig14176.3103.1 vs. uniprot
Match: D7G6Q1_ECTSI (CCHC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Q1_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 2.190e-73
Identity = 132/228 (57.89%), Postives = 155/228 (67.98%), Query Frame = 0
Query:    1 MEELQNTHMNSGENPDDYFNQKHLLRLKAEKMGETVSDRWFKDICVSGFNDEYKDEKMTVYRDSTFDVAQMQTIMRNMFLDEQSRKGSKGRIAGRGIVMAAT-SEGITCFACHEPGHSRKDCPQVKAKTVTRKKTKPKGAAKWCSIHYTTSHSDEECYVQGAKRPERSG-ATAKAFTACTQXXXXSGTPNRA--STAKEVTDAVTSTTKLAIDFTMDAD-FDEGFMFA 223
            ME+L NT M  G+NPDDYFN KHLLR K EKMGE +SDR+FKD+CV+GF  EYK+ KM ++RD  F+V  MQT M +M LDEQSRKGSKG IAGRG  M  T SE  TCF C E GH R++C Q + K   RK TKP GA KWC  H+TT +SDEECY QGAKRP     +T KAF+AC      S T +R   +TAKE      S+TK AID + D D  DEGFM+A
Sbjct:    1 MEKLDNTSMEPGQNPDDYFNHKHLLRHKVEKMGEKISDRYFKDMCVTGFTHEYKNVKMIMHRDPNFNVNHMQTTMHHMALDEQSRKGSKGGIAGRGFPMVTTASEQETCFGCGEKGHIRRNCLQRRGKGRQRK-TKPAGATKWCCFHFTTKNSDEECYGQGAKRPITDQISTDKAFSACAHCAHFSSTSDRKELTTAKEA-----SSTKAAIDSSTDGDESDEGFMYA 222          
BLAST of mRNA_L-elsbetiae_contig14176.3103.1 vs. uniprot
Match: A0A6H5KJB9_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB9_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 4.060e-73
Identity = 129/227 (56.83%), Postives = 160/227 (70.48%), Query Frame = 0
Query:    1 MEELQNTHMNSGENPDDYFNQKHLLRLKAEKMGETVSDRWFKDICVSGFNDEYKDEKMTVYRDSTFDVAQMQTIMRNMFLDEQSRKGSKGRIAGRGIVMAATSEGITCFACHEPGHSRKDCPQVKAKTVTRKKTKPKGAAKWCSIHYTTSHSDEECYVQGAKRPERSGATAKAFTACTQXXXXSGTPNRASTAKEVTDAVTSTT----KLAIDFTMDAD-FDEGFMF 222
            +++L+ T M  GENPDD+FN+KH LR + EKMGET+SDR FKDICV GF+++YKD KM V+RD +FDV QMQ  MRN+FLDEQ RK +KG+IAGRG  MA  + G  CF C+EPGH R++CP  + +    KKTKP GA KWCS+H TT+HSDEECY QGAKRPER+G   KAF+ACT     S T +R + AK  T    + T    K  IDF+ D D F  GFM+
Sbjct:  136 LDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPERTG---KAFSACTHCVHCS-TQSRDTHAKPTTTETPTETEKTEKAEIDFSYDEDAFKGGFMY 358          
BLAST of mRNA_L-elsbetiae_contig14176.3103.1 vs. uniprot
Match: A0A6H5KW66_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW66_9PHAE)

HSP 1 Score: 246 bits (629), Expect = 7.010e-73
Identity = 131/232 (56.47%), Postives = 161/232 (69.40%), Query Frame = 0
Query:    1 MEELQNTHMNSGENPDDYFNQKHLLRLKAEKMGETVSDRWFKDICVSGFNDEYKDEKMTVYRDSTFDVAQMQTIMRNMFLDEQSRKGSKGRIAGRGIVMAAT-SEGITCFACHEPGHSRKDCPQVKAKTVTRKKTKPKGAAKWCSIHYTTSHSDEECYVQGAKRPERSGATAKAFTACTQXXXXSGTPNRASTAKEVTDAVTSTTKLAIDFTMDADFDEGFMFAIRSKWKRL 231
            MEEL NT M   +NPDDYFNQKHLLR KAEKMGET+SD +F D CV+GF +EYKD KM +YRD  F+V +MQT MR+MFLDEQSR G KG IAGRG  M AT SE  TCF C E GH  ++C + + K   +KKTKP GAAKWCS+H+TT HSDEEC+ QGA RP++S  T KA +AC        T N+   A    +A  S+T+  IDF+ + + +EGFM+AI  K + L
Sbjct:  116 MEELINTPMEPRQNPDDYFNQKHLLRHKAEKMGETISDCYFNDECVTGFTNEYKDVKMIMYRDPDFNVDKMQTTMRHMFLDEQSRNGPKGSIAGRGFAMTATTSEEPTCFDCGEKGHIWRNCSEKRGKG--KKKTKPAGAAKWCSVHFTTRHSDEECFEQGATRPKKSSNTGKALSACASCTHCFSTSNKTELAMTKQEA--SSTQAEIDFSAEGESEEGFMYAIVHKGEDL 343          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14176.3103.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JF66_9PHAE7.890e-8458.72CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5L580_9PHAE5.200e-7958.33CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JZ53_9PHAE9.990e-7856.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JKH7_9PHAE1.050e-7559.21gag_pre-integrs domain-containing protein n=1 Tax=... [more]
A0A6H5KXR7_9PHAE2.400e-7555.46CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KN28_9PHAE5.190e-7455.51Uncharacterized protein (Fragment) n=3 Tax=Ectocar... [more]
A0A6H5KZM5_9PHAE6.020e-7467.88CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G6Q1_ECTSI2.190e-7357.89CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KJB9_9PHAE4.060e-7356.83Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
A0A6H5KW66_9PHAE7.010e-7356.47CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 107..123
e-value: 0.0028
score: 26.9
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 108..123
score: 9.735
NoneNo IPR availableGENE3D4.10.60.10coord: 101..141
e-value: 1.8E-6
score: 30.0
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 104..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14176contigL-elsbetiae_contig14176:3532..4287 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14176.3103.1mRNA_L-elsbetiae_contig14176.3103.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14176 3532..4300 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14176.3103.1 ID=prot_L-elsbetiae_contig14176.3103.1|Name=mRNA_L-elsbetiae_contig14176.3103.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=252bp
MEELQNTHMNSGENPDDYFNQKHLLRLKAEKMGETVSDRWFKDICVSGFN
DEYKDEKMTVYRDSTFDVAQMQTIMRNMFLDEQSRKGSKGRIAGRGIVMA
ATSEGITCFACHEPGHSRKDCPQVKAKTVTRKKTKPKGAAKWCSIHYTTS
HSDEECYVQGAKRPERSGATAKAFTACTQCTHCSGTPNRASTAKEVTDAV
TSTTKLAIDFTMDADFDEGFMFAIRSKWKRLHSQPNRSYATDRHRRHGNH
D*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf