prot_L-elsbetiae_contig1415.3088.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1415.3088.1
Unique Nameprot_L-elsbetiae_contig1415.3088.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length384
Homology
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BLAST of mRNA_L-elsbetiae_contig1415.3088.1 vs. uniprot
Match: A0A6H5J884_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J884_9PHAE)

HSP 1 Score: 571 bits (1471), Expect = 2.430e-202
Identity = 306/387 (79.07%), Postives = 343/387 (88.63%), Query Frame = 0 
Query:    1 MASRRLSSAVASHASALATFAIAASAMLRIPTN--CSNSTEPAGDRRGNPRRKRERSEQEEEQPVNPCAEYNTLKWRMSYASRKDDCNSEDSCVFIGRSITGACAPRDPSILHKRRSLPKVPLVLPDSHGSSKQRNAVLQRQHTARVMSDTIDELESEFEEEG-EDYFDSTMAANKFKELMSALDVEESTQELAVAILKEEGLQAVQVFVKSQLANAAAEELRYQKSATKAFAKDFLIKVMRDPELPGQMGHMLESVFKDPALSTGIRHLIYNAVGLDHTYQSSLTLTTPLIRWLLSETGWMDEEAAKLCAYLVRLEQTELATIWLAAWAIREPGMLDPAASRGLAASLPLGSQQMTDAMVWALSETLQSDWALEMAKSVTVEMIRS 384
            MA  RL   +AS+ASALA+  + ASA+    T+  CSNS +    RRGN RR RERSE+E E PVNPCAE+NTLKWRMSYA RK+DCN EDSCVF+GRS+TGAC PRDPSILHKRRS P VPLVLPDS GS+K+  A LQRQHTA+VMS+TIDELESEFE +G E Y D+ +AANKF+ELMSALDVEESTQELA+AIL+EEG+ AVQVFVKSQLANAAAEELRYQKSAT+AFAKDFL++V+R+PELPGQMGHMLESVFKDPALSTGIRHLIYNAVGLD+TYQSSLTLT PLIRWLLSET WMD EAAKLCAYLVRLEQTELATI L AWAIREPG+LDP++SRGLAASLPLGSQQ+TD+MVWAL+ETL+SDWALEMAKS TVEMI+S
Sbjct:    1 MAGSRLCCTLASNASALASCTVVASAVQSSLTSLSCSNSEDGGSRRRGNNRRVRERSEEEAE-PVNPCAEFNTLKWRMSYAHRKNDCNGEDSCVFVGRSVTGACVPRDPSILHKRRSFPNVPLVLPDSDGSTKKLQAALQRQHTAKVMSETIDELESEFEHKGVEPYSDTKLAANKFRELMSALDVEESTQELALAILQEEGMHAVQVFVKSQLANAAAEELRYQKSATEAFAKDFLMEVIREPELPGQMGHMLESVFKDPALSTGIRHLIYNAVGLDYTYQSSLTLTIPLIRWLLSETDWMDAEAAKLCAYLVRLEQTELATILLVAWAIREPGILDPSSSRGLAASLPLGSQQITDSMVWALTETLKSDWALEMAKSTTVEMIKS 386
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1415.3088.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J884_9PHAE2.430e-20279.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..384
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1415contigL-elsbetiae_contig1415:3696..17994 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1415.3088.1mRNA_L-elsbetiae_contig1415.3088.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1415 3696..17994 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1415.3088.1 ID=prot_L-elsbetiae_contig1415.3088.1|Name=mRNA_L-elsbetiae_contig1415.3088.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=384bp
MASRRLSSAVASHASALATFAIAASAMLRIPTNCSNSTEPAGDRRGNPRR
KRERSEQEEEQPVNPCAEYNTLKWRMSYASRKDDCNSEDSCVFIGRSITG
ACAPRDPSILHKRRSLPKVPLVLPDSHGSSKQRNAVLQRQHTARVMSDTI
DELESEFEEEGEDYFDSTMAANKFKELMSALDVEESTQELAVAILKEEGL
QAVQVFVKSQLANAAAEELRYQKSATKAFAKDFLIKVMRDPELPGQMGHM
LESVFKDPALSTGIRHLIYNAVGLDHTYQSSLTLTTPLIRWLLSETGWMD
EEAAKLCAYLVRLEQTELATIWLAAWAIREPGMLDPAASRGLAASLPLGS
QQMTDAMVWALSETLQSDWALEMAKSVTVEMIRS
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