prot_L-elsbetiae_contig1413.3079.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1413.3079.1
Unique Nameprot_L-elsbetiae_contig1413.3079.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length122
Homology
BLAST of mRNA_L-elsbetiae_contig1413.3079.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 3.800e-59
Identity = 103/123 (83.74%), Postives = 108/123 (87.80%), Query Frame = 0
Query:    1 SGLESALGWWEDVERFGEGKSNRLKMVLVGLAEAGKTTIVRHFTGQPVPKGPDRTVGIEIT-DWRPLDEARLQVSVWDFAGQAGYYSSHQLFLTKGALFLLVVDLHAFSKEVQSVVGNFTDPR 122
            SG E ALGWWEDV+RFGEGKSN+LKMVLVGLA AGKTTIVRH TG+ VPK  DRTVGIEIT DW+P DE  LQVSVWDFAGQA YYSSHQLFLTKGALFLLVVDLHAFSKE+ S V NFTDPR
Sbjct:  260 SGFERALGWWEDVKRFGEGKSNKLKMVLVGLAGAGKTTIVRHMTGRSVPKRSDRTVGIEITTDWKPGDEVPLQVSVWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKEIGSGVDNFTDPR 382          
BLAST of mRNA_L-elsbetiae_contig1413.3079.1 vs. uniprot
Match: D8LK68_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK68_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 9.640e-37
Identity = 71/122 (58.20%), Postives = 91/122 (74.59%), Query Frame = 0
Query:    2 GLESALGWWEDVERFGEGKSNRLKMVLVGLAEAGKTTIVRHFTG-QPVPKGPDRTVGIEITDWRPLDEARLQVSVWDFAGQAGYYSSHQLFLTKGALFLLVVDLHAFSKEVQSVVGNFTDPR 122
            GL SA  WW+ + RFGEG S++LKMVLVGLAEAGKTTIVRHFTG  P  K   RT+G+E+++W+P     L VS+WDF+GQ+ Y++SHQ+FLT+GALFLLVVDL    ++ +S      DPR
Sbjct:  406 GLVSAGRWWDGIARFGEGTSSKLKMVLVGLAEAGKTTIVRHFTGGDPADK---RTIGVELSEWKPNKNLPLAVSLWDFSGQSDYHASHQIFLTEGALFLLVVDLFELGRDEKS--AGIPDPR 522          
BLAST of mRNA_L-elsbetiae_contig1413.3079.1 vs. uniprot
Match: A0A6H5JSN1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN1_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 4.970e-25
Identity = 60/125 (48.00%), Postives = 79/125 (63.20%), Query Frame = 0
Query:    2 GLESALGWWEDVERFGEGKSNRLKMVLVGLAEAGKTTIVRHFTG----QPVPKGPDRTVGIEITDWR----PLD-----EARLQVSVWDFAGQAGYYSSHQLFLTKGALFLLVVDLHAFSKEVQS 113
            GL  A  + +D+E FG   SNRLK+VLVGL  AGKT++     G    +P+P   +RTVG+EI D R    P +      A L V +WDFAGQ  YY +HQ+FLT GALF+LVVD+ A+S++  S
Sbjct:   26 GLAYAASFLKDLEDFGRTSSNRLKVVLVGLGNAGKTSVAVRLEGLAPSKPLPSAKERTVGVEIRDIRLGSGPANARSGGNAELDVKLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFAYSEDGHS 150          
BLAST of mRNA_L-elsbetiae_contig1413.3079.1 vs. uniprot
Match: A0A6H5JPJ1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ1_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 3.890e-23
Identity = 57/125 (45.60%), Postives = 78/125 (62.40%), Query Frame = 0
Query:    2 GLESALGWWEDVERFGEGKSNRLKMVLVGLAEAGKTTIVRHFTG----QPVPKGPDRTVGIEITDWR----PLD-----EARLQVSVWDFAGQAGYYSSHQLFLTKGALFLLVVDLHAFSKEVQS 113
            G+  A  + +D+  FG   SNRLK+VLVGL  AGKT++     G    +P+P   +RTVG+EI D +    P +      A L V +WDFAGQ  YY +HQ+FLT GALF+LVVD+ A+S++  S
Sbjct:  198 GMAYAARFLKDLNDFGRTSSNRLKVVLVGLGNAGKTSVAVRLEGLASSKPLPTAEERTVGVEIRDIQLAPGPANGGSRGNAELDVKLWDFAGQRAYYDTHQMFLTPGALFVLVVDIFAYSEDGHS 322          
BLAST of mRNA_L-elsbetiae_contig1413.3079.1 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 1.840e-22
Identity = 56/120 (46.67%), Postives = 75/120 (62.50%), Query Frame = 0
Query:    2 GLESALGWWEDVERFGEGKSNRLKMVLVGLAEAGKTTIVRHFT---GQPVPKGPDRTVGIEITDWR----PLDEA-----RLQVSVWDFAGQAGYYSSHQLFLTKGALFLLVVDLHAFSK 109
            G+  A  +  D++ +G   SNRLK+VLVGL EAGKT+I        G   PK  +RTVG+EI D +    P +E       L VS+WDFAGQ  YY +HQ+FLT GALF+LVVD+  +++
Sbjct:  334 GMAHAAVFLRDLDDYGRAWSNRLKVVLVGLGEAGKTSIATRLEDRLGSSCPKPEERTVGVEIRDIKLGPGPTNEGSGPNVELDVSLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFTYTE 453          
BLAST of mRNA_L-elsbetiae_contig1413.3079.1 vs. uniprot
Match: A0A6H5L2L4_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L4_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 4.050e-21
Identity = 54/118 (45.76%), Postives = 73/118 (61.86%), Query Frame = 0
Query:    2 GLESALGWWEDVERFGEGKSNRLKMVLVGLAEAGKTTIVRHFTGQ---PVPKGPDRTVGIEITDWR----PLDEA-----RLQVSVWDFAGQAGYYSSHQLFLTKGALFLLVVDLHAF 107
            G+     + +D++ +G    NRLK+VLVGL EAGKT+I     G+     PK  +RTVG+EI D +    P +E       L VS+WDFAGQ  YY +HQ+FLT GALF+LVVD+  +
Sbjct:   79 GMAHTAVFLKDLDDYGRAWYNRLKVVLVGLGEAGKTSIATRLEGRLGSSCPKPEERTVGVEIRDIKLGPGPTNEGIGPNDELDVSLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFTY 196          
BLAST of mRNA_L-elsbetiae_contig1413.3079.1 vs. uniprot
Match: A0A6H5K9A9_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A9_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 1.680e-19
Identity = 53/120 (44.17%), Postives = 71/120 (59.17%), Query Frame = 0
Query:    2 GLESALGWWEDVERFGEGKSNRLKMVLVGLAEAGKTTIVRHFT---GQPVPKGPDRTVGIEI---------TDWRPLDEARLQVSVWDFAGQAGYYSSHQLFLTKGALFLLVVDLHAFSK 109
            G+  A  +  D++ +G   SNRLK+VLVGL  AGKT+I        G   P   +RTVG+EI         T         L VS+WDFAGQ  YY +HQ+FLT+GALF+LVVD+ A+++
Sbjct:   39 GMAYAAVFLRDLDDYGRAWSNRLKVVLVGLGGAGKTSIATRLEDRLGGCCPNPEERTVGVEIRNIKLGPGATSEGSGPNVELDVSLWDFAGQRAYYDTHQMFLTQGALFVLVVDMFAYAE 158          
BLAST of mRNA_L-elsbetiae_contig1413.3079.1 vs. uniprot
Match: D8LLG1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 8.020e-19
Identity = 56/119 (47.06%), Postives = 69/119 (57.98%), Query Frame = 0
Query:    8 GWWEDVERFGEGKSNR-------LKMVLVGLAEAGKTTIVRHFT-GQPVPKGPDRTVGIE--ITDWRPLDEARLQVSVWDFAGQAGYYSSHQLFLTKGALFLLVVDLHAFSKEVQSVVG 116
            G W+ V  F EG S         LK+VLVG   AGKTT+ R    G+     P RT GI+  I  W P  +  L+V +WDFAG   Y+S+HQ+FLT GAL LLVVDLH F ++V S  G
Sbjct:  165 GGWDQVVSFHEGLSQSGGQVVPSLKVVLVGAVGAGKTTLARGLLDGKIAQTLPPRTRGIDVHIQPWVPDFDPPLEVLIWDFAGHDDYHSTHQMFLTDGALHLLVVDLHKFDRDVLSRGG 283          
BLAST of mRNA_L-elsbetiae_contig1413.3079.1 vs. uniprot
Match: A0A822BCY3_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A822BCY3_9BILA)

HSP 1 Score: 77.0 bits (188), Expect = 2.120e-14
Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = 0
Query:   23 RLKMVLVGLAEAGKTTIVRHFTGQPVPKGPDRTVGIEITDWR-PLDEAR--LQVSVWDFAGQAGYYSSHQLFLTKGALFLLV 101
            R K++LVGL  AGKT++VR F      K P+ T GI+I  W+ PL++    L+ SVWDFAGQ+ YY +HQ FL K A+++LV
Sbjct:  130 RTKLMLVGLGGAGKTSLVRAFLKSHSDKPPEITDGIDIVKWKVPLNQPDDFLEFSVWDFAGQSVYYHTHQFFLAKKAVYVLV 211          
BLAST of mRNA_L-elsbetiae_contig1413.3079.1 vs. uniprot
Match: A0A818UFR4_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818UFR4_9BILA)

HSP 1 Score: 77.0 bits (188), Expect = 5.050e-14
Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = 0
Query:   23 RLKMVLVGLAEAGKTTIVRHFTGQPVPKGPDRTVGIEITDWR-PLDEAR--LQVSVWDFAGQAGYYSSHQLFLTKGALFLLV 101
            R K++LVGL  AGKT++VR F      K P+ T GI+I  W+ PL++    L+ SVWDFAGQ+ YY +HQ FL K A+++LV
Sbjct:  112 RTKLMLVGLGGAGKTSLVRAFLKSHSDKPPEITDGIDIVKWKVPLNQPDDFLEFSVWDFAGQSVYYHTHQFFLAKKAVYVLV 193          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1413.3079.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKS5_ECTSI3.800e-5983.74LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LK68_ECTSI9.640e-3758.20LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JSN1_9PHAE4.970e-2548.00Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPJ1_9PHAE3.890e-2345.60Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FU35_ECTSI1.840e-2246.67LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5L2L4_9PHAE4.050e-2145.76Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K9A9_9PHAE1.680e-1944.17Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LLG1_ECTSI8.020e-1947.06LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A822BCY3_9BILA2.120e-1450.00Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 ... [more]
A0A818UFR4_9BILA5.050e-1450.00Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 24..45
score: 31.86
coord: 64..86
score: 28.16
NoneNo IPR availableGENE3D3.40.50.300coord: 23..119
e-value: 4.8E-20
score: 73.7
NoneNo IPR availablePFAMPF08477Roccoord: 25..111
e-value: 1.3E-16
score: 60.8
IPR020859Roc domainPROSITEPS51424ROCcoord: 17..122
score: 22.371
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 21..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1413contigL-elsbetiae_contig1413:5518..5883 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1413.3079.1mRNA_L-elsbetiae_contig1413.3079.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1413 5518..5883 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1413.3079.1 ID=prot_L-elsbetiae_contig1413.3079.1|Name=mRNA_L-elsbetiae_contig1413.3079.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=122bp
SGLESALGWWEDVERFGEGKSNRLKMVLVGLAEAGKTTIVRHFTGQPVPK
GPDRTVGIEITDWRPLDEARLQVSVWDFAGQAGYYSSHQLFLTKGALFLL
VVDLHAFSKEVQSVVGNFTDPR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020859ROC_dom
IPR027417P-loop_NTPase