prot_L-elsbetiae_contig14066.3032.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14066.3032.1
Unique Nameprot_L-elsbetiae_contig14066.3032.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length195
Homology
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BLAST of mRNA_L-elsbetiae_contig14066.3032.1 vs. uniprot
Match: A0A6H5KT26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT26_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 1.520e-33
Identity = 101/214 (47.20%), Postives = 117/214 (54.67%), Query Frame = 0 
Query:    1 MTPLAREVALASLPCLSAAGPEPIRSRAEALFRRLSFLDGDGVWLLLMQTLDNASQQPNPPQR--------------------ASLGXXXXXXXXXXXRSRAGKRVAAPGVVAAATPRGAGPRSLAVGNREXXXXXXXXXXXXXXXLPKVLPPVPSVPEGTASVVGVGGGRPAALLESRAVFSGSAGRVAGECAPAAARLLGVLGAGGAVAEHM 194
            MTPLAREVA+A+LPCLS+AG   I SRAEALFRRL+FLDGDGVWLLLMQT+D A+QQ  P Q                     AS+            R  +G  VA+P  VAA     AG  S   G+                 LP       +V    ++V    G RPAALLE R+VFSG AGRVA ECAPAA+RLLG+LG  G V EHM
Sbjct: 1547 MTPLAREVAIAALPCLSSAGATSILSRAEALFRRLAFLDGDGVWLLLMQTMDTATQQRCPQQXXXXXXXXYSRRNHHQHLQHCASVDGQRGDVTSDGGRGASGW-VASPPTVAARLRSDAGGSSAGTGDAGCSSSQGGSGDGTSSRLPGCPTLEDTVLSELSAVGATTGRRPAALLERRSVFSGGAGRVAVECAPAASRLLGMLGDHGGVVEHM 1759
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14066.3032.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KT26_9PHAE1.520e-3347.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..194
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14066contigL-elsbetiae_contig14066:1893..3534 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14066.3032.1mRNA_L-elsbetiae_contig14066.3032.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14066 1768..4148 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14066.3032.1 ID=prot_L-elsbetiae_contig14066.3032.1|Name=mRNA_L-elsbetiae_contig14066.3032.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=195bp
MTPLAREVALASLPCLSAAGPEPIRSRAEALFRRLSFLDGDGVWLLLMQT
LDNASQQPNPPQRASLGGGGAPATAGGGRSRAGKRVAAPGVVAAATPRGA
GPRSLAVGNREESSSGGVGGSGAWWWLPKVLPPVPSVPEGTASVVGVGGG
RPAALLESRAVFSGSAGRVAGECAPAAARLLGVLGAGGAVAEHM*
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