prot_L-elsbetiae_contig1406.3029.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1406.3029.1
Unique Nameprot_L-elsbetiae_contig1406.3029.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length291
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1406.3029.1 vs. uniprot
Match: D8LL54_ECTSI (B box-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL54_ECTSI)

HSP 1 Score: 344 bits (883), Expect = 3.850e-110
Identity = 188/253 (74.31%), Postives = 214/253 (84.58%), Query Frame = 0 
Query:    2 DQVARAGKQRLMIDLEQESLLETETARLSREKVHAFKTRTNLDELINAYHIDTQLGAERLGAELASAVAEEGTDEKFTCVSKITSLKNKEESVRRKVQVSLQRGLEEEIAAEDRYLNDETSGFTFAGDVADAPITHFAKIKASLMEPPHHPAHLSFDSWRKVYRAQPWLAAQTQAENKRKLARASTIQTLEEMRAVTAAARSQEAFAAKEVVALKAEIEDFEKRLAFSRSGVAGDATQEPLSNDDRIRMEIAL 254
            DQ++RAGKQRLMIDLEQE+LLE+ETARL +E  HA K R NL EL+ AYHID QLGAER+GAELA+  +EEGTDE+F   +++T LKNKE+SVR KVQ SLQRGLEEEIA+EDRYL +E    T  GDVADAPI HFAKIKASL+EPP HPAH+SF+SWRKVYRAQPWLAAQTQAENKRK ARASTI  LEEMRAV AAA+SQEAFAAKEV +LKAEIE F+KRLAF RSG    A QEPLS+D+RIRME+ +
Sbjct:  491 DQISRAGKQRLMIDLEQENLLESETARLLKENEHASKCRENLQELLKAYHIDAQLGAERVGAELANTASEEGTDERFLWTTRVTRLKNKEQSVRGKVQASLQRGLEEEIASEDRYLTEEV---TITGDVADAPIAHFAKIKASLVEPPRHPAHMSFESWRKVYRAQPWLAAQTQAENKRKAARASTIDGLEEMRAVVAAAKSQEAFAAKEVASLKAEIEAFQKRLAFKRSGAPEGAAQEPLSDDERIRMEVRV 740
[Close]
BLAST of mRNA_L-elsbetiae_contig1406.3029.1 vs. uniprot
Match: A0A6H5L2U6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2U6_9PHAE)

HSP 1 Score: 234 bits (598), Expect = 5.320e-72
Identity = 132/171 (77.19%), Postives = 147/171 (85.96%), Query Frame = 0 
Query:  121 TSGFTFAGDVADAPITHFAKIKASLMEPPHHPAHLSFDSWRKVYRAQPWLAAQTQAENKRKLARASTIQTLEEMRAVTAAARSQEAFAAKEVVALKAEIEDFEKRLAFSRSGVAGDATQEPLSNDDRIRMEIALAKDRDKLVDQEERLERRRKANGNKQKELKKMEEELEA 291
            T   T  GDVADAPI HFAKIKASL+EPP HPAH+SF+SWRKVYRAQPWLAAQTQAENKRK ARASTI+ LEEMRAV AAA+SQEAFAAKEV +LKAE+E F+KRLAF RSG   DA QEPLS+DDRIRMEI LAK ++KL D+EERLERRRKAN +K +ELKK E +LEA
Sbjct:    5 TEEVTITGDVADAPIAHFAKIKASLVEPPRHPAHMSFESWRKVYRAQPWLAAQTQAENKRKAARASTIEGLEEMRAVVAAAKSQEAFAAKEVASLKAEMEAFQKRLAFKRSGAPEDAAQEPLSDDDRIRMEIDLAKTKEKLEDREERLERRRKANSHKNEELKKKEADLEA 175
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1406.3029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LL54_ECTSI3.850e-11074.31B box-type domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5L2U6_9PHAE5.320e-7277.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 205..225
NoneNo IPR availableCOILSCoilCoilcoord: 268..288

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1406contigL-elsbetiae_contig1406:624..6293 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1406.3029.1mRNA_L-elsbetiae_contig1406.3029.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1406 624..11656 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1406.3029.1 ID=prot_L-elsbetiae_contig1406.3029.1|Name=mRNA_L-elsbetiae_contig1406.3029.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=291bp
MDQVARAGKQRLMIDLEQESLLETETARLSREKVHAFKTRTNLDELINAY
HIDTQLGAERLGAELASAVAEEGTDEKFTCVSKITSLKNKEESVRRKVQV
SLQRGLEEEIAAEDRYLNDETSGFTFAGDVADAPITHFAKIKASLMEPPH
HPAHLSFDSWRKVYRAQPWLAAQTQAENKRKLARASTIQTLEEMRAVTAA
ARSQEAFAAKEVVALKAEIEDFEKRLAFSRSGVAGDATQEPLSNDDRIRM
EIALAKDRDKLVDQEERLERRRKANGNKQKELKKMEEELEA
back to top