prot_L-elsbetiae_contig14052.3025.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14052.3025.1
Unique Nameprot_L-elsbetiae_contig14052.3025.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length58
Homology
BLAST of mRNA_L-elsbetiae_contig14052.3025.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 6.090e-20
Identity = 41/58 (70.69%), Postives = 47/58 (81.03%), Query Frame = 0
Query:    1 MAQTDRDALLALYTATDGPNWKNKTNWNTNADLSKWYGVKLNGEGRVAALFLNGNNLR 58
            MA TDRD L+ALY ATDGPNWKNKTNW+TNADLS W+GVK + +GRV  L L+ N LR
Sbjct:    1 MAPTDRDVLVALYNATDGPNWKNKTNWDTNADLSDWHGVKADDQGRVVKLSLSANKLR 58          
BLAST of mRNA_L-elsbetiae_contig14052.3025.1 vs. uniprot
Match: D8LLG1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 7.910e-17
Identity = 39/58 (67.24%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    1 MAQTDRDALLALYTATDGPNWKNKTNWNTNADLSKWYGVKLNGEGRVAALFLNGNNLR 58
            MA TD DAL+ALY ATDG NWK   NW T+ DLS+WYGV+LN +GRVA L L  NNLR
Sbjct:    1 MAATDYDALVALYHATDGANWKQNRNWITDTDLSQWYGVELNDQGRVACLNLYSNNLR 58          
BLAST of mRNA_L-elsbetiae_contig14052.3025.1 vs. uniprot
Match: A0A6H5JX36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX36_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 8.110e-17
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 0
Query:    1 MAQTDRDALLALYTATDGPNWKNKTNWNTNADLSKWYGVKLNGEGRVAALFLNGNNLR 58
            MA TDRDAL+ALY AT+G  W    NWNT A LS+W+GV +N +GRV AL L  NNL+
Sbjct:    1 MASTDRDALVALYNATEGGRWSTNRNWNTGAPLSQWHGVHVNDQGRVVALELAENNLQ 58          
BLAST of mRNA_L-elsbetiae_contig14052.3025.1 vs. uniprot
Match: D8LFJ9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFJ9_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 8.400e-17
Identity = 36/58 (62.07%), Postives = 46/58 (79.31%), Query Frame = 0
Query:    1 MAQTDRDALLALYTATDGPNWKNKTNWNTNADLSKWYGVKLNGEGRVAALFLNGNNLR 58
            MAQTDR+AL+ALYTA  G  W+N  NWNT+A LS+W+GV++N +GRV  LFL  NNL+
Sbjct:   25 MAQTDREALVALYTAIGGAKWRNNRNWNTSAALSQWHGVEVNSQGRVVNLFLWDNNLQ 82          
BLAST of mRNA_L-elsbetiae_contig14052.3025.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 2.750e-16
Identity = 36/58 (62.07%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    1 MAQTDRDALLALYTATDGPNWKNKTNWNTNADLSKWYGVKLNGEGRVAALFLNGNNLR 58
            MA TDRD L+ALY AT+G NW+N  NW T+ADLS+W+GV +N +GRV  L L+ NNLR
Sbjct:    1 MASTDRDVLVALYNATEGANWQNSINWGTDADLSQWFGVTVNHQGRVVRLDLSFNNLR 58          
BLAST of mRNA_L-elsbetiae_contig14052.3025.1 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 2.780e-16
Identity = 35/57 (61.40%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    1 MAQTDRDALLALYTATDGPNWKNKTNWNTNADLSKWYGVKLNGEGRVAALFLNGNNL 57
            MAQTDRDAL+ALY AT G NW+   NW+T+ADL  W+GV +N +GRV  L L  NNL
Sbjct:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNL 57          
BLAST of mRNA_L-elsbetiae_contig14052.3025.1 vs. uniprot
Match: D8LL09_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL09_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 6.050e-16
Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    1 MAQTDRDALLALYTATDGPNWKNKTNWNTNADLSKWYGVKLNGEGRVAALFLNGNNLR 58
            M QTDRDAL+ALY A  G NWKN  NWN +ADLSKW+G+ +N +GRV  + L  NNL+
Sbjct:   51 MPQTDRDALVALYDAAGGFNWKNNGNWNADADLSKWHGININDQGRVVEVHLAANNLQ 108          
BLAST of mRNA_L-elsbetiae_contig14052.3025.1 vs. uniprot
Match: D8LFK2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK2_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 2.720e-15
Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    1 MAQTDRDALLALYTATDGPNWKNKTNWNTNADLSKWYGVKLNGEGRVAALFLNGNNLR 58
            MAQTDR AL+ALY AT G  WKN  NW T+A LS+W+GV++N +GRV  L L  NNLR
Sbjct:   71 MAQTDRKALVALYNATGGAEWKNNQNWTTSAALSQWHGVEVNTQGRVVKLSLGWNNLR 128          
BLAST of mRNA_L-elsbetiae_contig14052.3025.1 vs. uniprot
Match: A0A6H5K3C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3C2_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 4.310e-15
Identity = 32/57 (56.14%), Postives = 40/57 (70.18%), Query Frame = 0
Query:    1 MAQTDRDALLALYTATDGPNWKNKTNWNTNADLSKWYGVKLNGEGRVAALFLNGNNL 57
            MAQTDRDAL+A+Y AT G  W    NW+T++DL  W+GV +N +GRV  L L  NNL
Sbjct:    1 MAQTDRDALVAMYRATGGEKWSTSQNWDTDSDLKTWHGVNVNDQGRVVKLELGFNNL 57          
BLAST of mRNA_L-elsbetiae_contig14052.3025.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 8.500e-15
Identity = 34/57 (59.65%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    1 MAQTDRDALLALYTATDGPNWKNKTNWNTNADLSKWYGVKLNGEGRVAALFLNGNNL 57
            MAQTDRDAL+ LY AT G NW+ + NW+T+ADL  W+GV +N +GRV  L L  NNL
Sbjct:    1 MAQTDRDALVVLYRATGGENWRERQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNL 57          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14052.3025.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKS5_ECTSI6.090e-2070.69LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LLG1_ECTSI7.910e-1767.24LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JX36_9PHAE8.110e-1760.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFJ9_ECTSI8.400e-1762.07Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7FJV1_ECTSI2.750e-1662.07LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JK91_9PHAE2.780e-1661.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL09_ECTSI6.050e-1660.34Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D8LFK2_ECTSI2.720e-1562.07Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5K3C2_9PHAE4.310e-1556.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBY3_ECTSI8.500e-1559.65Hypothetical leucine rich repeat protein n=1 Tax=E... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..58
e-value: 6.2E-17
score: 63.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14052contigL-elsbetiae_contig14052:2969..3142 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14052.3025.1mRNA_L-elsbetiae_contig14052.3025.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14052 2316..3142 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14052.3025.1 ID=prot_L-elsbetiae_contig14052.3025.1|Name=mRNA_L-elsbetiae_contig14052.3025.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=58bp
MAQTDRDALLALYTATDGPNWKNKTNWNTNADLSKWYGVKLNGEGRVAAL
FLNGNNLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf