prot_L-elsbetiae_contig14029.3009.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14029.3009.1
Unique Nameprot_L-elsbetiae_contig14029.3009.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length232
Homology
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BLAST of mRNA_L-elsbetiae_contig14029.3009.1 vs. uniprot
Match: D7FTG6_ECTSI (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTG6_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 1.090e-13
Identity = 47/86 (54.65%), Postives = 60/86 (69.77%), Query Frame = 0 
Query:  123 MGGASSRSGGGSKG------YDVVDREEPLLGDDGRGDGAGVGEVKRPRDESVSAGLLWNAGESPSLRSGGDASLGPAFGRHGRTG 202
            MGGASSR+G G         Y+VV+REEPLL + G          +   DES++AGLLW+AG++PSLR GGD+SLGPAFG+HGR+G
Sbjct:    1 MGGASSRNGRGGGADXXXXXYEVVEREEPLLREGG---------PEEQNDESMAAGLLWSAGDNPSLRLGGDSSLGPAFGQHGRSG 77
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14029.3009.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTG6_ECTSI1.090e-1354.65MFS domain-containing protein n=2 Tax=Ectocarpus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14029contigL-elsbetiae_contig14029:643..2356 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14029.3009.1mRNA_L-elsbetiae_contig14029.3009.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14029 643..2356 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14029.3009.1 ID=prot_L-elsbetiae_contig14029.3009.1|Name=mRNA_L-elsbetiae_contig14029.3009.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=232bp
AVTNGNGTTNGSITTNGSSGSTNGSSSSGGSTYNGTSPPLSPPPKASSKK
SPPPPPARPAVNGSSGNGYSSPAPSFPSSSRHQRPRRDPQEDPGLELTRE
PWRQQGTAGPDWESNEGESGVAMGGASSRSGGGSKGYDVVDREEPLLGDD
GRGDGAGVGEVKRPRDESVSAGLLWNAGESPSLRSGGDASLGPAFGRHGR
TGGAIEGKDGHGGWLLPDGDGQHNSRGRGGGG
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