prot_L-elsbetiae_contig14026.3008.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig14026.3008.1
Unique Name	prot_L-elsbetiae_contig14026.3008.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	126

Homology

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BLAST of mRNA_L-elsbetiae_contig14026.3008.1 vs. uniprot
Match: D7G9D3_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9D3_ECTSI)

HSP 1 Score: 257 bits (656), Expect = 2.190e-86
Identity = 122/126 (96.83%), Postives = 125/126 (99.21%), Query Frame = 0

Query:    1 MGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYREV 126
            MGIMMGADPGASAFPNDDNLFEWTATL GSEDTAYEGLTYKLKLVFP+TYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNN+SPLNTEAAQLWADQDKYR+V
Sbjct:   17 MGIMMGADPGASAFPNDDNLFEWTATLCGSEDTAYEGLTYKLKLVFPDTYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNESPLNTEAAQLWADQDKYRQV 142

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BLAST of mRNA_L-elsbetiae_contig14026.3008.1 vs. uniprot
Match: A2WNC8_ORYSI (UBC core domain-containing protein n=1 Tax=Oryza sativa subsp. indica TaxID=39946 RepID=A2WNC8_ORYSI)

HSP 1 Score: 189 bits (479), Expect = 1.110e-59
Identity = 83/126 (65.87%), Postives = 102/126 (80.95%), Query Frame = 0

Query:    1 MGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYREV 126
            M +MMGADPG SAFP  DN+F W  T++GS  TAYEG +Y+L L FP  YPYK P + FETPCFHPNVD HGNICLDIL++KWSSA+ V TIL S++SLL +PNNDSPLNT+AA LW +QD++R++
Sbjct:    1 MALMMGADPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKPPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALWPNQDEFRKM 126

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BLAST of mRNA_L-elsbetiae_contig14026.3008.1 vs. uniprot
Match: I1HED7_BRADI (UBC core domain-containing protein n=11 Tax=Pooideae TaxID=147368 RepID=I1HED7_BRADI)

HSP 1 Score: 187 bits (476), Expect = 1.400e-58
Identity = 82/126 (65.08%), Postives = 102/126 (80.95%), Query Frame = 0

Query:    1 MGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYREV 126
            M +MMG DPG SAFP  DN+F+W  T+ GS  TAYEG +Y+L L FP  YPYK P + FETPCFHPNVD HGNICLDIL++KWSSA+ V TIL S++SLL +PNNDSPLNT+AA LWA+Q+++R++
Sbjct:   48 MALMMGGDPGVSAFPEGDNIFQWVGTIDGSAATAYEGTSYRLALSFPSDYPYKPPKVKFETPCFHPNVDTHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALWANQEEFRKM 173

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BLAST of mRNA_L-elsbetiae_contig14026.3008.1 vs. uniprot
Match: A0A0D9UZJ3_9ORYZ (UBC core domain-containing protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9UZJ3_9ORYZ)

HSP 1 Score: 187 bits (476), Expect = 2.320e-58
Identity = 82/126 (65.08%), Postives = 102/126 (80.95%), Query Frame = 0

Query:    1 MGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYREV 126
            M +MMG DPG SAFP  DN+F+W  T++GS  TAYEG +Y+L L FP  YPYK P + FETPCFHPNVD HGNICLDIL++KWSSA+ V TIL S++SLL +PNN+SPLNT+AA LW DQD++R++
Sbjct:   62 MSLMMGGDPGISAFPEGDNIFQWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKPPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSVQSLLGEPNNESPLNTQAAALWPDQDEFRKM 187

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BLAST of mRNA_L-elsbetiae_contig14026.3008.1 vs. uniprot
Match: A2ZRP5_ORYSJ (Os01g0273100 protein n=11 Tax=Oryzeae TaxID=147380 RepID=A2ZRP5_ORYSJ)

HSP 1 Score: 187 bits (475), Expect = 2.720e-58
Identity = 82/126 (65.08%), Postives = 101/126 (80.16%), Query Frame = 0

Query:    1 MGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYREV 126
            M +MMG DPG SAFP  DN+F W  T++GS  TAYEG +Y+L L FP  YPYK P + FETPCFHPNVD HGNICLDIL++KWSSA+ V TIL S++SLL +PNNDSPLNT+AA LW +QD++R++
Sbjct:   57 MALMMGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKPPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALWPNQDEFRKM 182

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BLAST of mRNA_L-elsbetiae_contig14026.3008.1 vs. uniprot
Match: A0A836CJV3_9STRA (Ubiquitin-conjugating enzyme E2C n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJV3_9STRA)

HSP 1 Score: 183 bits (465), Expect = 2.530e-57
Identity = 85/124 (68.55%), Postives = 100/124 (80.65%), Query Frame = 0

Query:    1 MGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYR 124
            M +MM  D  ASAFP++DNLFEW+AT+ GS+ T YE L Y+L + F + YPYKAP I F TPCFHPNVDEHGNICLDILKEKWS+A+SV +ILQSLRSLL+DPN DSPLN  AA LW DQ +Y+
Sbjct:   13 MSLMMAGDDDASAFPSEDNLFEWSATIRGSKGTVYEDLCYELSMSFNDEYPYKAPKIMFRTPCFHPNVDEHGNICLDILKEKWSAAYSVLSILQSLRSLLSDPNPDSPLNQVAANLWQDQTQYK 136

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BLAST of mRNA_L-elsbetiae_contig14026.3008.1 vs. uniprot
Match: K3XMD9_SETIT (UBC core domain-containing protein n=21 Tax=Panicoideae TaxID=147369 RepID=K3XMD9_SETIT)

HSP 1 Score: 184 bits (467), Expect = 3.370e-57
Identity = 80/126 (63.49%), Postives = 102/126 (80.95%), Query Frame = 0

Query:    1 MGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYREV 126
            M +MMG DPG SAFP+ DN+F W  T++GS  TAYEG +Y+L L F   YPYK P + F+TPCFHPNVD HGNICLDIL++KWSSA+ V TIL S++SLL +PNNDSPLNT+AA LWA+Q+++R++
Sbjct:   48 MALMMGGDPGVSAFPDGDNIFNWVGTIAGSAGTAYEGTSYRLALAFTAEYPYKPPKVRFDTPCFHPNVDTHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALWANQEEFRKM 173

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BLAST of mRNA_L-elsbetiae_contig14026.3008.1 vs. uniprot
Match: A0A7S3B7L5_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3B7L5_9VIRI)

HSP 1 Score: 184 bits (467), Expect = 6.520e-57
Identity = 83/126 (65.87%), Postives = 100/126 (79.37%), Query Frame = 0

Query:    1 MGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYREV 126
            M +M G DPG SAFP  +NLF W  T+ GS  T YEGLT+KL+L FP  YPYKAP +TFETPCFHPNVD+ GNICLDILKEKWSSA+ V T+L S++SLL +PNN+SPLN  AA LWA+Q++Y+ V
Sbjct:   65 MKLMCGGDPGVSAFPEGNNLFSWVGTIVGSAGTVYEGLTFKLRLKFPNDYPYKAPQVTFETPCFHPNVDQFGNICLDILKEKWSSAYDVRTVLLSIQSLLGEPNNESPLNGYAATLWANQEEYKAV 190

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BLAST of mRNA_L-elsbetiae_contig14026.3008.1 vs. uniprot
Match: A0A059LRK7_9CHLO (Ubiquitin-conjugating enzyme n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LRK7_9CHLO)

HSP 1 Score: 182 bits (461), Expect = 2.280e-56
Identity = 81/117 (69.23%), Postives = 96/117 (82.05%), Query Frame = 0

Query:    3 IMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWAD 119
            +MM  D   SAFP  D+LF WT T++G+E TAYEGLTY+L L FP  YP+KAP + FET CFHPNVD HGNICLDILKEKWS+A+SV T+LQS++SLLADPNNDSPLNT AA+LW +
Sbjct:   40 VMMNGDRSVSAFPQGDSLFSWTGTITGAEGTAYEGLTYRLSLAFPSDYPFKAPTVRFETKCFHPNVDLHGNICLDILKEKWSAAYSVLTVLQSIQSLLADPNNDSPLNTHAARLWVE 156

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BLAST of mRNA_L-elsbetiae_contig14026.3008.1 vs. uniprot
Match: A0A5J9T2P2_9POAL (UBC core domain-containing protein (Fragment) n=3 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9T2P2_9POAL)

HSP 1 Score: 182 bits (463), Expect = 4.070e-56
Identity = 80/126 (63.49%), Postives = 101/126 (80.16%), Query Frame = 0

Query:    1 MGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYREV 126
            M +MMG DPG SAFP  DN+F W  T++GS  TAYEG +Y+L L F   YPYK P + F+TPCFHPNVD HGNICLDIL++KWSSA+ V TIL S++SLL +PNNDSPLNT+AA LWA+Q+++R++
Sbjct:   47 MALMMGGDPGVSAFPEGDNIFNWVGTIAGSAGTAYEGTSYRLGLSFTSDYPYKPPKVRFDTPCFHPNVDVHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALWANQEEFRKM 172

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig14026.3008.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig14026.3008.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G9D3_ECTSI	2.190e-86	96.83	UBC core domain-containing protein n=2 Tax=Ectocar...	[more]
A2WNC8_ORYSI	1.110e-59	65.87	UBC core domain-containing protein n=1 Tax=Oryza s...	[more]
I1HED7_BRADI	1.400e-58	65.08	UBC core domain-containing protein n=11 Tax=Pooide...	[more]
A0A0D9UZJ3_9ORYZ	2.320e-58	65.08	UBC core domain-containing protein n=1 Tax=Leersia...	[more]
A2ZRP5_ORYSJ	2.720e-58	65.08	Os01g0273100 protein n=11 Tax=Oryzeae TaxID=147380...	[more]
A0A836CJV3_9STRA	2.530e-57	68.55	Ubiquitin-conjugating enzyme E2C n=1 Tax=Tribonema...	[more]
K3XMD9_SETIT	3.370e-57	63.49	UBC core domain-containing protein n=21 Tax=Panico...	[more]
A0A7S3B7L5_9VIRI	6.520e-57	65.87	Hypothetical protein n=1 Tax=Prasinoderma singular...	[more]
A0A059LRK7_9CHLO	2.280e-56	69.23	Ubiquitin-conjugating enzyme n=1 Tax=Helicosporidi...	[more]
A0A5J9T2P2_9POAL	4.070e-56	63.49	UBC core domain-containing protein (Fragment) n=3 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 1..125 e-value: 1.3E-42 score: 157.6
None	No IPR available	PANTHER	PTHR24068:SF223		coord: 1..122
None	No IPR available	PANTHER	PTHR24068	FAMILY NOT NAMED	coord: 1..122
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10		coord: 1..126 e-value: 8.3E-53 score: 180.0
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 4..119
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 8..123 e-value: 1.4E-41 score: 141.5
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 9..126 score: 33.655
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBIQUITIN_CONJUGAT_1	coord: 64..79

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig14026	contig	L-elsbetiae_contig14026:1898..4784 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig14026.3008.1	mRNA_L-elsbetiae_contig14026.3008.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig14026 1880..4784 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig14026.3008.1 ID=prot_L-elsbetiae_contig14026.3008.1|Name=mRNA_L-elsbetiae_contig14026.3008.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=126bp
MGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETY
PYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLL
ADPNNDSPLNTEAAQLWADQDKYREV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016135	UBQ-conjugating_enzyme/RWD
IPR000608	UBQ-conjugat_E2
IPR023313	UBQ-conjugating_AS