prot_L-elsbetiae_contig13999.2982.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13999.2982.1
Unique Nameprot_L-elsbetiae_contig13999.2982.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length449
Homology
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BLAST of mRNA_L-elsbetiae_contig13999.2982.1 vs. uniprot
Match: D8LN52_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN52_ECTSI)

HSP 1 Score: 747 bits (1928), Expect = 6.650e-270
Identity = 355/451 (78.71%), Postives = 394/451 (87.36%), Query Frame = 0 
Query:    1 MSKAAWAIGIDVACEFVPFTDIVSDVILLASVWPRTEVIAPDDVNGCGERALWYLALSFTVVGTLVDLFPEMLLLSEILLHPTVLTSAGSMGTLLRLIFSDGKPVVVFAATDNFEKPLAPPMLLLHDSLRRRMSCIATGLFLRDGCFGDRNPKWTYAGLVGILVGGELLTAIGACLFLRIEFGWPALISLLASLLALLISVRCHMRRVGEKVLD--HESATGDGGRLFEFLLPGPVVLARFLLAVPVWPLLLVYSESASFWPFSLANKGDHSLPFSNESMWVNPWDWFRVAVPALGVSDNDSPLSFLYWAIVPHLLWALVVTVWTGIVGIGKLVCWYFGHTQDWSAHSWAVYFSSHGSPFHVWSSKLQSALGLGFTMWVAKELKRLAVFSVLLAALVIEGYRRGGCLEQEWAFVFAVGAWWGIMLIGHAARKKNIFKPIEDGTA-AVADRW 448
            M+KA W I ID+ACEFVPFTDI+SDVILL +VWPRT VIAPDDV GCGERALWYLALSFTVVGTLVDLFPEMLL+SEI LHP+VLTS GSMGTLLRL+FSDGKPVVVFAAT+ FEKPLAPP+L + DSLRRR+S +AT  FLRDGC G  +PKWTYAGLVG+LVGGELLTAIGACLFLRIEFGWPALISLLASLLALLISVRCHMRRVGEK L   HESATG+GGRLFEFLLPGPV L RFLLAVPVWP+LLVYSE ASFWPFS+A++GDHSLP S +S+W NPWDWFRVAVP+L  SDNDSPLS++YWAIVPHLLW LV  VW G++G   LVCWYFGH +DWSAHSW VYFSS  SPF VWS++LQSALG+GFT W A+E +RL  FS  LAA+V++GYRRG CLEQEWAFVFAV AWW  +LIGHAARKKN+FKP+ +    AVADRW
Sbjct:    1 MNKATWVIAIDIACEFVPFTDILSDVILLIAVWPRTAVIAPDDVEGCGERALWYLALSFTVVGTLVDLFPEMLLVSEIALHPSVLTSPGSMGTLLRLVFSDGKPVVVFAATEEFEKPLAPPLLAIRDSLRRRLSSVATAFFLRDGC-GASSPKWTYAGLVGVLVGGELLTAIGACLFLRIEFGWPALISLLASLLALLISVRCHMRRVGEKTLHLCHESATGNGGRLFEFLLPGPVTLTRFLLAVPVWPMLLVYSEGASFWPFSMASRGDHSLPPSEDSLWANPWDWFRVAVPSLSRSDNDSPLSYVYWAIVPHLLWTLVSAVWVGLLGAANLVCWYFGHAEDWSAHSWGVYFSSQESPFSVWSARLQSALGMGFTAWAAREFRRLLAFSAALAAVVVQGYRRGACLEQEWAFVFAVAAWWIAVLIGHAARKKNMFKPLNEAAGPAVADRW 450
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BLAST of mRNA_L-elsbetiae_contig13999.2982.1 vs. uniprot
Match: A0A6H5JN14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN14_9PHAE)

HSP 1 Score: 577 bits (1487), Expect = 1.630e-204
Identity = 276/342 (80.70%), Postives = 303/342 (88.60%), Query Frame = 0 
Query:    1 MSKAAWAIGIDVACEFVPFTDIVSDVILLASVWPRTEVIAPDDVNGCGERALWYLALSFTVVGTLVDLFPEMLLLSEILLHPTVLTSAGSMGTLLRLIFSDGKPVVVFAATDNFEKPLAPPMLLLHDSLRRRMSCIATGLFLRDGCFGDRNPKWTYAGLVGILVGGELLTAIGACLFLRIEFGWPALISLLASLLALLISVRCHMRRVGEKVLD--HESATGDGGRLFEFLLPGPVVLARFLLAVPVWPLLLVYSESASFWPFSLANKGDHSLPFSNESMWVNPWDWFRVAVPALGVSDNDSPLSFLYWAIVPHLLWALVVTVWTGIVGIGKLVCWYFGHTQ 340
            M+K  W I ID+ACEFVPFTDI+SDVILL +VWPRT VIAPDDV GCGERALWYLALSFTVVGTLVDLFPEMLL+SEI LHP+VLTS GSMGTLLRL+FSDGKPVVVFAAT+ FEKPLAPP+L + DSLRRR+S +AT  FL DGC G  +PKWTYAGLVG+LVGGELLTAIGACLFLRIEFGWPALISLLASLLALLISVRCHMRRVGEK L   HESATG+GGRLFEFLLPGPV L RFLLAVPVWP+LLVYSE ASFWPFS+A++GDHSLP S ES+W NPWDWFRVAVP+L  SDNDSP+S++YWAIVPHLLW LV  VW G++G   LVCWYFGH +
Sbjct:    1 MNKTTWVIAIDIACEFVPFTDILSDVILLIAVWPRTAVIAPDDVEGCGERALWYLALSFTVVGTLVDLFPEMLLVSEIALHPSVLTSPGSMGTLLRLVFSDGKPVVVFAATEEFEKPLAPPLLAIRDSLRRRLSSVATAFFLGDGC-GASSPKWTYAGLVGVLVGGELLTAIGACLFLRIEFGWPALISLLASLLALLISVRCHMRRVGEKTLHLCHESATGNGGRLFEFLLPGPVTLTRFLLAVPVWPMLLVYSEGASFWPFSMASRGDHSLPPSGESLWANPWDWFRVAVPSLSRSDNDSPMSYVYWAIVPHLLWTLVSAVWVGLLGAANLVCWYFGHAE 341
[Close]
BLAST of mRNA_L-elsbetiae_contig13999.2982.1 vs. uniprot
Match: A0A6H5JNH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNH5_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 1.720e-50
Identity = 80/110 (72.73%), Postives = 92/110 (83.64%), Query Frame = 0 
Query:  340 QDWSAHSWAVYFSSHGSPFHVWSSKLQSALGLGFTMWVAKELKRLAVFSVLLAALVIEGYRRGGCLEQEWAFVFAVGAWWGIMLIGHAARKKNIFKPIEDG-TAAVADRW 448
            +DWSAHSW VYFSS  SPF VWS +LQSALG+GFT W A+E +RL  FS  LAA+V++GYRRG CLEQEWAFVFAV AWW ++LIGHAARKKNIFKP+ D  +AAVADRW
Sbjct:   10 EDWSAHSWGVYFSSQESPFSVWSWRLQSALGMGFTAWAAREFRRLLAFSAALAAVVVQGYRRGACLEQEWAFVFAVAAWWIVVLIGHAARKKNIFKPLNDAASAAVADRW 119
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13999.2982.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LN52_ECTSI6.650e-27078.71Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5JN14_9PHAE1.630e-20480.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNH5_9PHAE1.720e-5072.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 186..205
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 304..328
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 404..408
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 206..224
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 329..383
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 250..303
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 156..180
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 181..185
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 225..249
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 409..428
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 429..448
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 384..403
NoneNo IPR availableTMHMMTMhelixcoord: 384..399
NoneNo IPR availableTMHMMTMhelixcoord: 78..100
NoneNo IPR availableTMHMMTMhelixcoord: 228..250
NoneNo IPR availableTMHMMTMhelixcoord: 182..201
NoneNo IPR availableTMHMMTMhelixcoord: 304..326
NoneNo IPR availableTMHMMTMhelixcoord: 52..74
NoneNo IPR availableTMHMMTMhelixcoord: 409..428
NoneNo IPR availableTMHMMTMhelixcoord: 156..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13999contigL-elsbetiae_contig13999:355..3060 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13999.2982.1mRNA_L-elsbetiae_contig13999.2982.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13999 130..4659 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13999.2982.1 ID=prot_L-elsbetiae_contig13999.2982.1|Name=mRNA_L-elsbetiae_contig13999.2982.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=449bp
MSKAAWAIGIDVACEFVPFTDIVSDVILLASVWPRTEVIAPDDVNGCGER
ALWYLALSFTVVGTLVDLFPEMLLLSEILLHPTVLTSAGSMGTLLRLIFS
DGKPVVVFAATDNFEKPLAPPMLLLHDSLRRRMSCIATGLFLRDGCFGDR
NPKWTYAGLVGILVGGELLTAIGACLFLRIEFGWPALISLLASLLALLIS
VRCHMRRVGEKVLDHESATGDGGRLFEFLLPGPVVLARFLLAVPVWPLLL
VYSESASFWPFSLANKGDHSLPFSNESMWVNPWDWFRVAVPALGVSDNDS
PLSFLYWAIVPHLLWALVVTVWTGIVGIGKLVCWYFGHTQDWSAHSWAVY
FSSHGSPFHVWSSKLQSALGLGFTMWVAKELKRLAVFSVLLAALVIEGYR
RGGCLEQEWAFVFAVGAWWGIMLIGHAARKKNIFKPIEDGTAAVADRW*
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