prot_L-elsbetiae_contig1395.2958.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1395.2958.1
Unique Nameprot_L-elsbetiae_contig1395.2958.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length233
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1395.2958.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 158..233
e-value: 4.8E-5
score: 25.1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 51..233
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..50
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 31..42
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 43..50
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1395contigL-elsbetiae_contig1395:1825..4590 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1395.2958.1mRNA_L-elsbetiae_contig1395.2958.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1395 1078..4590 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1395.2958.1 ID=prot_L-elsbetiae_contig1395.2958.1|Name=mRNA_L-elsbetiae_contig1395.2958.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=233bp
MLLPPHAPRWVRQRRQRQQQRGVRGEIKTNASALLLSLALLADKPDVALG
WMHSARHVGGRQQAGGSRSATSLPAAVGTTSPNVARQRMLRLVAVTARRP
GRRSPSRLAGAAGTDPGKTFEAPVVEGAVAGQAATVSNRRSSGESAVVAS
DRRRVDQMKEWGAKGMWREAMEQLEKERRSERKPSLGAYERAILALAAGG
KHAKAVLMLGDVEAAGLVLREEIYSEVIRACGK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf