prot_L-elsbetiae_contig1393.2951.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1393.2951.1
Unique Nameprot_L-elsbetiae_contig1393.2951.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length245
Homology
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BLAST of mRNA_L-elsbetiae_contig1393.2951.1 vs. uniprot
Match: D8LES5_ECTSI (UVR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LES5_ECTSI)

HSP 1 Score: 299 bits (766), Expect = 5.490e-94
Identity = 174/252 (69.05%), Postives = 183/252 (72.62%), Query Frame = 0 
Query:    1 MTVAGGEGGCEMEGEVVGDGAESAPVARTEEDGCRDADVVAGXXXXXXXXXXXGTEADQSATSIAEXXXXXXXXXXXXXXXXXXXXXXXXXGGP----------SRRREAPLTEREGFAVAKKVLPAGGEGLEMDLEGLRVMRSQVNKLKRSMRQAVVEEDYKKAGVLRNEVAAIRAKDPLYVVSDLLGIAVSKEKFKRAARLRDAKDWLLRESRGSVFEVDRLVCLGNKASNIITTDPEGATVRRFLRNDQ 242
            M  AG  GGCEMEGEVVGDG ESAPVARTE++G RDA                GTEADQSA   A                          GGP           RRREAPLTEREGFA+ KKVLP GGEGLEMDLEGLR MRS VNK+KRSMR+AV EEDYK AG LRNE+AAIRAKDPLYVVSDLLG+AVSKEKFKRAARLRDAKDW+LRESRGSVFEVDRLVCLG+KASNIITTDPEGATVRRFLRNDQ
Sbjct:   89 MAAAGEGGGCEMEGEVVGDGGESAPVARTEDEGARDA---------------GGTEADQSAPVTASSEGQGGGVRSSINSASSSVPGS---GGPVGEVGGRGIVGRRREAPLTEREGFAMVKKVLPGGGEGLEMDLEGLRDMRSNVNKIKRSMRRAVEEEDYKTAGDLRNEMAAIRAKDPLYVVSDLLGVAVSKEKFKRAARLRDAKDWILRESRGSVFEVDRLVCLGDKASNIITTDPEGATVRRFLRNDQ 322
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BLAST of mRNA_L-elsbetiae_contig1393.2951.1 vs. uniprot
Match: A0A6H5KNT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNT6_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 3.160e-28
Identity = 78/145 (53.79%), Postives = 82/145 (56.55%), Query Frame = 0 
Query:    1 MTVAGGEGGCEMEGEVVGDGAESAPVARTEEDGCRDADVVAGXXXXXXXXXXXGTEADQSA----TSIAEXXXXXXXXXXXXXXXXXXXXXXXXXGGPS---RRREAPLTEREGFAVAKKVLPAGGEGLEMDLEGLRVMRSQVNK 138
            M  AG  GGCEMEGEVVGDGAESAPVARTE++G RDA                GTEADQ A    +S  +                         GG     RRRE PLTEREGFAV KKVLP GGEGLEMDLEGLR MRS VNK
Sbjct:   78 MAAAGEGGGCEMEGEVVGDGAESAPVARTEDEGARDA---------------GGTEADQPAPVPASSEEQGGGVRSSISSASSSVPGSGDPVEEVGGRGIIGRRREVPLTEREGFAVVKKVLPGGGEGLEMDLEGLRNMRSNVNK 207
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1393.2951.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LES5_ECTSI5.490e-9469.05UVR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KNT6_9PHAE3.160e-2853.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001943UVR domainPFAMPF02151UVRcoord: 135..167
e-value: 3.8E-5
score: 23.3
IPR001943UVR domainPROSITEPS50151UVRcoord: 133..168
score: 8.655

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1393contigL-elsbetiae_contig1393:17482..25197 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1393.2951.1mRNA_L-elsbetiae_contig1393.2951.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1393 17236..26377 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1393.2951.1 ID=prot_L-elsbetiae_contig1393.2951.1|Name=mRNA_L-elsbetiae_contig1393.2951.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=245bp
MTVAGGEGGCEMEGEVVGDGAESAPVARTEEDGCRDADVVAGAGAGAGAS
AAGGTEADQSATSIAEGGGGGAGGEEKVAAGAAEAGAEAGAGGPSRRREA
PLTEREGFAVAKKVLPAGGEGLEMDLEGLRVMRSQVNKLKRSMRQAVVEE
DYKKAGVLRNEVAAIRAKDPLYVVSDLLGIAVSKEKFKRAARLRDAKDWL
LRESRGSVFEVDRLVCLGNKASNIITTDPEGATVRRFLRNDQAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001943UVR_dom