prot_L-elsbetiae_contig13643.2772.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13643.2772.1
Unique Nameprot_L-elsbetiae_contig13643.2772.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length130
Homology
BLAST of mRNA_L-elsbetiae_contig13643.2772.1 vs. uniprot
Match: A0A392Q2T9_9FABA (Pre-mRNA-processing-splicing factor 8-like (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392Q2T9_9FABA)

HSP 1 Score: 277 bits (708), Expect = 1.460e-93
Identity = 123/130 (94.62%), Postives = 128/130 (98.46%), Query Frame = 0
Query:    1 DRHTLAYDKGWRVRTDFKQYQILRQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRAGLNQIPNRRFTLWWSPTINRANVYVGFQARL 130
            DRHTLAYDKGWRVR DFKQYQ+L+QNPFWWTHQRHDGKLWNLNNYRTD+IQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQR+GLNQIPNRRFTLWWSPTINRANVYVGFQ +L
Sbjct:   70 DRHTLAYDKGWRVRADFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQL 199          
BLAST of mRNA_L-elsbetiae_contig13643.2772.1 vs. uniprot
Match: I3L3Z8_HUMAN (Pre-mRNA-processing-splicing factor 8 (Fragment) n=4 Tax=Boreoeutheria TaxID=1437010 RepID=I3L3Z8_HUMAN)

HSP 1 Score: 278 bits (712), Expect = 1.950e-93
Identity = 124/130 (95.38%), Postives = 129/130 (99.23%), Query Frame = 0
Query:    1 DRHTLAYDKGWRVRTDFKQYQILRQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRAGLNQIPNRRFTLWWSPTINRANVYVGFQARL 130
            DRHTLAYDKGWRVRTDFKQYQ+L+QNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMK+KKLTNAQR+GLNQIPNRRFTLWWSPTINRANVYVGFQ +L
Sbjct:   70 DRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQL 199          
BLAST of mRNA_L-elsbetiae_contig13643.2772.1 vs. uniprot
Match: A0A1B6JTR3_9HEMI (U6-snRNA_bdg domain-containing protein (Fragment) n=2 Tax=Bilateria TaxID=33213 RepID=A0A1B6JTR3_9HEMI)

HSP 1 Score: 278 bits (712), Expect = 8.640e-93
Identity = 123/130 (94.62%), Postives = 129/130 (99.23%), Query Frame = 0
Query:    1 DRHTLAYDKGWRVRTDFKQYQILRQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRAGLNQIPNRRFTLWWSPTINRANVYVGFQARL 130
            DRHTLAYDKGWR+RT+FKQYQ+L+QNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQR+GLNQIPNRRFTLWWSPTINRANVYVGFQ +L
Sbjct:  114 DRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQL 243          
BLAST of mRNA_L-elsbetiae_contig13643.2772.1 vs. uniprot
Match: A0A1S3GU36_DIPOR (pre-mRNA-processing-splicing factor 8-like n=2 Tax=Bilateria TaxID=33213 RepID=A0A1S3GU36_DIPOR)

HSP 1 Score: 278 bits (712), Expect = 2.270e-92
Identity = 124/130 (95.38%), Postives = 129/130 (99.23%), Query Frame = 0
Query:    1 DRHTLAYDKGWRVRTDFKQYQILRQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRAGLNQIPNRRFTLWWSPTINRANVYVGFQARL 130
            DRHTLAYDKGWRVRTDFKQYQ+L+QNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMK+KKLTNAQR+GLNQIPNRRFTLWWSPTINRANVYVGFQ +L
Sbjct:   39 DRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQL 168          
BLAST of mRNA_L-elsbetiae_contig13643.2772.1 vs. uniprot
Match: A0A0R3TIL3_RODNA (Uncharacterized protein n=2 Tax=Rodentolepis nana TaxID=102285 RepID=A0A0R3TIL3_RODNA)

HSP 1 Score: 279 bits (713), Expect = 1.250e-91
Identity = 124/130 (95.38%), Postives = 129/130 (99.23%), Query Frame = 0
Query:    1 DRHTLAYDKGWRVRTDFKQYQILRQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRAGLNQIPNRRFTLWWSPTINRANVYVGFQARL 130
            DRHTLAYDKGWRVRT+FKQYQ+L+QNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQR+GLNQIPNRRFTLWWSPTINRANVYVGFQ +L
Sbjct:   24 DRHTLAYDKGWRVRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQL 153          
BLAST of mRNA_L-elsbetiae_contig13643.2772.1 vs. uniprot
Match: A0A0S7F200_9TELE (PRP8 n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7F200_9TELE)

HSP 1 Score: 278 bits (712), Expect = 1.520e-91
Identity = 124/130 (95.38%), Postives = 129/130 (99.23%), Query Frame = 0
Query:    1 DRHTLAYDKGWRVRTDFKQYQILRQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRAGLNQIPNRRFTLWWSPTINRANVYVGFQARL 130
            DRHTLAYDKGWRVRTDFKQYQ+L+QNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMK+KKLTNAQR+GLNQIPNRRFTLWWSPTINRANVYVGFQ +L
Sbjct:   70 DRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQL 199          
BLAST of mRNA_L-elsbetiae_contig13643.2772.1 vs. uniprot
Match: A0A2P8XBN0_BLAGE (Pre-mRNA-processing-splicing factor 8 n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8XBN0_BLAGE)

HSP 1 Score: 276 bits (707), Expect = 3.570e-91
Identity = 122/127 (96.06%), Postives = 127/127 (100.00%), Query Frame = 0
Query:    1 DRHTLAYDKGWRVRTDFKQYQILRQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRAGLNQIPNRRFTLWWSPTINRANVYVGFQ 127
            DRHTLAYDKGWR+RT+FKQYQ+L+QNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQR+GLNQIPNRRFTLWWSPTINRANVYVGFQ
Sbjct:  177 DRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQ 303          
BLAST of mRNA_L-elsbetiae_contig13643.2772.1 vs. uniprot
Match: UPI000900C6A3 (pre-mRNA-processing-splicing factor 8A-like n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI000900C6A3)

HSP 1 Score: 277 bits (709), Expect = 3.020e-90
Identity = 124/130 (95.38%), Postives = 128/130 (98.46%), Query Frame = 0
Query:    1 DRHTLAYDKGWRVRTDFKQYQILRQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRAGLNQIPNRRFTLWWSPTINRANVYVGFQARL 130
            DRHTLAYDKGWRVRTDFKQYQ L+QNPFWWTHQRHDGKLWNLNNYRTD+IQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQR+GLNQIPNRRFTLWWSPTINRANVYVGFQ +L
Sbjct:  120 DRHTLAYDKGWRVRTDFKQYQALKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQL 249          
BLAST of mRNA_L-elsbetiae_contig13643.2772.1 vs. uniprot
Match: UPI0019670C2E (pre-mRNA-processing-splicing factor 8A-like n=1 Tax=Medicago truncatula TaxID=3880 RepID=UPI0019670C2E)

HSP 1 Score: 269 bits (688), Expect = 4.340e-90
Identity = 120/130 (92.31%), Postives = 126/130 (96.92%), Query Frame = 0
Query:    1 DRHTLAYDKGWRVRTDFKQYQILRQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRAGLNQIPNRRFTLWWSPTINRANVYVGFQARL 130
            DRHTLAYDKGWRVR DFKQYQ+L+QNPFWWTHQRHDGKLWNLNNYRTD+IQALGG+EGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQR+GLNQI N RFTLWWSPTINRANVYVGFQ +L
Sbjct:   32 DRHTLAYDKGWRVRLDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGIEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQILNCRFTLWWSPTINRANVYVGFQVQL 161          
BLAST of mRNA_L-elsbetiae_contig13643.2772.1 vs. uniprot
Match: K7I7W2_CAEJA (U6-snRNA_bdg domain-containing protein n=3 Tax=Protostomia TaxID=33317 RepID=K7I7W2_CAEJA)

HSP 1 Score: 271 bits (692), Expect = 1.180e-89
Identity = 120/129 (93.02%), Postives = 127/129 (98.45%), Query Frame = 0
Query:    2 RHTLAYDKGWRVRTDFKQYQILRQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRAGLNQIPNRRFTLWWSPTINRANVYVGFQARL 130
            RHTLAYDKGWRVRT+FK YQIL+QNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLF+GTYFPTWEGLFWE+ASGFEESMK+KKLTNAQR+GLNQIPNRRFTLWWSPTINRANVYVGFQ +L
Sbjct:   71 RHTLAYDKGWRVRTEFKAYQILKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFRGTYFPTWEGLFWERASGFEESMKFKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQL 199          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13643.2772.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A392Q2T9_9FABA1.460e-9394.62Pre-mRNA-processing-splicing factor 8-like (Fragme... [more]
I3L3Z8_HUMAN1.950e-9395.38Pre-mRNA-processing-splicing factor 8 (Fragment) n... [more]
A0A1B6JTR3_9HEMI8.640e-9394.62U6-snRNA_bdg domain-containing protein (Fragment) ... [more]
A0A1S3GU36_DIPOR2.270e-9295.38pre-mRNA-processing-splicing factor 8-like n=2 Tax... [more]
A0A0R3TIL3_RODNA1.250e-9195.38Uncharacterized protein n=2 Tax=Rodentolepis nana ... [more]
A0A0S7F200_9TELE1.520e-9195.38PRP8 n=2 Tax=Poeciliopsis prolifica TaxID=188132 R... [more]
A0A2P8XBN0_BLAGE3.570e-9196.06Pre-mRNA-processing-splicing factor 8 n=1 Tax=Blat... [more]
UPI000900C6A33.020e-9095.38pre-mRNA-processing-splicing factor 8A-like n=1 Ta... [more]
UPI0019670C2E4.340e-9092.31pre-mRNA-processing-splicing factor 8A-like n=1 Ta... [more]
K7I7W2_CAEJA1.180e-8993.02U6-snRNA_bdg domain-containing protein n=3 Tax=Pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019580Pre-mRNA-processing-splicing factor 8, U6-snRNA-bindingPFAMPF10596U6-snRNA_bdgcoord: 17..130
e-value: 3.7E-60
score: 202.5
NoneNo IPR availablePANTHERPTHR11140:SF1coord: 1..130
IPR027652Pre-mRNA-processing-splicing factor 8PANTHERPTHR11140PRE-MRNA SPLICING FACTOR PRP8coord: 1..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13643contigL-elsbetiae_contig13643:548..1929 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13643.2772.1mRNA_L-elsbetiae_contig13643.2772.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13643 548..1929 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13643.2772.1 ID=prot_L-elsbetiae_contig13643.2772.1|Name=mRNA_L-elsbetiae_contig13643.2772.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=130bp
DRHTLAYDKGWRVRTDFKQYQILRQNPFWWTHQRHDGKLWNLNNYRTDMI
QALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRAG
LNQIPNRRFTLWWSPTINRANVYVGFQARL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019580Prp8_U6-snRNA-bd
IPR027652PRP8