mRNA_L-elsbetiae_contig13643.2772.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13643.2772.1 vs. uniprot
Match: A0A392Q2T9_9FABA (Pre-mRNA-processing-splicing factor 8-like (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392Q2T9_9FABA) HSP 1 Score: 277 bits (708), Expect = 1.460e-93 Identity = 123/130 (94.62%), Postives = 128/130 (98.46%), Query Frame = 1 Query: 1 DRHTLAYDKGWRVRTDFKQYQILRQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRAGLNQIPNRRFTLWWSPTINRANVYVGFQARL 390 DRHTLAYDKGWRVR DFKQYQ+L+QNPFWWTHQRHDGKLWNLNNYRTD+IQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQR+GLNQIPNRRFTLWWSPTINRANVYVGFQ +L Sbjct: 70 DRHTLAYDKGWRVRADFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQL 199
BLAST of mRNA_L-elsbetiae_contig13643.2772.1 vs. uniprot
Match: I3L3Z8_HUMAN (Pre-mRNA-processing-splicing factor 8 (Fragment) n=4 Tax=Boreoeutheria TaxID=1437010 RepID=I3L3Z8_HUMAN) HSP 1 Score: 278 bits (712), Expect = 1.950e-93 Identity = 124/130 (95.38%), Postives = 129/130 (99.23%), Query Frame = 1 Query: 1 DRHTLAYDKGWRVRTDFKQYQILRQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRAGLNQIPNRRFTLWWSPTINRANVYVGFQARL 390 DRHTLAYDKGWRVRTDFKQYQ+L+QNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMK+KKLTNAQR+GLNQIPNRRFTLWWSPTINRANVYVGFQ +L Sbjct: 70 DRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQL 199
BLAST of mRNA_L-elsbetiae_contig13643.2772.1 vs. uniprot
Match: A0A1B6JTR3_9HEMI (U6-snRNA_bdg domain-containing protein (Fragment) n=2 Tax=Bilateria TaxID=33213 RepID=A0A1B6JTR3_9HEMI) HSP 1 Score: 278 bits (712), Expect = 8.640e-93 Identity = 123/130 (94.62%), Postives = 129/130 (99.23%), Query Frame = 1 Query: 1 DRHTLAYDKGWRVRTDFKQYQILRQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRAGLNQIPNRRFTLWWSPTINRANVYVGFQARL 390 DRHTLAYDKGWR+RT+FKQYQ+L+QNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQR+GLNQIPNRRFTLWWSPTINRANVYVGFQ +L Sbjct: 114 DRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQL 243
BLAST of mRNA_L-elsbetiae_contig13643.2772.1 vs. uniprot
Match: A0A1S3GU36_DIPOR (pre-mRNA-processing-splicing factor 8-like n=2 Tax=Bilateria TaxID=33213 RepID=A0A1S3GU36_DIPOR) HSP 1 Score: 278 bits (712), Expect = 2.270e-92 Identity = 124/130 (95.38%), Postives = 129/130 (99.23%), Query Frame = 1 Query: 1 DRHTLAYDKGWRVRTDFKQYQILRQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRAGLNQIPNRRFTLWWSPTINRANVYVGFQARL 390 DRHTLAYDKGWRVRTDFKQYQ+L+QNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMK+KKLTNAQR+GLNQIPNRRFTLWWSPTINRANVYVGFQ +L Sbjct: 39 DRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQL 168
BLAST of mRNA_L-elsbetiae_contig13643.2772.1 vs. uniprot
Match: A0A0R3TIL3_RODNA (Uncharacterized protein n=2 Tax=Rodentolepis nana TaxID=102285 RepID=A0A0R3TIL3_RODNA) HSP 1 Score: 279 bits (713), Expect = 1.250e-91 Identity = 124/130 (95.38%), Postives = 129/130 (99.23%), Query Frame = 1 Query: 1 DRHTLAYDKGWRVRTDFKQYQILRQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRAGLNQIPNRRFTLWWSPTINRANVYVGFQARL 390 DRHTLAYDKGWRVRT+FKQYQ+L+QNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQR+GLNQIPNRRFTLWWSPTINRANVYVGFQ +L Sbjct: 24 DRHTLAYDKGWRVRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQL 153
BLAST of mRNA_L-elsbetiae_contig13643.2772.1 vs. uniprot
Match: A0A0S7F200_9TELE (PRP8 n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7F200_9TELE) HSP 1 Score: 278 bits (712), Expect = 1.520e-91 Identity = 124/130 (95.38%), Postives = 129/130 (99.23%), Query Frame = 1 Query: 1 DRHTLAYDKGWRVRTDFKQYQILRQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRAGLNQIPNRRFTLWWSPTINRANVYVGFQARL 390 DRHTLAYDKGWRVRTDFKQYQ+L+QNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMK+KKLTNAQR+GLNQIPNRRFTLWWSPTINRANVYVGFQ +L Sbjct: 70 DRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQL 199
BLAST of mRNA_L-elsbetiae_contig13643.2772.1 vs. uniprot
Match: A0A2P8XBN0_BLAGE (Pre-mRNA-processing-splicing factor 8 n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8XBN0_BLAGE) HSP 1 Score: 276 bits (707), Expect = 3.570e-91 Identity = 122/127 (96.06%), Postives = 127/127 (100.00%), Query Frame = 1 Query: 1 DRHTLAYDKGWRVRTDFKQYQILRQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRAGLNQIPNRRFTLWWSPTINRANVYVGFQ 381 DRHTLAYDKGWR+RT+FKQYQ+L+QNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQR+GLNQIPNRRFTLWWSPTINRANVYVGFQ Sbjct: 177 DRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQ 303
BLAST of mRNA_L-elsbetiae_contig13643.2772.1 vs. uniprot
Match: UPI000900C6A3 (pre-mRNA-processing-splicing factor 8A-like n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI000900C6A3) HSP 1 Score: 277 bits (709), Expect = 3.020e-90 Identity = 124/130 (95.38%), Postives = 128/130 (98.46%), Query Frame = 1 Query: 1 DRHTLAYDKGWRVRTDFKQYQILRQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRAGLNQIPNRRFTLWWSPTINRANVYVGFQARL 390 DRHTLAYDKGWRVRTDFKQYQ L+QNPFWWTHQRHDGKLWNLNNYRTD+IQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQR+GLNQIPNRRFTLWWSPTINRANVYVGFQ +L Sbjct: 120 DRHTLAYDKGWRVRTDFKQYQALKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQL 249
BLAST of mRNA_L-elsbetiae_contig13643.2772.1 vs. uniprot
Match: UPI0019670C2E (pre-mRNA-processing-splicing factor 8A-like n=1 Tax=Medicago truncatula TaxID=3880 RepID=UPI0019670C2E) HSP 1 Score: 269 bits (688), Expect = 4.340e-90 Identity = 120/130 (92.31%), Postives = 126/130 (96.92%), Query Frame = 1 Query: 1 DRHTLAYDKGWRVRTDFKQYQILRQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRAGLNQIPNRRFTLWWSPTINRANVYVGFQARL 390 DRHTLAYDKGWRVR DFKQYQ+L+QNPFWWTHQRHDGKLWNLNNYRTD+IQALGG+EGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQR+GLNQI N RFTLWWSPTINRANVYVGFQ +L Sbjct: 32 DRHTLAYDKGWRVRLDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGIEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQILNCRFTLWWSPTINRANVYVGFQVQL 161
BLAST of mRNA_L-elsbetiae_contig13643.2772.1 vs. uniprot
Match: K7I7W2_CAEJA (U6-snRNA_bdg domain-containing protein n=3 Tax=Protostomia TaxID=33317 RepID=K7I7W2_CAEJA) HSP 1 Score: 271 bits (692), Expect = 1.180e-89 Identity = 120/129 (93.02%), Postives = 127/129 (98.45%), Query Frame = 1 Query: 4 RHTLAYDKGWRVRTDFKQYQILRQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRAGLNQIPNRRFTLWWSPTINRANVYVGFQARL 390 RHTLAYDKGWRVRT+FK YQIL+QNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLF+GTYFPTWEGLFWE+ASGFEESMK+KKLTNAQR+GLNQIPNRRFTLWWSPTINRANVYVGFQ +L Sbjct: 71 RHTLAYDKGWRVRTEFKAYQILKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFRGTYFPTWEGLFWERASGFEESMKFKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQL 199 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13643.2772.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13643.2772.1 >prot_L-elsbetiae_contig13643.2772.1 ID=prot_L-elsbetiae_contig13643.2772.1|Name=mRNA_L-elsbetiae_contig13643.2772.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=130bp DRHTLAYDKGWRVRTDFKQYQILRQNPFWWTHQRHDGKLWNLNNYRTDMIback to top mRNA from alignment at L-elsbetiae_contig13643:548..1929+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13643.2772.1 ID=mRNA_L-elsbetiae_contig13643.2772.1|Name=mRNA_L-elsbetiae_contig13643.2772.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1382bp|location=Sequence derived from alignment at L-elsbetiae_contig13643:548..1929+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13643:548..1929+ >mRNA_L-elsbetiae_contig13643.2772.1 ID=mRNA_L-elsbetiae_contig13643.2772.1|Name=mRNA_L-elsbetiae_contig13643.2772.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=780bp|location=Sequence derived from alignment at L-elsbetiae_contig13643:548..1929+ (Laminarionema elsbetiae ELsaHSoW15)back to top |