prot_L-elsbetiae_contig1360.2744.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1360.2744.1
Unique Nameprot_L-elsbetiae_contig1360.2744.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length339
Homology
BLAST of mRNA_L-elsbetiae_contig1360.2744.1 vs. uniprot
Match: D8LFT4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFT4_ECTSI)

HSP 1 Score: 349 bits (895), Expect = 3.100e-116
Identity = 224/350 (64.00%), Postives = 243/350 (69.43%), Query Frame = 0
Query:    5 KRPLEEISQGPTSELSKTERRRLAKKAKKERQGKTTGGGA-----AGKGGVAAKAAKKGPKPKMTKEERRAKYTQKAYEARERQNQLGPGANKTRCLGCRAWGHIVANCPEAKAATGICFNCGSSKHALRVCPKSKQKDGSLPHATCFVCKEKGHISAHCKQNANGVYPKGGFCKGCGSKHHLSWDCPDSTKVDKKKLNKT----DAASAAGAGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAGDSKAKRRKADDGSGTPSRAR-GSKRPPAPRSGGDDLEDDGYYDPEDVPDAPFE-ADGAEDQAWA-----VAGPAAGRAGVAAAAAGKKKSKVVVF 338
            KR +EEISQGP S+L+KTERRRLAKKAK                 +G G    +   KG KPKMTKEERRAKYTQKAYEARE+QNQLGPGANKTRCLGCRAWGHIVANCPEAKAATGICFNCGS+KHALRVCP  KQKDGSLP+ATCF+CK KGHISAHCKQNANGVYPKGGFCK CGSKHHLSWDCP+STKVDKKKLNK     DAA  A A                       XXXXXXXXXXXXXXXX                   S AR GSKR PA R GGDDLEDDGYYDP+DVPDA FE  DG E++ W+     VA   +G+ G  ++A  +  SKVVVF
Sbjct:    4 KRSMEEISQGPASDLNKTERRRLAKKAKXXXXXXXXXXXXXXXVNSGAGTAPGRTKNKGHKPKMTKEERRAKYTQKAYEAREKQNQLGPGANKTRCLGCRAWGHIVANCPEAKAATGICFNCGSAKHALRVCPAPKQKDGSLPYATCFICKAKGHISAHCKQNANGVYPKGGFCKWCGSKHHLSWDCPESTKVDKKKLNKNVKKDDAAGTASAADDVPDPGDSGKDRGTASKEARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSARAGSKRAPASRIGGDDLEDDGYYDPDDVPDASFEHPDGTEEKLWSGSSGGVASQGSGKGG--SSAKRQLSSKVVVF 351          
BLAST of mRNA_L-elsbetiae_contig1360.2744.1 vs. uniprot
Match: A0A1Z5JJ88_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJ88_FISSO)

HSP 1 Score: 106 bits (265), Expect = 4.960e-24
Identity = 58/141 (41.13%), Postives = 78/141 (55.32%), Query Frame = 0
Query:   57 KGPKPKMTKEERRAKYTQKAYEARERQNQLGPGANKTRCLGCRAWGHIVANCPEAKAATGICFNCGSSKHALRVCPKSKQK-DGSLPHATCFVCKEKGHISAHCKQNANGVYPKGGFCKGCGSKHHLSWDCPDSTKVDKKK 196
            K P  K+TKEERRAKYT+ A + R+++ +     ++T C  CR  GH +A CP+   +  +               K K K D  LP A CFVC ++GH+S  C QN  G+Y  GG C+ CGS  H + DCPD+ K  KKK
Sbjct:    6 KHPGSKITKEERRAKYTKIARD-RKQKERTRLKESQTTCFHCRKHGHSLAQCPDKPQSVQLXXXXXXXXXXXXXXXKMKDKNDSDLPFAKCFVCHKEGHLSRQCPQNTKGIYVNGGSCRLCGSTEHRATDCPDNDKKKKKK 145          
BLAST of mRNA_L-elsbetiae_contig1360.2744.1 vs. uniprot
Match: A0A448Z930_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z930_9STRA)

HSP 1 Score: 102 bits (254), Expect = 5.320e-22
Identity = 59/155 (38.06%), Postives = 78/155 (50.32%), Query Frame = 0
Query:   59 PKPKMTKEERRAKYTQKAYEARERQNQLGPGANKTR----CLGCRAWGHIVANCP------EAKAATGI--CFNCGSSKHALRVCPKS----------KQKDGSLPHATCFVCKEKGHISAHCKQNANGVYPKGGFCKGCGSKHHLSWDCPDSTK 191
            PKPKMTKEERR KYT  A + R++QN +  G  +T     C  CR  GH  A CP      E  ++ G   C  C  +                    +     LP ATCFVC EKGH+++ C +N +G+Y  GG C+ CGS  HL+ +CP+  K
Sbjct:   12 PKPKMTKEERRKKYTDIARKRRDKQNGIRNGGGRTNKNSVCYNCRQPGHNAAECPNRSGGGEGSSSGGAVACTPCADTSXXXXXXXXXXXXXXXXXXHRGDPTDLPFATCFVCGEKGHLASACSRNTHGIYVNGGSCRFCGSLQHLATNCPEKRK 166          
BLAST of mRNA_L-elsbetiae_contig1360.2744.1 vs. uniprot
Match: A0A835ZFQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFQ1_9STRA)

HSP 1 Score: 103 bits (256), Expect = 9.500e-22
Identity = 76/212 (35.85%), Postives = 104/212 (49.06%), Query Frame = 0
Query:   17 SELSKTERRRLAKKAKKERQGKTTGGGAAGKGGVAAKAAKKGPKPKMTKEERRAKYTQKAYEARERQNQL-------------GPG---------------ANKTRCLGCRAWGHIVANCPEA--KAATGICFNCGSSKHALRVCP---KSKQKDGSLPHATCFVCKEKGHISAHCKQNANGVYPKGGFCKGCGSKHHLSWDCPD-STKVDK 194
            S LSK+ERRRL K+AKK  + K    G         +A +K  KP +TKE+RR ++T  A + RE                  G G               ANK  CLGCR  GH++ +C +A  +AA+ +C+ CGS++H L+ CP   +++ K      AT               QNA G+YPKGG CK C S  HL+ DCP+  TK D+
Sbjct:   21 STLSKSERRRLTKEAKKALKAKQVAKG---------EAPQKASKPTITKEQRRERFTAIAKKRREXXXXXXXXXGVIKSGARGGAGRDDGGNRATGDAEGAANKLYCLGCRGKGHLIKDCKKATARAASVVCYRCGSTEHTLKGCPEEARARDKRAVTTFATXXXXXXXXXXXXXXXQNARGIYPKGGCCKICESVRHLASDCPERGTKRDR 223          
BLAST of mRNA_L-elsbetiae_contig1360.2744.1 vs. uniprot
Match: A0A2W1BVU7_HELAM (Uncharacterized protein n=3 Tax=Heliothinae TaxID=95178 RepID=A0A2W1BVU7_HELAM)

HSP 1 Score: 105 bits (262), Expect = 1.000e-21
Identity = 50/108 (46.30%), Postives = 63/108 (58.33%), Query Frame = 0
Query:   95 CLGCRAWGHIVANCPEAKA-------ATGICFNCGSSKHALRVCPKSKQKDGSLPHATCFVCKEKGHISAHCKQNANGVYPKGGFCKGCGSKHHLSWDCPDSTKVDKK 195
            C  CR  GH++++CPE K+       A G+CF CGS++H    C    Q+D     ATCF+CKE GHI+  C  N  G+YP GG CK CG   HL  DCP  T +DKK
Sbjct:  297 CYNCRKGGHVLSDCPELKSKIPGADTAEGVCFKCGSTEHRQFEC--KVQRDKEFRFATCFICKEPGHIARQCPDNPKGLYPNGGSCKLCGDVTHLRKDCP--TVMDKK 400          
BLAST of mRNA_L-elsbetiae_contig1360.2744.1 vs. uniprot
Match: UPI001FA092A8 (Uncharacterized protein n=1 Tax=Spodoptera exigua TaxID=7107 RepID=UPI001FA092A8)

HSP 1 Score: 105 bits (261), Expect = 1.550e-21
Identity = 50/108 (46.30%), Postives = 62/108 (57.41%), Query Frame = 0
Query:   95 CLGCRAWGHIVANCPEAK-------AATGICFNCGSSKHALRVCPKSKQKDGSLPHATCFVCKEKGHISAHCKQNANGVYPKGGFCKGCGSKHHLSWDCPDSTKVDKK 195
            C  CR  GH++++CP+ K       AA G+CF CGS++H    C    Q+D     ATCF+CKE GHI+  C  N  G+YP GG CK CG   HL  DCP  T  DKK
Sbjct:  311 CYNCRKGGHVLSDCPDLKSKIPSADAAEGVCFKCGSTEHRQFEC--KVQRDKEFRFATCFICKEPGHIARQCPDNPKGLYPNGGSCKLCGDVTHLRKDCP--TLTDKK 414          
BLAST of mRNA_L-elsbetiae_contig1360.2744.1 vs. uniprot
Match: UPI000C13F5BA (zinc finger CCHC domain-containing protein 9-like n=1 Tax=Spodoptera litura TaxID=69820 RepID=UPI000C13F5BA)

HSP 1 Score: 105 bits (261), Expect = 1.570e-21
Identity = 50/108 (46.30%), Postives = 62/108 (57.41%), Query Frame = 0
Query:   95 CLGCRAWGHIVANCPEAK-------AATGICFNCGSSKHALRVCPKSKQKDGSLPHATCFVCKEKGHISAHCKQNANGVYPKGGFCKGCGSKHHLSWDCPDSTKVDKK 195
            C  CR  GH++++CP+ K       AA G+CF CGS++H    C    Q+D     ATCF+CKE GHI+  C  N  G+YP GG CK CG   HL  DCP  T  DKK
Sbjct:  313 CYNCRKGGHVLSDCPDLKSKIPSADAAEGVCFKCGSTEHRQFEC--KVQRDKEFRFATCFICKEPGHIARQCPDNPKGLYPNGGSCKLCGDVTHLRKDCP--TLTDKK 416          
BLAST of mRNA_L-elsbetiae_contig1360.2744.1 vs. uniprot
Match: A0A7E5X0Y8_TRINI (zinc finger CCHC domain-containing protein 9-like n=1 Tax=Trichoplusia ni TaxID=7111 RepID=A0A7E5X0Y8_TRINI)

HSP 1 Score: 104 bits (260), Expect = 1.810e-21
Identity = 47/103 (45.63%), Postives = 59/103 (57.28%), Query Frame = 0
Query:   95 CLGCRAWGHIVANCPEAKA-------ATGICFNCGSSKHALRVCPKSKQKDGSLPHATCFVCKEKGHISAHCKQNANGVYPKGGFCKGCGSKHHLSWDCPDST 190
            C  CR  GH++++CPE K        A G+CF CGS++H    C    Q+D     ATCF+CKE GHI+  C  N  G+YP GG CK CG   HL  DCP +T
Sbjct:  293 CYNCRKGGHVLSDCPELKTKIPGSDLAEGVCFKCGSTEHRQFEC--KVQRDKEFRFATCFICKEPGHIARQCPDNPKGLYPNGGSCKLCGDVTHLRKDCPTAT 393          
BLAST of mRNA_L-elsbetiae_contig1360.2744.1 vs. uniprot
Match: A0A2H1WYX6_SPOFR (SFRICE_012405 n=2 Tax=Spodoptera frugiperda TaxID=7108 RepID=A0A2H1WYX6_SPOFR)

HSP 1 Score: 104 bits (260), Expect = 2.160e-21
Identity = 50/108 (46.30%), Postives = 61/108 (56.48%), Query Frame = 0
Query:   95 CLGCRAWGHIVANCPEAK-------AATGICFNCGSSKHALRVCPKSKQKDGSLPHATCFVCKEKGHISAHCKQNANGVYPKGGFCKGCGSKHHLSWDCPDSTKVDKK 195
            C  CR  GH+++ CP+ K       AA G+CF CGS++H    C    Q+D     ATCF+CKE GHI+  C  N  G+YP GG CK CG   HL  DCP  T  DKK
Sbjct:  314 CYNCRKGGHVLSECPDLKSKIPSADAAEGVCFKCGSTEHRQFEC--KVQRDKEFRFATCFICKEPGHIARQCPDNPKGLYPNGGSCKLCGDVTHLRKDCP--TLTDKK 417          
BLAST of mRNA_L-elsbetiae_contig1360.2744.1 vs. uniprot
Match: A0A7S3VAT3_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VAT3_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 3.970e-21
Identity = 65/171 (38.01%), Postives = 83/171 (48.54%), Query Frame = 0
Query:   59 PKPKMTKEERRAKYTQKAYEARERQNQLGPGANKTRCLGCRAWGHIVANCPEA-KAATGICFNCGSSKHAL---------------RVCPKSKQKDGS---------LPHATCFVCKEKGHISAHCKQNANGVYPKGGFCKGCGSKHHLSWDCPDSTKVDKKKLNKTDAAS 204
            PK K+TKEERR KYT KA   R ++N +    +K  C  CR  GH  A CP   K A G        +                  ++    K+   S         LP ATCF+CK+KGH+S+ C+QN NG+Y KGG CK CGSK HL  DCP   K ++      D +S
Sbjct:    9 PKRKITKEERRVKYTAKAKARRTKKNHV----DKV-CFNCRRKGHTAAECPNINKDADGSMTTATKLRSQXXXXXXXXXXXXXXXXKLTSNEKKVGNSGRLDYFSMILPFATCFICKKKGHLSSQCEQNENGLYVKGGSCKVCGSKTHLVADCPVKLKKEEDDXGDGDESS 174          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1360.2744.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFT4_ECTSI3.100e-11664.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1Z5JJ88_FISSO4.960e-2441.13Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A448Z930_9STRA5.320e-2238.06Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A835ZFQ1_9STRA9.500e-2235.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2W1BVU7_HELAM1.000e-2146.30Uncharacterized protein n=3 Tax=Heliothinae TaxID=... [more]
UPI001FA092A81.550e-2146.30Uncharacterized protein n=1 Tax=Spodoptera exigua ... [more]
UPI000C13F5BA1.570e-2146.30zinc finger CCHC domain-containing protein 9-like ... [more]
A0A7E5X0Y8_TRINI1.810e-2145.63zinc finger CCHC domain-containing protein 9-like ... [more]
A0A2H1WYX6_SPOFR2.160e-2146.30SFRICE_012405 n=2 Tax=Spodoptera frugiperda TaxID=... [more]
A0A7S3VAT3_9STRA3.970e-2138.01Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 117..133
e-value: 0.071
score: 18.3
coord: 145..161
e-value: 0.01
score: 23.6
coord: 94..110
e-value: 0.44
score: 13.4
coord: 172..188
e-value: 1.4
score: 10.3
NoneNo IPR availableGENE3D4.10.60.10coord: 63..138
e-value: 2.0E-9
score: 39.0
NoneNo IPR availableGENE3D4.10.60.10coord: 139..190
e-value: 1.6E-8
score: 36.2
IPR042246Zinc finger CCHC domain-containing protein 9PANTHERPTHR46242FAMILY NOT NAMEDcoord: 20..216
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 138..189
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 85..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1360contigL-elsbetiae_contig1360:8717..13420 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1360.2744.1mRNA_L-elsbetiae_contig1360.2744.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1360 8201..13464 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1360.2744.1 ID=prot_L-elsbetiae_contig1360.2744.1|Name=mRNA_L-elsbetiae_contig1360.2744.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=339bp
MASTKRPLEEISQGPTSELSKTERRRLAKKAKKERQGKTTGGGAAGKGGV
AAKAAKKGPKPKMTKEERRAKYTQKAYEARERQNQLGPGANKTRCLGCRA
WGHIVANCPEAKAATGICFNCGSSKHALRVCPKSKQKDGSLPHATCFVCK
EKGHISAHCKQNANGVYPKGGFCKGCGSKHHLSWDCPDSTKVDKKKLNKT
DAASAAGAGKDDQSTQAGGSTSEEALGGGGREERSGGSGGDTGGATAMAG
DSKAKRRKADDGSGTPSRARGSKRPPAPRSGGDDLEDDGYYDPEDVPDAP
FEADGAEDQAWAVAGPAAGRAGVAAAAAGKKKSKVVVF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR042246ZCCHC9
IPR036875Znf_CCHC_sf