prot_L-elsbetiae_contig13599.2734.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13599.2734.1
Unique Nameprot_L-elsbetiae_contig13599.2734.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length202
Homology
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BLAST of mRNA_L-elsbetiae_contig13599.2734.1 vs. uniprot
Match: D8LCL7_ECTSI (Flagellar associated protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCL7_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 7.730e-53
Identity = 181/198 (91.41%), Postives = 186/198 (93.94%), Query Frame = 0 
Query:    3 QGNLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARLLSKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIAREACSSLSMVLRKPGKKLATLDLSCNELQDDDVRLLCVALDRNASLTSIDLRMNDISADLEDLDKIEKMVHANELRAREA 200
            QGNLIDDDLMRMLMTGLIRNSTITYLDVSHNKIT           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIAREACSSLSMVLRKPGK LATLDLSCNELQDDD+RLLCVAL+RN+SLTSIDLRMND+SADLEDL+KIEKMVHANELRAREA
Sbjct:  315 QGNLIDDDLMRMLMTGLIRNSTITYLDVSHNKITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIAREACSSLSMVLRKPGKVLATLDLSCNELQDDDIRLLCVALERNSSLTSIDLRMNDVSADLEDLEKIEKMVHANELRAREA 512
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BLAST of mRNA_L-elsbetiae_contig13599.2734.1 vs. uniprot
Match: A0A7S2S000_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S000_9STRA)

HSP 1 Score: 112 bits (280), Expect = 3.120e-26
Identity = 140/196 (71.43%), Postives = 158/196 (80.61%), Query Frame = 0 
Query:    5 NLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARLLSKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIAREACSSLSMVLRKPGKKLATLDLSCNELQDDDVRLLCVALDRNASLTSIDLRMN-DISADLED-LDKIEKMVHANELRAR 198
            NLIDDDL+RMLMTGLI+N +IT+LDVSHNKITNHG RLL+KLL    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  S+  E   +L+ VL++P   L+TLDLSCN+L   DV  L   L  N  +TSIDLRMN ++  D E+ LD I +MVH NE+ AR
Sbjct:  147 NLIDDDLLRMLMTGLIKNDSITHLDVSHNKITNHGVRLLAKLLGGQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSLGNETVGALAAVLQEPECPLSTLDLSCNDLDTQDVITLESVLSENRIMTSIDLRMNPNVGEDAEEALDSINRMVHFNEIDAR 342
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BLAST of mRNA_L-elsbetiae_contig13599.2734.1 vs. uniprot
Match: A0A835Z8G8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G8_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 3.160e-19
Identity = 111/219 (50.68%), Postives = 129/219 (58.90%), Query Frame = 0 
Query:    3 QGNLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARLLSKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------SIAREACSSLSMVLRKPGKKLATLDLSCNELQDDDVRLLCVALDRN---------------ASLTSIDLRMNDISADLEDLDKIEKMVHANELRAR 198
            +G L+DDDL+RML  GL R +T+T+LD+SHN+I +HGARLL++LL  XXXXXXXXXX                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXX        S+ RE    L  +LR PG  L  LDLS NEL DDD R L  AL+                 A + S+DLR N +SA LEDL+ IE  VHANEL  R
Sbjct:  231 RGGLVDDDLLRMLAAGLARAATLTHLDLSHNRIADHGARLLARLLCGXXXXXXXXXXALTALSLADNAIRAEGARHLGRALRENDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSLGRETAVVLGALLRSPGHGLRVLDLSSNELTDDDARTLRAALEARPAGXXXXXXXXXXXGAPIVSLDLRANRLSAGLEDLEAIEARVHANELAER 449
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BLAST of mRNA_L-elsbetiae_contig13599.2734.1 vs. uniprot
Match: A0A482UXY9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UXY9_9ARCH)

HSP 1 Score: 79.7 bits (195), Expect = 3.910e-16
Identity = 37/42 (88.10%), Postives = 42/42 (100.00%), Query Frame = 0 
Query:    6 LIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARLLSKLL 47
            +IDDDL+RMLMTGLI+N+TITYLD+SHNKITNHGARLLSKLL
Sbjct:    1 MIDDDLLRMLMTGLIKNTTITYLDMSHNKITNHGARLLSKLL 42
[Close]
BLAST of mRNA_L-elsbetiae_contig13599.2734.1 vs. uniprot
Match: F0YNH4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNH4_AURAN)

HSP 1 Score: 72.0 bits (175), Expect = 1.160e-11
Identity = 110/167 (65.87%), Postives = 129/167 (77.25%), Query Frame = 0 
Query:    3 QGNLIDDDLMRMLMTGLIR---NSTITYLDVSHNKITNHGARLLSKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIAREACSSLSMVLRKPGKKLATLDLSCNELQDDDVRLLCVALDRNASL 166
            Q NLIDDDL+RMLMTGLI+   +    YL  SHNK+TNHG RLLSKLL            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS+  E+ ++L+ +L  P  +L++LDLSCN+L + D++ + +ALD N  L
Sbjct:   97 QSNLIDDDLLRMLMTGLIKVLFHDFSIYL--SHNKVTNHGVRLLSKLLGARSVLTNLNLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMGSESANALANILADPCSRLSSLDLSCNDLTEQDLKHVMIALDENKVL 261
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BLAST of mRNA_L-elsbetiae_contig13599.2734.1 vs. uniprot
Match: J9IB95_9SPIT (Flagellar associated protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IB95_9SPIT)

HSP 1 Score: 56.2 bits (134), Expect = 7.650e-6
Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = 0 
Query:    4 GNLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARLLSK 45
            GNLIDDDL+ +L+ GL+ N TI+ LD SHNKI+N GAR ++K
Sbjct:  254 GNLIDDDLISILIKGLMLNKTISQLDFSHNKISNSGARKIAK 295
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BLAST of mRNA_L-elsbetiae_contig13599.2734.1 vs. uniprot
Match: A0A1W0ABG7_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABG7_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 9.750e-6
Identity = 117/196 (59.69%), Postives = 138/196 (70.41%), Query Frame = 0 
Query:    5 NLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARLLSKLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIAREACSSLSMVLRKPGKKLATLDLSCNELQDDDVRLLCVALDRNASLTSIDLRMNDISADLEDLDKIEKMVHANELRAREA 200
            NL+DDDL+RM+MTGLI+NST+T LD+S                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX++ R+   +L  +L  P   L  LDLS N   + DV  L   L+RN  + + DLR N I  +   L +I +++  NE+  R A
Sbjct:  235 NLLDDDLLRMIMTGLIKNSTVTTLDLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGRDTAEALCGLLFDPECPLTILDLSGNNFTESDVSALYEGLERNTKVVTFDLRQNQIPKEANVLIQIAQIIRRNEIEGRHA 430
[Close]
BLAST of mRNA_L-elsbetiae_contig13599.2734.1 vs. uniprot
Match: A0A7S3GG36_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GG36_9EUKA)

HSP 1 Score: 55.1 bits (131), Expect = 1.250e-5
Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 0 
Query:    5 NLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARLLSKLL 47
            NL+DDD +R+L TGL  N TIT LD+SHNKI + G R L+K+L
Sbjct:   75 NLLDDDKVRILATGLKDNGTITALDLSHNKIADRGTRALAKIL 117
[Close]
BLAST of mRNA_L-elsbetiae_contig13599.2734.1 vs. uniprot
Match: A0A8J8NDT2_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NDT2_HALGN)

HSP 1 Score: 55.5 bits (132), Expect = 1.380e-5
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0 
Query:    4 GNLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARLL 43
            GNLIDDDL+ +L+ GL+ N TI+ LD+SHNKI+N GAR L
Sbjct:  247 GNLIDDDLISILIKGLMLNKTISQLDLSHNKISNSGARKL 286
[Close]
BLAST of mRNA_L-elsbetiae_contig13599.2734.1 vs. uniprot
Match: A0A7S3LUM3_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3LUM3_9EUKA)

HSP 1 Score: 55.1 bits (131), Expect = 1.750e-5
Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 0 
Query:    5 NLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARLLSKLL 47
            NL+DDD +R+L TGL  N TIT LD+SHNKI + G R L+K+L
Sbjct:  212 NLLDDDKVRILATGLKDNGTITALDLSHNKIADRGTRALAKIL 254
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13599.2734.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LCL7_ECTSI7.730e-5391.41Flagellar associated protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S2S000_9STRA3.120e-2671.43Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835Z8G8_9STRA3.160e-1950.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A482UXY9_9ARCH3.910e-1688.10Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
F0YNH4_AURAN1.160e-1165.87Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
J9IB95_9SPIT7.650e-661.90Flagellar associated protein n=1 Tax=Oxytricha tri... [more]
A0A1W0ABG7_9STRA9.750e-659.69Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A7S3GG36_9EUKA1.250e-560.47Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A8J8NDT2_HALGN1.380e-565.00Uncharacterized protein n=1 Tax=Halteria grandinel... [more]
A0A7S3LUM3_9EUKA1.750e-560.47Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 22..49
e-value: 0.031
score: 23.4
coord: 50..77
e-value: 0.004
score: 26.4
coord: 78..105
e-value: 3.9E-4
score: 29.7
coord: 135..162
e-value: 0.082
score: 22.0
coord: 106..133
e-value: 30.0
score: 6.8
NoneNo IPR availablePANTHERPTHR24107FAMILY NOT NAMEDcoord: 82..178
coord: 3..146
NoneNo IPR availablePANTHERPTHR24107:SF2MAP-HOMOLOGOUS PROTEIN 1coord: 82..178
coord: 3..146
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 4..188
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 3..94
e-value: 9.1E-25
score: 88.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 95..200
e-value: 2.6E-17
score: 64.9
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 137..157
e-value: 0.014
score: 15.4
coord: 163..178
e-value: 0.43
score: 10.7
coord: 77..99
e-value: 1.5E-4
score: 21.5
coord: 22..44
e-value: 1.1E-4
score: 21.9
coord: 50..71
e-value: 0.015
score: 15.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13599contigL-elsbetiae_contig13599:419..2831 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13599.2734.1mRNA_L-elsbetiae_contig13599.2734.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13599 407..2831 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13599.2734.1 ID=prot_L-elsbetiae_contig13599.2734.1|Name=mRNA_L-elsbetiae_contig13599.2734.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp
MRQGNLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARLLSKLLGEN
SVLSTLNLADNQIHAEGGRYIGRALRSNTSLVSLNLRLNRLTDEGGRMLL
EGLHDNPTLACLNLSANSIAREACSSLSMVLRKPGKKLATLDLSCNELQD
DDVRLLCVALDRNASLTSIDLRMNDISADLEDLDKIEKMVHANELRAREA
A*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt