prot_L-elsbetiae_contig1356.2715.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1356.2715.1
Unique Name	prot_L-elsbetiae_contig1356.2715.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	231

Homology

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BLAST of mRNA_L-elsbetiae_contig1356.2715.1 vs. uniprot
Match: D7FZV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZV6_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 1.790e-33
Identity = 89/207 (43.00%), Postives = 112/207 (54.11%), Query Frame = 0

Query:   17 IQLLGFLCESNLLSDELGAVDCASIALRDETASDHDGYHDSYESILERSRPEHEGTLAGADFEVGIIPAFMAALLAVTGVVLVRKRRKRAHRQSTYFSRCDKRSKSDRPGVRYYRQVGHANNDDVLSVEGEDAYGEDRSPGDGFAGGVNHSDDDAGFSAXXXXXXXXXXXXXXXXRRGRQRGRGFREAASNIVAKVLSGGVDRTPAS 223
            + LLGFLCESNLL +ELG V+C SI +RDE +S   G H          + EH                               ++++RAHRQ  YFSR   ++K+++PGVRYYR+V H +NDDVLS+EGED+YG+  SPG  FAG    SDDD GF                     R+   GFREAASNIVA+VLSGG D+ P S
Sbjct:    1 MNLLGFLCESNLLGEELGKVECESITVRDEFSS---GEH----------QEEH-----------------------------YERKKRRAHRQRNYFSR---KNKTNKPGVRYYRKVLHVDNDDVLSIEGEDSYGQVHSPGS-FAGDFT-SDDDRGFGPDAP----------------RRPSGGFREAASNIVARVLSGGADQRPVS 144

[Close]

BLAST of mRNA_L-elsbetiae_contig1356.2715.1 vs. uniprot
Match: A0A6H5L3W1_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3W1_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 1.700e-20
Identity = 85/220 (38.64%), Postives = 110/220 (50.00%), Query Frame = 0

Query:    1 MAAAPAPWEERSPKEVIQLLGFLCESNLLSDELGAVDCASIALRDETASDHDGYHDSYESILERSRPEHEGTL-AGADFEVGIIPAFMAALLAVTGVVLVRKRRKRAHRQSTYFSRCDKRSKSDRPGVRYYRQVGHANNDDVLSVEGEDAYGEDRSPGDGFAGGVNHSDDDAGFSAXXXXXXXXXXXXXXXXRRGRQRGRGFREAASNIVAKVLSGGVDR 219
            MA A   W+ERSP+E + LLGFLCES+LLS+ELG V+C SI +RDE +S      + YESIL R R +++G L  G  ++V  I + M ALL + G V++R      H  +             RP +   RQV                     SPG  FAGG   SDDD GF                     R+   GFR+AASNIVA+VLSGG ++
Sbjct: 1314 MAPAATAWQERSPRENMNLLGFLCESDLLSEELGKVECESITVRDEFSSGEQ-QEEHYESILGRDRSDNQGFLDGGRSYKVAAIASVMVALL-LGGAVVIRLITNVTHVPTA------------RPFL--VRQV--------------------HSPGS-FAGGFT-SDDDRGFGRDAP----------------RRPSGGFRDAASNIVARVLSGGANQ 1479

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1356.2715.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1356.2715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FZV6_ECTSI	1.790e-33	43.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L3W1_9PHAE	1.700e-20	38.64	WSC domain-containing protein n=1 Tax=Ectocarpus s...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 100..230
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..79
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 80..99
None	No IPR available	TMHMM	TMhelix		coord: 80..99

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1356	contig	L-elsbetiae_contig1356:17272..26718 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1356.2715.1	mRNA_L-elsbetiae_contig1356.2715.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1356 16847..26720 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1356.2715.1 ID=prot_L-elsbetiae_contig1356.2715.1|Name=mRNA_L-elsbetiae_contig1356.2715.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=231bp
MAAAPAPWEERSPKEVIQLLGFLCESNLLSDELGAVDCASIALRDETASD
HDGYHDSYESILERSRPEHEGTLAGADFEVGIIPAFMAALLAVTGVVLVR
KRRKRAHRQSTYFSRCDKRSKSDRPGVRYYRQVGHANNDDVLSVEGEDAY
GEDRSPGDGFAGGVNHSDDDAGFSAASYGGGGGGGGGGGSSRRGRQRGRG
FREAASNIVAKVLSGGVDRTPASASPRQQA*