prot_L-elsbetiae_contig1354.2707.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1354.2707.1
Unique Nameprot_L-elsbetiae_contig1354.2707.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length69
Homology
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BLAST of mRNA_L-elsbetiae_contig1354.2707.1 vs. uniprot
Match: D7FIV7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIV7_ECTSI)

HSP 1 Score: 50.8 bits (120), Expect = 1.230e-5
Identity = 23/28 (82.14%), Postives = 24/28 (85.71%), Query Frame = 0 
Query:   38 RSPGLRVFVHPVIPVLDETRNMVKMYNR 65
            R  GLR+FVHPVIPVLDETR MVK YNR
Sbjct:  764 RERGLRIFVHPVIPVLDETRGMVKTYNR 791
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1354.2707.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIV7_ECTSI1.230e-582.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 53..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1354contigL-elsbetiae_contig1354:7829..8863 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1354.2707.1mRNA_L-elsbetiae_contig1354.2707.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1354 7693..8863 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1354.2707.1 ID=prot_L-elsbetiae_contig1354.2707.1|Name=mRNA_L-elsbetiae_contig1354.2707.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=69bp
TAGRASLLPSRNSATRPPRRARSTRSASASRWPGLWRRSPGLRVFVHPVI
PVLDETRNMVKMYNRTAD*
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