prot_L-elsbetiae_contig13529.2699.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13529.2699.1
Unique Nameprot_L-elsbetiae_contig13529.2699.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length198
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig13529.2699.1 vs. uniprot
Match: A0A6H5L7F0_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F0_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 3.280e-32
Identity = 70/104 (67.31%), Postives = 83/104 (79.81%), Query Frame = 0 
Query:   94 REATFNR--LSCSKRNNGDDNRLN-GDG-DAALSITTFNVLAPIFKRVGTGRESEFREAYLERHTAIIEHLKSVGSDVICLQELWIAEQEMVDMYQRCVYRERM 193
            R +TF+   + C K +  DDNR++ GDG D  LSITTFNVLAPIFKRVG GRESEFRE YLERH AI++H+K VGSDV+CLQELW+AEQEMVDMY+R +   RM
Sbjct:   86 RSSTFSDSFVRCDKES--DDNRVDRGDGGDETLSITTFNVLAPIFKRVGNGRESEFRETYLERHKAILKHIKGVGSDVVCLQELWVAEQEMVDMYRRGLRGYRM 187
[Close]
BLAST of mRNA_L-elsbetiae_contig13529.2699.1 vs. uniprot
Match: D7G0H3_ECTSI (Carbon catabolite repressor protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0H3_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 8.150e-31
Identity = 64/86 (74.42%), Postives = 73/86 (84.88%), Query Frame = 0 
Query:  110 DDNRLN-GDG-DAALSITTFNVLAPIFKRVGTGRESEFREAYLERHTAIIEHLKSVGSDVICLQELWIAEQEMVDMYQRCVYRERM 193
            DD R++ GDG D  LSITTFNVLAPIFKRVG GRESEFRE YLERH AI++H+K VGSDV+CLQELW+AEQEMVDMY+R +   RM
Sbjct:   60 DDKRVDCGDGGDETLSITTFNVLAPIFKRVGNGRESEFRETYLERHKAILKHIKGVGSDVVCLQELWVAEQEMVDMYRRGLRGYRM 145
[Close]
BLAST of mRNA_L-elsbetiae_contig13529.2699.1 vs. uniprot
Match: UPI00053F6FC4 (uncharacterized calcium-binding protein At1g02270-like n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F6FC4)

HSP 1 Score: 81.3 bits (199), Expect = 1.630e-14
Identity = 37/66 (56.06%), Postives = 52/66 (78.79%), Query Frame = 0 
Query:  122 LSITTFNVLAPIFKRVGTG-RESEFREAYLERHTAIIEHLKSVGSDVICLQELWIAEQEMVDMYQR 186
            +S TTFN+LAPI+KR+G G RESEFREA+L R+ +I++ L  + S VICLQE W+  +E+V MY++
Sbjct:   60 ISCTTFNILAPIYKRLGGGVRESEFREAWLSRNQSILDRLLHLKSSVICLQEFWVDNEELVGMYEK 125
[Close]
BLAST of mRNA_L-elsbetiae_contig13529.2699.1 vs. uniprot
Match: A0A7C9A3V8_OPUST (EF-hand domain-containing protein n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9A3V8_OPUST)

HSP 1 Score: 77.4 bits (189), Expect = 3.400e-13
Identity = 35/66 (53.03%), Postives = 50/66 (75.76%), Query Frame = 0 
Query:  122 LSITTFNVLAPIFKRVGTG-RESEFREAYLERHTAIIEHLKSVGSDVICLQELWIAEQEMVDMYQR 186
            +S TTFN+LAPI+KR+G G RESEFRE++  R+ +I++ L  + S VICLQE W+  +E+  MYQ+
Sbjct:   22 ISCTTFNILAPIYKRLGGGVRESEFRESWRSRNESILDTLLRLKSSVICLQEFWVGNEELAGMYQK 87
[Close]
BLAST of mRNA_L-elsbetiae_contig13529.2699.1 vs. uniprot
Match: A0A1U7Z2P5_NELNU (uncharacterized calcium-binding protein At1g02270-like isoform X4 n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U7Z2P5_NELNU)

HSP 1 Score: 76.3 bits (186), Expect = 4.550e-13
Identity = 35/78 (44.87%), Postives = 54/78 (69.23%), Query Frame = 0 
Query:  110 DDNRLNGDGDAALSITTFNVLAPIFKRVGTGR-ESEFREAYLERHTAIIEHLKSVGSDVICLQELWIAEQEMVDMYQR 186
            ++  LN +    +S TTFN+LAPI+KR+ + R ES+FRE +L R+  I+E L  + S +ICLQE W+  +E+V MY++
Sbjct:   17 EEQHLNANHLGDISCTTFNILAPIYKRLNSERRESDFREYWLSRNECILERLLHLKSSIICLQEFWVGNEELVGMYEK 94
[Close]
BLAST of mRNA_L-elsbetiae_contig13529.2699.1 vs. uniprot
Match: UPI001929ED3E (uncharacterized calcium-binding protein At1g02270-like isoform X1 n=3 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929ED3E)

HSP 1 Score: 77.0 bits (188), Expect = 4.740e-13
Identity = 37/78 (47.44%), Postives = 53/78 (67.95%), Query Frame = 0 
Query:  113 RLNGDGDAALSITTFNVLAPIFKRVGTG----RESEFREAYLERHTAIIEHLKSVGSDVICLQELWIAEQEMVDMYQR 186
            R  G G+  +S TTFN+LAPI+KR+ T     RESE R  +L R+ +II+ L    S +ICLQE+W+  +E+VDMY++
Sbjct:   17 RTMGGGERCVSCTTFNILAPIYKRLDTEDQSLRESEHRAYWLSRNESIIDRLLCDRSSIICLQEVWLGNEELVDMYEK 94
[Close]
BLAST of mRNA_L-elsbetiae_contig13529.2699.1 vs. uniprot
Match: A0A4S4DTX4_CAMSI (Uncharacterized protein n=1 Tax=Camellia sinensis var. sinensis TaxID=542762 RepID=A0A4S4DTX4_CAMSI)

HSP 1 Score: 75.1 bits (183), Expect = 7.970e-13
Identity = 33/66 (50.00%), Postives = 50/66 (75.76%), Query Frame = 0 
Query:  122 LSITTFNVLAPIFKRV-GTGRESEFREAYLERHTAIIEHLKSVGSDVICLQELWIAEQEMVDMYQR 186
            +S TTFN+LAPI+KR+ G   ESEFRE +L R+ +I++ L ++ S +ICLQE W+  +E+V MY++
Sbjct:   24 VSCTTFNILAPIYKRLNGQNCESEFRELWLSRNESILDRLLTLSSSIICLQEFWVHNEELVTMYEK 89
[Close]
BLAST of mRNA_L-elsbetiae_contig13529.2699.1 vs. uniprot
Match: A0A1U7Z070_NELNU (uncharacterized calcium-binding protein At1g02270-like isoform X1 n=3 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U7Z070_NELNU)

HSP 1 Score: 76.3 bits (186), Expect = 8.840e-13
Identity = 35/78 (44.87%), Postives = 54/78 (69.23%), Query Frame = 0 
Query:  110 DDNRLNGDGDAALSITTFNVLAPIFKRVGTGR-ESEFREAYLERHTAIIEHLKSVGSDVICLQELWIAEQEMVDMYQR 186
            ++  LN +    +S TTFN+LAPI+KR+ + R ES+FRE +L R+  I+E L  + S +ICLQE W+  +E+V MY++
Sbjct:   17 EEQHLNANHLGDISCTTFNILAPIYKRLNSERRESDFREYWLSRNECILERLLHLKSSIICLQEFWVGNEELVGMYEK 94
[Close]
BLAST of mRNA_L-elsbetiae_contig13529.2699.1 vs. uniprot
Match: UPI0010360AE3 (uncharacterized calcium-binding protein At1g02270-like isoform X1 n=2 Tax=Camellia sinensis TaxID=4442 RepID=UPI0010360AE3)

HSP 1 Score: 75.1 bits (183), Expect = 1.630e-12
Identity = 33/66 (50.00%), Postives = 50/66 (75.76%), Query Frame = 0 
Query:  122 LSITTFNVLAPIFKRV-GTGRESEFREAYLERHTAIIEHLKSVGSDVICLQELWIAEQEMVDMYQR 186
            +S TTFN+LAPI+KR+ G   ESEFRE +L R+ +I++ L ++ S +ICLQE W+  +E+V MY++
Sbjct:   24 VSCTTFNILAPIYKRLNGQNCESEFRELWLSRNESILDRLLTLSSSIICLQEFWVHNEELVTMYEK 89
[Close]
BLAST of mRNA_L-elsbetiae_contig13529.2699.1 vs. uniprot
Match: A0A7J7GA08_CAMSI (EF-hand domain-containing protein n=2 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7GA08_CAMSI)

HSP 1 Score: 75.1 bits (183), Expect = 1.860e-12
Identity = 33/66 (50.00%), Postives = 50/66 (75.76%), Query Frame = 0 
Query:  122 LSITTFNVLAPIFKRV-GTGRESEFREAYLERHTAIIEHLKSVGSDVICLQELWIAEQEMVDMYQR 186
            +S TTFN+LAPI+KR+ G   ESEFRE +L R+ +I++ L ++ S +ICLQE W+  +E+V MY++
Sbjct:   34 VSCTTFNILAPIYKRLNGQNCESEFRELWLSRNESILDRLLTLSSSIICLQEFWVHNEELVTMYEK 99
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13529.2699.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7F0_9PHAE3.280e-3267.31Endo/exonuclease/phosphatase domain-containing pro... [more]
D7G0H3_ECTSI8.150e-3174.42Carbon catabolite repressor protein, putative n=1 ... [more]
UPI00053F6FC41.630e-1456.06uncharacterized calcium-binding protein At1g02270-... [more]
A0A7C9A3V8_OPUST3.400e-1353.03EF-hand domain-containing protein n=2 Tax=Opuntia ... [more]
A0A1U7Z2P5_NELNU4.550e-1344.87uncharacterized calcium-binding protein At1g02270-... [more]
UPI001929ED3E4.740e-1347.44uncharacterized calcium-binding protein At1g02270-... [more]
A0A4S4DTX4_CAMSI7.970e-1350.00Uncharacterized protein n=1 Tax=Camellia sinensis ... [more]
A0A1U7Z070_NELNU8.840e-1344.87uncharacterized calcium-binding protein At1g02270-... [more]
UPI0010360AE31.630e-1250.00uncharacterized calcium-binding protein At1g02270-... [more]
A0A7J7GA08_CAMSI1.860e-1250.00EF-hand domain-containing protein n=2 Tax=Camellia... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 92..195
e-value: 8.6E-6
score: 26.7
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 119..173
NoneNo IPR availablePANTHERPTHR12121:SF31coord: 119..187
NoneNo IPR availablePANTHERPTHR12121CARBON CATABOLITE REPRESSOR PROTEIN 4coord: 119..187
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 51..197
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..50
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 33..50
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..32
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13529contigL-elsbetiae_contig13529:1020..2784 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13529.2699.1mRNA_L-elsbetiae_contig13529.2699.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13529 450..2904 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13529.2699.1 ID=prot_L-elsbetiae_contig13529.2699.1|Name=mRNA_L-elsbetiae_contig13529.2699.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=198bp
MPRMTLRRRLRPGVPKLVSGLVVLVMQLFTCCDAFFGMSGGAAFSSSCWR
SKKRGGRQTICSSRRESPKRFPSGRGNGLCNINNNNNNNNNSGREATFNR
LSCSKRNNGDDNRLNGDGDAALSITTFNVLAPIFKRVGTGRESEFREAYL
ERHTAIIEHLKSVGSDVICLQELWIAEQEMVDMYQRCVYRERMHAFS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf